Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g0932 ATGGACGGCGGTGCTCCGTACAATCCACGTACCGTGGAAGAGGTGTTTAGGGATTTCAAGGGCCGTAGAGCTGGTTTAATTAAGGCTCTAACTACTGATGTTGAAGAGTTCTACCAGCAATGTGATCCTGAGAAAGAAAATCTTTGCCTTTACGGATTTCCTAGTGAGCAGTGGGAAGTCAATCTACCTGCGGAAGAGGTGCCTCCGGAGCTTCCAGAACCTGCGCTGGGCATAAATTTTGCTAGAGATGGGATGCAAGAAAAGGACTGGCTATCTTTGGTTGCAGTGCATAGTGATGTTTGGCTGCTCTCTGTGGCATTTTATTTTGGAGCTAGGTTTGGATTTGATAAGACAGATAGGAAGCGTCTATTTAATATGATAAATGATCTTCCAACAATATTTGAAGTGGTGACAGGGACAGCCAAAAAACAAGTTAAGGATAAATCATCAGTTTCAAATCATAGCAGTAATAAATCTAAATCAAATCCAAAGCGGAGTTCCGAACCTCAAATAAAAAATACAAAAGCTGTTCAATCGAAGGACGAGGACGAGGAAGGCTTGGAAGAGGAAGACGAGGAAGAACATGGAGAAACACTTTGTGGAGCTTGTGGAGAGAATTATGCATCTGATGAGTTTTGGATTTGCTCAACAAGAGAATCCGACCCTGATGTGGTTTACATCAAGCACGTGTGGATACCTTTCTCTATTGTACGGGATGTTCGGGTCACGGGTGCAACAAGGAGAGATTTGGTTCGTTTGTGCGGTTCGTTATGCGTTGAAGTGGATAAGAGTGCTTTCAAAGGCAAGAAGAGTGGCGCGCATCTCATATCAGCCGAGGTTGTCTTCGGCCAGTTAGCGCTTGAGGGGCCATCTTTTGATAAACTCAGGAGGACGATTCTTTGTTCCATGAACATAGGCAGTGGTGGCCATGGCCGTCGATGGTGGTGGTTTTTGGCAGTGGGCGGTGCTCGTGCGGTTGCTAGATCTGCTCAATTTCCTCTTCATATATGGTTACTTGATGCTATGGAGGGTCCTACCCCCATTTCGGCTCTTATACATGCTGTTACGATGGTAGCAGCGGGAATTTTTCTTGTCGCTCGACTTCTTCTGCTTTTTATAGTAATACCTTACATCATGAATCTAATCTTTCAGGTGGGAGGATTCGAACCGCAAACCTTGTGGTCGCTAACATCTGATTAG 1200 45.0 MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKNTKAVQSKDEDEEGLEEEDEEEHGETLCGACGENYASDEFWICSTRESDPDVVYIKHVWIPFSIVRDVRVTGATRRDLVRLCGSLCVEVDKSAFKGKKSGAHLISAEVVFGQLALEGPSFDKLRRTILCSMNIGSGGHGRRWWWFLAVGGARAVARSAQFPLHIWLLDAMEGPTPISALIHAVTMVAAGIFLVARLLLLFIVIPYIMNLIFQVGGFEPQTLWSLTSD 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22526059 22535512 + CrPI670011_08g009320.1 Cre08g0932 505850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g0932 399 Pfam Alfin 11 138 IPR021998 GO:0006355(InterPro)|GO:0042393(InterPro)
Cre08g0932 399 Pfam Proton-conducting membrane transporter 325 386 IPR001750 -
Cre08g0932 399 PANTHER CPG BINDING PROTEIN 8 216 IPR045104 GO:0000976(PANTHER)|GO:0003712(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0042393(InterPro)
Cre08g0932 399 MobiDBLite consensus disorder prediction 145 195 - -
Cre08g0932 399 PRINTS NADH-ubiquinone oxidoreductase chain 5 signature 346 372 - -
Cre08g0932 399 PRINTS NADH-ubiquinone oxidoreductase chain 5 signature 324 345 - -
Cre08g0932 399 MobiDBLite consensus disorder prediction 145 174 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1798 Cre-Chr3:34815448 Cre08g0932 Cre-Chr8:22526059 7.30E-35 dispersed
Cre08g0932 Cre-Chr8:22526059 Cre09g0076 Cre-Chr9:1041870 2.80E-88 dispersed
Cre08g0932 Cre-Chr8:22526059 Cre11g0655 Cre-Chr11:3648964 1.90E-100 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g0932 K26274 - csv:101208889 377.867