Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g0985 ATGCCGAGCATTTCGGCCCTCTATTCCATTCAAGAAGTCTCACAGCACAGTTCCAACGACGACTGTTGGATCATTATCGATGGCAAGGTATATGATTTGACTTCATATTTGGATGAGCATCCCGGTGGAGATGATGTTATTGTGGCTGCAACTGGCAGAGATGCCACAGATGATTTTGAAGATGCTGGTCATAGCAAAGACGCCAGAGAGTTGATGGAGAAGTTCTATATCGGCGTGCTTGATACATATCCCTCGGATAGCCTAGAACTTGAAACGAAACAAGTAGACGGTTATGCAGCTCGGTTTCAGGCCTTGACAAAGCAATACTGGAAGGCTCCTGTTGCAGTACTTGGTATTTCTGTGGTAGTTGGCTGTCTATACTTGCGCAAGAAGTGA 396 45.71 MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTYPSDSLELETKQVDGYAARFQALTKQYWKAPVAVLGISVVVGCLYLRKK 131
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22964277 22966105 + CrPI670011_08g009850.1 Cre08g0985 505903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g0985 131 SMART Cyt_b5_2 8 81 IPR001199 -
Cre08g0985 131 Gene3D - 3 84 IPR036400 -
Cre08g0985 131 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cre08g0985 131 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cre08g0985 131 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cre08g0985 131 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cre08g0985 131 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Cre08g0985 131 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 81 IPR001199 -
Cre08g0985 131 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 83 IPR036400 -
Cre08g0985 131 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Cre08g0985 131 PANTHER CYTOCHROME B5 6 129 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Cre08g0985 131 FunFam Cytochrome b5 type B 3 85 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g0985 Cre-Chr8:22964277 Cre09g2485 Cre-Chr9:44142096 4.40E-22 dispersed
Cre08g0985 Cre-Chr8:22964277 Cre05g0427 Cre-Chr5:3865275 1.30E-26 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g0985 K23490 - csv:101220127 240.736