Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g1316 ATGGCTGGTTTCTCAAGAGCTCTGTTTCTTCTCACCTTCCTCCTCTTCAGCTTCTCAGAAGCTAGAGAGATATTGGTCGGAGGCAAATCCGACGCCTGGAAAATCCCTTCTTCTCAATCTCAATCTCTCAATCAATGGGCTGAAGCCTCCCGCTTTCGCATCGGCGACACTCTCGTGTGGAATTACGAAGAAGGGAAAGATTCGGTACTGAAAGTGAGGAAGGAAGATTACGAAGCCTGCAATACCGAAAACCCAGAACAGAGATTTGAGGATGGGAATACGAAAGTTGAGCTACAGAGACCAGGGCCATTTTATTTCATCAGTGGGGCAAAGGGCCATTGCGAGCAGGGCCAGAAGCTGGTCGTTGTGGTTGTGACTCCTCGCCGCAGGTTCATCGGCATCTCTCCGGCGCCTTCTCCCGCGGAGAGTGAGGGTCCGGCGGTTGCTCCGTCGAGTGGAGCTGCAAATTTGAAGGTTGGACTTTTGGCGGTGATCGTCGGAATTTTGGGTGTTGGAGTTGGTTTGTTGTGA 531 51.6 MAGFSRALFLLTFLLFSFSEAREILVGGKSDAWKIPSSQSQSLNQWAEASRFRIGDTLVWNYEEGKDSVLKVRKEDYEACNTENPEQRFEDGNTKVELQRPGPFYFISGAKGHCEQGQKLVVVVVTPRRRFIGISPAPSPAESEGPAVAPSSGAANLKVGLLAVIVGILGVGVGLL 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26292352 26292961 + CrPI670011_08g013160.1 Cre08g1316 506234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g1316 176 ProSiteProfiles Phytocyanin domain profile. 22 126 IPR003245 GO:0009055(InterPro)
Cre08g1316 176 FunFam Early nodulin-like protein 1 21 129 - -
Cre08g1316 176 CDD OsENODL1_like 22 120 IPR041846 -
Cre08g1316 176 SUPERFAMILY Cupredoxins 21 125 IPR008972 -
Cre08g1316 176 Gene3D - 20 128 IPR008972 -
Cre08g1316 176 PANTHER BLUE COPPER PROTEIN 16 136 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Cre08g1316 176 Pfam Plastocyanin-like domain 33 118 IPR003245 GO:0009055(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g1316 Cre-Chr8:26292352 Cre10g0769 Cre-Chr10:7526446 3.20E-28 dispersed
Cre08g1316 Cre-Chr8:26292352 Cre03g0491 Cre-Chr3:3389869 5.40E-07 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g1316 - - - 0.0