Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g1063 ATGGCTGCCGCCCCTTCTGTTCGCGAGGAGAATGTTTACATGGCCAAGCTTGCCGAGCAGGCCGAGCGCTACGAGGAGATGGTCGAGTTCATGGAGAAGGTTTCCGCTTCCCTCGACAAGGAGGAGCTCACCGTCGAGGAGAGAAACCTCCTTTCTGTCGCCTACAAGAACGTCATCGGCGCTCGCAGGGCTTCCTGGCGTATCATTTCCTCCATCGAACAAAAGGAGGAGAGCCGAGGCAACGACGACCATGTCTCTGTGATCCGTGACTACAGATCCAAAATTGAGACCGAACTCTCCAATATTTGCGATGGAATCCTCAAGCTTCTCGATTCCAGACTCATTCCCTCCGCCGCTTCCGGAGATTCCAAGGTTTTTTACCTCAAAATGAAGGGAGATTACCATAGATACCTCGCCGAATTCAAAACCGGAGCCGAACGCAAGGAAGCTGCTGAAAGCACTCTCACTGCTTACAAAGCCGCTCAGGATATTGCAAATGCTGAGTTGCCTCCTACACATCCGATCCGACTTGGATTGGCCCTTAACTTCTCTGTATTCTACTATGAAATTTTGAATTCACCTGATCGTGCCTGCAGTCTTGCAAAACAGGCGTTTGATGAAGCTATCGCTGAATTGGATACCCTTGGCGAGGAATCCTACAAAGATAGTACTTTGATCATGCAGCTTCTTCGCGATAATCTCACTCTCTGGACATCGGACATGCAGGATGATGGTGCTGATGAGATTAAAGAAGCTCCCCCCAAGCGTGAGGATGAAAAGCAGTGA 786 50.13 MAAAPSVREENVYMAKLAEQAERYEEMVEFMEKVSASLDKEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIRDYRSKIETELSNICDGILKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPPKREDEKQ 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 23757153 23758800 + CrPI670011_08g010630.1 Cre08g1063 505981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g1063 261 FunFam 14-3-3 protein epsilon 4 251 - -
Cre08g1063 261 Gene3D - 2 251 IPR036815 -
Cre08g1063 261 MobiDBLite consensus disorder prediction 243 261 - -
Cre08g1063 261 SUPERFAMILY 14-3-3 protein 8 240 IPR036815 -
Cre08g1063 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cre08g1063 261 Coils Coil 14 41 - -
Cre08g1063 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Cre08g1063 261 SMART 1433_4 8 251 IPR023410 -
Cre08g1063 261 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cre08g1063 261 MobiDBLite consensus disorder prediction 242 261 - -
Cre08g1063 261 PIRSF 14-3-3 2 250 IPR000308 -
Cre08g1063 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Cre08g1063 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cre08g1063 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cre08g1063 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cre08g1063 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cre08g1063 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cre08g1063 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g1047 Cre-Chr8:23632186 Cre08g1063 Cre-Chr8:23757153 6.40E-91 dispersed
Cre08g1063 Cre-Chr8:23757153 Cre08g1124 Cre-Chr8:24432630 6.10E-100 dispersed
Cre07g1973 Cre-Chr7:35160388 Cre08g1063 Cre-Chr8:23757153 1.60E-119 transposed
Cre11g1846 Cre-Chr11:30105296 Cre08g1063 Cre-Chr8:23757153 4.30E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g1063 K06630 - csv:101220164 508.834