Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g1195 ATGTGGAGTCAGAAGCAATCAATTGGTGGTAAGGAAAGGAAAGAGCTGGCCACAGGCAATCAATTAGTGGGAATCGCCATTGACAAGGATAAAGGAAGTCAAGTTGCTCTCAAATGGGCCACTGAGAATCTCCTTGTAAAGGGCCAAACTGCCATTCTCATCCACGTTAAACTCCGACCTTCCTCCTATCCTGGCTCTTCTCTCGCTACCCCTAAGGTGATGTCGGCATCTGATGCTGGCAGTGGCAATGGCAATGTTATGGTAAGCAAGGATATGGATCCGAGCACAAGGGATTTGTTCCTTCCTTTTCGCTGCTTCTGTACGCGTAAAGATATATTTTGCAAAGACATCATCCTTGAAGATTTAGACGTTGCAAAAGCGTTGATCGAATATGTCACTCAGGCTGGAATTGAGAATTTGGTTGTTGGTGCCACGACCAAAAGTGGCTTCTTGAGAAGATTCAAGACGACAGATATTCCAGGCAGTGTTGTCAAAGGAGCACCAGATTTCTGCAATGTTTATGTCATATCAAGAGGGAAAATCCAAACTATGCGATCAGCCTCACGTCCTGCTCCCGCTTTGTCTCCTCTACGAAGTTTATTGCTGAGCCAAGCTGGTATCAAATCACATTCAGCAGAGTCACCAGTTCCTCAGATTCAAAGACCTGAAAAGCCTCCCCTTGAAGCAGCACGTAGATCTCAGGACAACATCGAGTTCAGGTCGCCGTTCACTAGGAAAGGCTACAATGGAAAAATGCCAGGGGAAGTCAGTCAGCCAGATACTGATATTTCTTTCGTTAGCTCGGGAAGGCCGAGTGTTGATAGATTATTCCCTACATTGTATGACAACCTGGATACAGGAAGGGTTCCCCCACGGCTGTCCAGTGGCAACGATGCTGATATATACAATAGCTTCGAGTCACAGCAGTTCGGACGCAAATCATTGGATGTAAACTATCCACCTGAATTTTTACCGGTCTTCTCAGAAGGTGACAGATTGTCGACTTCGTCACAGAGTATGGAAGAAGTAGAGGCTGAAATGAGGAGGCTGAAGCTGGAACTAAAGCAAACCATGGAAATGTATAGCACAGCCTGCAAGGAAGCACTAACAGCTAAACAAAAGGCAATAGAGCTTCAGCGATGGAAATCTGAGGAAGAGCGTAGAATAGAGGAGGCAAGACTTGCAGAGGAAGCTGCATTAGCGATGGTTGAGCAGGAAAAGGCAAAGTCTCGAGCTGCTATTGAGGCTGCTGAGGCAGCTAAAAGGATCGCTGAGTTGGAAGCACAGAAGAGAATTAACGCGGAAAAGAAAGCATTCAAGGAAGCAGAAGAGAAGAAGAAGGCATTAGATGCTTTGGCAAACAATGATGTCAGGTATCGGAAGTACTCAATTGACGAGATTGAAACTGCTACTGAGTTCTTTTCAGAATCTTTAAAGATTGGAGAGGGAGGTTATGGGCCTGTTTATAAAGGTTATTTGGACCACACACCAGTTGCAATTAAGGTCTTACGTCCGGATGCGGCTCAAGGAAGGTCACAGTTCCAGCAAGAGGTTGAAGTACTAAGCTGCATACGACATCCTAACATGGTTCTTCTCCTTGGAGCATGCCCTGAATATGGCTGCTTGGTCTATGAGTTCATGGCACATGGTAGCTTGGATGACTGCCTCTTTCGCCGAAGAGAAAACTCAAAACCTCTTTCTTGGCAACGTAGATTCAAAATTGCAGCTGAAATTGGCACTGCCTTGTTGTTCCTCCACCAGACTAAGCCTGAGCCTCTTGTGCACCGTGATTTGAAACCGGCCAACATCTTGCTCGATCGTAACTATGTTAGCAAGATTAGCGACGTTGGTTTGGCCAGGCTTGTTCCCCCATCTGTAGCCGACAGTGTGACACAATATAGAATGACTTCAACTGCTGGCACATTCTGTTATATCGATCCCGAGTATCAACAAACGGGCATGCTTGGTGTAAAGTCCGATATATATTCATTGGGAATCATGTTTTTGCAGTTGATTACAGCAAGGGCACCCATGGGATTGACTCATCATGTGGGAAGAGCTATTGAGAAAGGGACTTTGTCGGAAATTCTTGATCCATCTGTTACCGATTGGCCAGCTGAAGAAACGTTATGCTTTGCAGAGTTGGCTTTAAAATGTGCAGAGTTGAGAAGGAAAGACCGACCTGATCTCGGTAAGGTTGTTCTCCCAGAACTCATCAGATTTCAATTGCTAGCCGAAGCCAGCATGTACACACCGGTGACGGACGGTGTTAGCAGCCCTGTGTTCAGCCACAGCCAGGTTCCTATGAGAAAAGACGGCGAATGTTTTTCCTCACAATCTAGCGATAGCCATGGAGTCTTATCGCGCTCGGCGTCATAG 2379 46.15 MWSQKQSIGGKERKELATGNQLVGIAIDKDKGSQVALKWATENLLVKGQTAILIHVKLRPSSYPGSSLATPKVMSASDAGSGNGNVMVSKDMDPSTRDLFLPFRCFCTRKDIFCKDIILEDLDVAKALIEYVTQAGIENLVVGATTKSGFLRRFKTTDIPGSVVKGAPDFCNVYVISRGKIQTMRSASRPAPALSPLRSLLLSQAGIKSHSAESPVPQIQRPEKPPLEAARRSQDNIEFRSPFTRKGYNGKMPGEVSQPDTDISFVSSGRPSVDRLFPTLYDNLDTGRVPPRLSSGNDADIYNSFESQQFGRKSLDVNYPPEFLPVFSEGDRLSTSSQSMEEVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAIELQRWKSEEERRIEEARLAEEAALAMVEQEKAKSRAAIEAAEAAKRIAELEAQKRINAEKKAFKEAEEKKKALDALANNDVRYRKYSIDEIETATEFFSESLKIGEGGYGPVYKGYLDHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMAHGSLDDCLFRRRENSKPLSWQRRFKIAAEIGTALLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITARAPMGLTHHVGRAIEKGTLSEILDPSVTDWPAEETLCFAELALKCAELRRKDRPDLGKVVLPELIRFQLLAEASMYTPVTDGVSSPVFSHSQVPMRKDGECFSSQSSDSHGVLSRSAS 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 25226650 25231599 + CrPI670011_08g011950.1 Cre08g1195 506113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g1195 792 SMART serkin_6 474 739 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre08g1195 792 CDD STK_N 22 179 - -
Cre08g1195 792 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 446 546 - -
Cre08g1195 792 Gene3D HUPs 21 176 IPR014729 -
Cre08g1195 792 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 25 168 - -
Cre08g1195 792 Coils Coil 333 360 - -
Cre08g1195 792 Coils Coil 400 455 - -
Cre08g1195 792 Pfam Protein kinase domain 477 729 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre08g1195 792 Gene3D Transferase(Phosphotransferase) domain 1 547 743 - -
Cre08g1195 792 SUPERFAMILY Protein kinase-like (PK-like) 458 734 IPR011009 -
Cre08g1195 792 Gene3D Phosphorylase Kinase; domain 1 452 546 - -
Cre08g1195 792 MobiDBLite consensus disorder prediction 773 792 - -
Cre08g1195 792 PANTHER OS02G0152300 PROTEIN 25 765 IPR051348 -
Cre08g1195 792 ProSiteProfiles Protein kinase domain profile. 474 739 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre08g1195 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 593 605 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre08g1195 792 MobiDBLite consensus disorder prediction 209 232 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2803 Cre-Chr5:38749871 Cre08g1195 Cre-Chr8:25226650 2.00E-295 dispersed
Cre08g1195 Cre-Chr8:25226650 Cre11g1565 Cre-Chr11:25312035 1.10E-216 dispersed
Cre08g1195 Cre-Chr8:25226650 Cre08g0940 Cre-Chr8:22594997 2.70E-199 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64349 PF00069 Pkinase 2.50E-38 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g1195 - - - 0.0