Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g1124 ATGGCCGCCGCCGTGCCGGAAAATCTCTCTCGCGAGCAATATGTGTATCTAGCGAAGCTTGCCGAGCAGGCTGAAAGATATGAGGAGATGGTTCAGTTCATGCAGAAACTTGTTCTTGCTTCAACCCCAGGCTCTGAGCTCTCTGTCGAGGAGCGAAATCTTCTCTCTGTCGCTTACAAGAACGTGATTGGCTCACTTCGAGCCGCTTGGCGGATTGTCTCTTCCATCGAGCAAAAGGAGGAGAGCCGTAAGAATGAAGAGCATGTTGTTCTTGTTAAGGATTACAGATCAAAGGTTGAGGCTGAGCTTTCCGACGTCTGTGCGAGTATTTTGCAGCTTTTGGACTCGAATCTTATTCCCTCCGCCTCTGCTAGTGAGTCTAAGGTCTTCTACTTGAAGATGAAAGGGGATTACCATAGGTATTTGGCGGAGTTTAAGGTTGGGGATGAGAGGAAAGCCGCTGCTGAGGATACTATGCTGGCTTATAGAGCTGCTCAGGATGTCGCAGTTGCAGATCTTGCACCCACTCATCCGATAAGGCTAGGGCTGGCACTCAATTTCTCTGTGTTTTACTTCGAGATTCTGAATCAGTCCGATAAAGCATGTAGCATGGCCAAGGAGGCATTTGAGGAAGCCATTGCTGAACTGGACACTTTGGGTGAAGAATCATACAAGGACAGTACCCTCATCATGCAACTATTGAGGGACAACCTCACTCTCTGGACTTCAGATGCTCAGGACCAGTTAGATGAGTCATAG 759 48.48 MAAAVPENLSREQYVYLAKLAEQAERYEEMVQFMQKLVLASTPGSELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVVLVKDYRSKVEAELSDVCASILQLLDSNLIPSASASESKVFYLKMKGDYHRYLAEFKVGDERKAAAEDTMLAYRAAQDVAVADLAPTHPIRLGLALNFSVFYFEILNQSDKACSMAKEAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQDQLDES 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 24432630 24436005 + CrPI670011_08g011240.1 Cre08g1124 506042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g1124 252 SUPERFAMILY 14-3-3 protein 10 244 IPR036815 -
Cre08g1124 252 Pfam 14-3-3 protein 17 242 IPR023410 -
Cre08g1124 252 PIRSF 14-3-3 6 252 IPR000308 -
Cre08g1124 252 Gene3D - 1 252 IPR036815 -
Cre08g1124 252 PRINTS 14-3-3 protein zeta signature 126 148 IPR000308 -
Cre08g1124 252 PRINTS 14-3-3 protein zeta signature 161 187 IPR000308 -
Cre08g1124 252 PRINTS 14-3-3 protein zeta signature 95 119 IPR000308 -
Cre08g1124 252 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Cre08g1124 252 PRINTS 14-3-3 protein zeta signature 188 214 IPR000308 -
Cre08g1124 252 PRINTS 14-3-3 protein zeta signature 215 244 IPR000308 -
Cre08g1124 252 FunFam 14-3-3 protein epsilon 8 252 - -
Cre08g1124 252 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Cre08g1124 252 PANTHER 14-3-3 PROTEIN 11 247 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cre08g1124 252 Coils Coil 17 37 - -
Cre08g1124 252 ProSitePatterns 14-3-3 proteins signature 2. 224 243 IPR023409 -
Cre08g1124 252 SMART 1433_4 11 251 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g1063 Cre-Chr8:23757153 Cre08g1124 Cre-Chr8:24432630 6.10E-100 dispersed
Cre08g1124 Cre-Chr8:24432630 Cre11g1846 Cre-Chr11:30105296 5.40E-101 dispersed
Cre11g1866 Cre-Chr11:30321977 Cre08g1124 Cre-Chr8:24432630 2.80E-37 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g1124 K06630 - csv:101222827 481.1