Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre08g0946 | ATGGAGGAAGAGGAAACCGGAGAGGCTATGCGGCCGGAATTTCCGACGGGGCGAGTGAAGAAGATAATGAAGCTCGACAAGGATATTGGCAAAGTGAATTCAGAAGCCCTGTTTCTAGTCTCATGCGCCACCGAGCTCTTCCTCAAGCTTCTCGCTGAAAAATCTGCAGAAGTCGCCGCTGAGAAGAAACGGAAAACCGTGAAGCTTGAACACATCCGAATCGCCGCCAAAAGGCATCGATCGATTAGTGATTTTCTACTCGATTCGCTTCCTCTTCCTTCTCAGCGGTCGGATGCGCCGGCAAAGGACGAGAATCGCACTCGCACTGTCGTTGATAAAGTGGCTCCTGAAGGAACCCGTCGAATCGATGATTTCTTTCGCCGGCCAGCAAAGACAACGTCGGCGGAGACCAACGAGTCATAG | 423 | 52.01 | MEEEETGEAMRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAAKRHRSISDFLLDSLPLPSQRSDAPAKDENRTRTVVDKVAPEGTRRIDDFFRRPAKTTSAETNES | 140 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 22639095 | 22639517 | + | CrPI670011_08g009460.1 | Cre08g0946 | 505864 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre08g0946 | 140 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 9 | 106 | IPR050568 | GO:0000976(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER) | |
Cre08g0946 | 140 | MobiDBLite | consensus disorder prediction | 90 | 114 | - | - | |
Cre08g0946 | 140 | MobiDBLite | consensus disorder prediction | 99 | 114 | - | - | |
Cre08g0946 | 140 | Gene3D | Histone, subunit A | 1 | 91 | IPR009072 | GO:0046982(InterPro) | |
Cre08g0946 | 140 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 13 | 75 | IPR003958 | - | |
Cre08g0946 | 140 | SUPERFAMILY | Histone-fold | 13 | 91 | IPR009072 | GO:0046982(InterPro) | |
Cre08g0946 | 140 | MobiDBLite | consensus disorder prediction | 121 | 140 | - | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54182 | PF00808 | CBFD_NFYB_HMF | 1.40E-19 | CL0012 | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre08g0946 | - | - | - | 0.0 |