Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g0978 ATGTCTTCCGCCGAGAAGGAAAGAGAGACCCAGGTTTACATGGCCAAGCTCGCCGAGCAGGCCGAACGCTATGACGAAATGGTTGAGTGTATGAAGAATATTGCAAAACTTGACCTCGAACTAACTGTAGAGGAGAGGAACCTTCTTTCTGTGGGATACAAAAATGTCATAGGTGCCCGACGAGCTTCTTGGCGCATCATGTCTTCAATTGAGCAGAAAGAGGAGTCTAAGGGGAATGAGAACATTGTAAAATTGATAAAGAGTTACCGCCAGAAAGTGGAGGAGGAGCTTTCAAAGATTTGTGGTGACATTCTCTCTATCATAGACAAGCATCTAATCCCTCATTCGTCCTCTGCAGAAGCCACCGTTTTCTACTACAAGATGAAAGGTGACTACTATCGTTATCTTGCTGAGTTCAAGACAGATCAAGATAGAAAAGAGGCTGCTGATCAATCGTTGAAGGGATATGAGGCTGCCTCAGGCACTGCGAATACCGAACTCCCATCAACCCACCCAATCCGTCTTGGCCTTGCACTCAATTTTTCTGTCTTCTACTATGAGATTATGAATTCTCCTGAGAGAGCTTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGATACCTTGAGTGAGGAATCATACAAGGACAGCACTCTGATCATGCAGCTGTTGAGAGACAACCTTACCCTCTGGACCTCAGATTTGCCTGAAGATGGCGGTGACGAAAACTTCAAAGCTGAGGAATCCAAACCTGCGGAACCTGAGGCTCAGCAAGCCAAATGA 795 45.79 MSSAEKERETQVYMAKLAEQAERYDEMVECMKNIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENIVKLIKSYRQKVEEELSKICGDILSIIDKHLIPHSSSAEATVFYYKMKGDYYRYLAEFKTDQDRKEAADQSLKGYEAASGTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGDENFKAEESKPAEPEAQQAK 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22915643 22918432 - CrPI670011_08g009780.1 Cre08g0978 505896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g0978 264 PIRSF 14-3-3 2 248 IPR000308 -
Cre08g0978 264 Pfam 14-3-3 protein 14 236 IPR023410 -
Cre08g0978 264 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Cre08g0978 264 Coils Coil 14 34 - -
Cre08g0978 264 SMART 1433_4 8 249 IPR023410 -
Cre08g0978 264 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Cre08g0978 264 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Cre08g0978 264 PANTHER 14-3-3 PROTEIN 7 241 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cre08g0978 264 MobiDBLite consensus disorder prediction 238 264 - -
Cre08g0978 264 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Cre08g0978 264 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Cre08g0978 264 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Cre08g0978 264 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Cre08g0978 264 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Cre08g0978 264 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Cre08g0978 264 MobiDBLite consensus disorder prediction 242 258 - -
Cre08g0978 264 FunFam 14-3-3 protein epsilon 3 250 - -
Cre08g0978 264 Gene3D - 1 249 IPR036815 -
Cre08g0978 264 Coils Coil 196 216 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2547 Cre-Chr5:36747386 Cre08g0978 Cre-Chr8:22915643 2.00E-130 dispersed
Cre07g0637 Cre-Chr7:4158873 Cre08g0978 Cre-Chr8:22915643 4.60E-109 dispersed
Cre08g0978 Cre-Chr8:22915643 Cre11g1836 Cre-Chr11:29998120 2.30E-102 dispersed
Cre08g0978 Cre-Chr8:22915643 Cre08g1047 Cre-Chr8:23632186 2.60E-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g0978 K06630 - csv:101221858 511.531