Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre08g0967 | ATGGCTGATTCACCTCCTCCCCCTCCCTTCTCCACCGCCGATTCCTCCACTAATTCAACCGACGCTCTTTTCTTCTTCCCTCCCGATTCCGATTCCACCATCCTTACCGAATTCGGATGGAATTTCCACTCTCTTCAACCTCAACAACCTTCTCGATTCCTCCAATCTCACCGGATCGACGCCGATTTGCCTCCAACTTCCACTCCGGTAATCGATGACGCTGCCGGATTACAGAGCCCTGACGCTCCTCTTCCACTCGCCTCTAATCCTTCTTTGTCTTCTAGCTCTAGCGGAGAGCCGACGGAGAAACAGCCTGAGATTATTCCGCGGAAGGTCAAAAAGAAGGGGCAGAAGCGAATTCGGCAGCCACGATTTGCATTCATGACCAAAAGCGAAGTCGATCATCTTGAAGATGGCTACCGGTGGAGGAAATATGGACAAAAGGCTGTCAAGAACAGTCCATTCCCTAGGAGTTACTACAGGTGCACAAACAGCAAATGCACAGTGAAGAAAAGAGTAGAACGGTCTTGTGAAGATCCAAGCATTGTGATAACAACATATGAAGGACAACACTGTCATCACACCGTTGGATTCCCTCGAGGTGGATTAAACATAGCTCATGAAGCTGCTTTTGGGTCTCAATTTTCACCTCAAATCCCACAGTTTTTTTACCCTGATCATCAAACTCACTCACCACCCACAACTAACATTAACCCTCCCCCCACTCCCAATGACCAGCCACACGATTTGGCTCCATCATCATCCTCCAATGCACTATCCTTAGAACAACAAGATCCAACAAACTCAAACCTCCAAGTTCCTTCCGACGAAGGCTTGCTCGGCGCTATCGTCCCACCCGCCATGATGCGTAGAACATAA | 879 | 48.92 | MADSPPPPPFSTADSSTNSTDALFFFPPDSDSTILTEFGWNFHSLQPQQPSRFLQSHRIDADLPPTSTPVIDDAAGLQSPDAPLPLASNPSLSSSSSGEPTEKQPEIIPRKVKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSCEDPSIVITTYEGQHCHHTVGFPRGGLNIAHEAAFGSQFSPQIPQFFYPDHQTHSPPTTNINPPPTPNDQPHDLAPSSSSNALSLEQQDPTNSNLQVPSDEGLLGAIVPPAMMRRT | 292 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 22830386 | 22835196 | - | CrPI670011_08g009670.1 | Cre08g0967 | 505885 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre08g0967 | 292 | Gene3D | WRKY domain | 123 | 189 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre08g0967 | 292 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Cre08g0967 | 292 | MobiDBLite | consensus disorder prediction | 84 | 102 | - | - | |
Cre08g0967 | 292 | MobiDBLite | consensus disorder prediction | 51 | 120 | - | - | |
Cre08g0967 | 292 | FunFam | WRKY transcription factor 57 | 122 | 196 | - | - | |
Cre08g0967 | 292 | MobiDBLite | consensus disorder prediction | 221 | 279 | - | - | |
Cre08g0967 | 292 | SMART | WRKY_cls | 136 | 195 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre08g0967 | 292 | SUPERFAMILY | WRKY DNA-binding domain | 128 | 194 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre08g0967 | 292 | ProSiteProfiles | WRKY domain profile. | 131 | 196 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre08g0967 | 292 | Pfam | WRKY DNA -binding domain | 137 | 193 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre08g0967 | 292 | MobiDBLite | consensus disorder prediction | 248 | 275 | - | - | |
Cre08g0967 | 292 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 89 | 231 | IPR044810 | GO:0003700(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre04g0903 | Cre-Chr4:27684927 | Cre08g0967 | Cre-Chr8:22830386 | 3.30E-21 | dispersed | |
Cre08g0937 | Cre-Chr8:22569347 | Cre08g0967 | Cre-Chr8:22830386 | 4.60E-23 | dispersed | |
Cre08g0967 | Cre-Chr8:22830386 | Cre10g1316 | Cre-Chr10:26507672 | 2.50E-33 | dispersed | |
Cre08g0967 | Cre-Chr8:22830386 | Cre06g1206 | Cre-Chr6:5917369 | 1.60E-40 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54183 | PF03106 | WRKY | 8.80E-25 | CL0274 | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre08g0967 | - | - | - | 0.0 |