Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g1047 ATGTTCCCGCGCACTTCGAAGCCCAGCCCTGGTTTTGTGCTGCCGGCGTCCCCCACATGGACAGTCACCAACGCCTTTTACTTTTGGTCTCATTTCCTCCTTTGTGTTTCCCATCACGCGCCGGATTCAACGCAGCAGCAGCAACAAGAAGAATCAAGCCAAAAACACAGCCAAAAAGGCATTTCTCGGACGGAGAAATTCCACAGAGCTCCGGCCATGGAGAAGGAGAGAGAGCACCTTGTTTACTTGGCTAGACTTGCAGAACAAGCTGAGAGATATGATGAAATGGTGGAAATGATGAAAAGCGTTGCAAAGTTGGATGTAGAACTTACTGTGGAGGAGAGGAACCTGGTCTCTGTGGGATATAAGAATGTTATTGGAGCAAGAAGAGCCTCATGGCGTATTTTATCTTCTATTGAACAAAAGGAGGAAGGAAAGAAGAACGAGGTTAATGTGAAGAGGGTAAAGGAGTACAGGCAGAGGGTTGAAGACGAACTGGCGAGAATTTGCCAGGACATCTTAACTGTTGTTGACAAGCATCTCATTCCATCTTCATCCTCTGGAGAATCCAATGTTTTTTACTATAAGATGAAGGGGGATTATAACCGATACTTAGCGGAGTTTAAATCTGGCCGTGAACGTGAAGAAGCTGCAGACCAGTCGATGAAGGCCTATGAGTCTGCCTCAAGCATTGCAAGCTCTGATCTGCCTCCAACACACCCCATCAGACTTGGCTTGGCGCTTAACTTTTCTGTTTTCTACTATGAGATATTAAATTCCCCAGAGAGGGCGTGCCACCTTGCTAAACAAGCTTTTGATGATGCCATAGCTGAACTCGACGGCCTCAATGAAGAATCCTACAAGGACAGTACCCTCATTATGCAGCTGCTGAGGGATAATCTAACGTTATGGACCTCAGATCTCCCAGATGAGGGAGGTGAGCAATCTAAAGCTGCTGATGAACCTTGA 969 46.65 MFPRTSKPSPGFVLPASPTWTVTNAFYFWSHFLLCVSHHAPDSTQQQQQEESSQKHSQKGISRTEKFHRAPAMEKEREHLVYLARLAEQAERYDEMVEMMKSVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEGKKNEVNVKRVKEYRQRVEDELARICQDILTVVDKHLIPSSSSGESNVFYYKMKGDYNRYLAEFKSGREREEAADQSMKAYESASSIASSDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDDAIAELDGLNEESYKDSTLIMQLLRDNLTLWTSDLPDEGGEQSKAADEP 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 23632186 23635040 - CrPI670011_08g010470.1 Cre08g1047 505965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g1047 322 PRINTS 14-3-3 protein zeta signature 158 182 IPR000308 -
Cre08g1047 322 PRINTS 14-3-3 protein zeta signature 189 211 IPR000308 -
Cre08g1047 322 PRINTS 14-3-3 protein zeta signature 278 307 IPR000308 -
Cre08g1047 322 PRINTS 14-3-3 protein zeta signature 109 138 IPR000308 -
Cre08g1047 322 PRINTS 14-3-3 protein zeta signature 251 277 IPR000308 -
Cre08g1047 322 PRINTS 14-3-3 protein zeta signature 224 250 IPR000308 -
Cre08g1047 322 SMART 1433_4 77 318 IPR023410 -
Cre08g1047 322 FunFam 14-3-3 protein epsilon 73 318 - -
Cre08g1047 322 Pfam 14-3-3 protein 83 305 IPR023410 -
Cre08g1047 322 ProSitePatterns 14-3-3 proteins signature 1. 115 125 IPR023409 -
Cre08g1047 322 Gene3D - 51 318 IPR036815 -
Cre08g1047 322 ProSitePatterns 14-3-3 proteins signature 2. 287 306 IPR023409 -
Cre08g1047 322 MobiDBLite consensus disorder prediction 43 67 - -
Cre08g1047 322 PANTHER 14-3-3 PROTEIN 76 310 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cre08g1047 322 SUPERFAMILY 14-3-3 protein 76 307 IPR036815 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g1047 Cre-Chr8:23632186 Cre08g1063 Cre-Chr8:23757153 6.40E-91 dispersed
Cre05g2547 Cre-Chr5:36747386 Cre08g1047 Cre-Chr8:23632186 1.60E-108 transposed
Cre07g0637 Cre-Chr7:4158873 Cre08g1047 Cre-Chr8:23632186 1.70E-111 transposed
Cre08g0978 Cre-Chr8:22915643 Cre08g1047 Cre-Chr8:23632186 2.60E-106 transposed
Cre11g1836 Cre-Chr11:29998120 Cre08g1047 Cre-Chr8:23632186 2.10E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g1047 K06630 - csv:101222677 464.922