Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre08g1025 | ATGGCGTTGCAGAATATTGGTGCCTCAAACCGTGATGATGCCTTCTATAGGTATAAGATGCCTAAGATGGTTACTAAAATTGAAGGTAGAGGTAATGGCATCAAGACTAATGTAGTTAACATGGTGGAAATTGCAAAAGCCTTGGGCAGACCTGCCTCTTACACTACCAAGTACTTTGGATGTGAGCTTGGTGCGCAATCCAAGTTCGATGAGAAAACCGGGACGTCTCTTGTAAATGGTGCTCATGAGACAGCAAAGCTGGCTGGTCTTCTTGAAAATTTCATAAAAAAATATGTTCAATGCTATGGATGTGGAAACCCTGAGACTGAGATAATCATCACAAAGACGCAGATGATCACTATGAAATGTGCTGCCTGTGGATTCATATCTGATGTTGACATGAGAGATAAACTCACAACGTTTATTCTCAAGAATCCTCCTGAACAGAAGAAGGGATCGAAAGACAAGAAAGCAATGAGGAGGGCTGAGAAGGAACGACTTAAGGAGGGAGAGGTTGCCGATGAGGAGCAGAAGAAAATAAAGAAGGATTCGCTAAAGAAGAAAAGCACTAGTAGTACTACAAAGGATGCTGTAACCAAAGTTCCAAGCAAGAAAAAGAATAATGGTTCAGATGAGGATCATTCTCCAACTCGCAGTCATGCTGGTGATAATGACCAAGCAGATGATGACGATGATGACGACGATGTTCAGTGGCAAACAGACACTTCTCTAGAGGCAGCCAAACAGCGTATCCAGGAGCAGCTGAGTGCTGTCACTGCTGATATGGTCATGCTCTCTACTACCGAAGAGAATAAGTCGTCAAAGAAGTCCCCCGAGCACGAGAAGTCTGCAGTCAATGGAACCAAGAATGGAAATGGAGTTTCTACCCATGGTGCCCTCGTTCAAGAGATCAAAGAGTATTTGAAGAAAGGTTCCTCTGCAGCCGATCTCAAATCATTCTTGGAATCACTTTCTGGAACTCGCCAAGAGATTGTGAATGCCTTAGTTGAGTCTCTGTTCGATGGCGTTGGGAAAGGCTTCTCAAAGGAGGTAGTGAAAAAGAAGAAGTTCCTAGCTGCAGCTGCCGCTCAGGAGGGATCACAGATAGTTCTTTTACGCGCCATCGAATCTTTCTGTCTGAACACAAGTCCAGAGGCGGGTAAGGAGGTTGCTCTAGTCCTGAAATCGTTATATGACGGTGATGTAATAGAGGAGGAATTCGTACTAGAGTGGTACCAGCAGGGCGTGGCTGGTGCTAACAAAAGCTCTCAAATCTGGAAGTATGTAAAGCCCTTCATCGAATGGCTCCAGAATGCTGAGTCGGAGACGGAAGAAGAATAA | 1341 | 44.59 | MALQNIGASNRDDAFYRYKMPKMVTKIEGRGNGIKTNVVNMVEIAKALGRPASYTTKYFGCELGAQSKFDEKTGTSLVNGAHETAKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITMKCAACGFISDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEVADEEQKKIKKDSLKKKSTSSTTKDAVTKVPSKKKNNGSDEDHSPTRSHAGDNDQADDDDDDDDVQWQTDTSLEAAKQRIQEQLSAVTADMVMLSTTEENKSSKKSPEHEKSAVNGTKNGNGVSTHGALVQEIKEYLKKGSSAADLKSFLESLSGTRQEIVNALVESLFDGVGKGFSKEVVKKKKFLAAAAAQEGSQIVLLRAIESFCLNTSPEAGKEVALVLKSLYDGDVIEEEFVLEWYQQGVAGANKSSQIWKYVKPFIEWLQNAESETEEE | 446 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 23411267 | 23412607 | - | CrPI670011_08g010250.1 | Cre08g1025 | 505943 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre08g1025 | 446 | Pfam | eIF4-gamma/eIF5/eIF2-epsilon | 368 | 446 | IPR003307 | GO:0005515(InterPro) | |
Cre08g1025 | 446 | Gene3D | - | 105 | 145 | - | - | |
Cre08g1025 | 446 | SUPERFAMILY | ARM repeat | 299 | 440 | IPR016024 | - | |
Cre08g1025 | 446 | SUPERFAMILY | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 10 | 101 | IPR016189 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cre08g1025 | 446 | Gene3D | - | 2 | 104 | - | - | |
Cre08g1025 | 446 | FunFam | Eukaryotic translation initiation factor 5 | 105 | 145 | - | - | |
Cre08g1025 | 446 | MobiDBLite | consensus disorder prediction | 143 | 237 | - | - | |
Cre08g1025 | 446 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 3 | 442 | IPR045196 | GO:0001731(PANTHER)|GO:0001732(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0005092(PANTHER)|GO:0005829(PANTHER)|GO:0006413(InterPro)|GO:0071074(PANTHER) | |
Cre08g1025 | 446 | SMART | 542_3 | 355 | 442 | IPR003307 | GO:0005515(InterPro) | |
Cre08g1025 | 446 | SMART | eIF2Bneu4 | 15 | 129 | IPR002735 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cre08g1025 | 446 | Gene3D | - | 294 | 437 | - | - | |
Cre08g1025 | 446 | MobiDBLite | consensus disorder prediction | 148 | 190 | - | - | |
Cre08g1025 | 446 | MobiDBLite | consensus disorder prediction | 199 | 225 | - | - | |
Cre08g1025 | 446 | Pfam | Domain found in IF2B/IF5 | 11 | 127 | IPR002735 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cre08g1025 | 446 | SUPERFAMILY | Zinc-binding domain of translation initiation factor 2 beta | 98 | 133 | IPR016190 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cre08g1025 | 446 | CDD | W2_eIF5 | 295 | 444 | - | - | |
Cre08g1025 | 446 | ProSiteProfiles | W2 domain profile. | 287 | 446 | IPR003307 | GO:0005515(InterPro) | |
Cre08g1025 | 446 | FunFam | Eukaryotic translation initiation factor 5 | 1 | 104 | - | - | |
Cre08g1025 | 446 | MobiDBLite | consensus disorder prediction | 268 | 295 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre08g1025 | K03262 | - | csv:101210873 | 739.954 |