Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g1372 ATGGCGGCGGACGGATTTCAATTTCTATTGGGGCTCTTAAGTCTGCTGCTTTTGGTACCAGGTGGGTTTTCGACGAGCTTTACTTTTGTGAACAAATGTGGATTCACGGTTTGGCCGGGGGTTCTGTCGAACGGTGGCGTTCCACCGCTTCCCACTACTGGCTTCTCTCTTCAGACTGGAGAGTCCAAGACACTACCGGCGCCGGCGTCTTGGGGCGGGCGTTTCTGGGGGCGAACACTCTGCTCTGAAGATTCCACCGGGAAATTCTCCTGCGCTACTGGCGACTGTGGCTCTAACAAACTAGAGTGTGCTGGAAACGGAGCAACGCCACCGGCGACTCTCGCGGAGTTCACTCTCGACGGCTCCGGCGGGCTTGATTTCTTCGACGTTAGTCTGGTGGACGGTTACAATCTTCCGATGATTGTGGTGCCTCAGGGTGGTTCCGGCGACAACTGCACGAGCACCGGCTGCGTGGTGGATCTGAACGGCGCGTGTCCATCAGAGCTGCGCGTGACGAGTGCCGACGGAAGAGAAGGCGTCGCGTGTAAAAGCGCGTGTGATGCTTTCAATCAACCGCAGTACTGTTGCACAGGCGCGTACCAAACACCGGACACTTGTCAGCCATCGATGTACTCTCAGATCTTCAAGAGAGCGTGCCCACGCGCTTACAGCTACGCGTACGATGATAAAACGAGTACTTTCACATGCGCCAGTGCTGATTACGTCATCACATTCTGTCCATCGCCAAACACCAGCCAAAAGTCATCGGAGGCACAGAATTCACCTGCGACGGCGAACCCATCTTCCGGCGGCGATGGTGCGATGGTGTACGAAGGTGCATCCCTGATTCAAACCGACTCAGCGCCGCCGCGCTTAGCCGGGATTTCAGCGGTCAGTGCGGTGGCGATTTGGTGGTTGTGGCAGCAGCTGTTCTTCTACTTCTGA 945 56.4 MAADGFQFLLGLLSLLLLVPGGFSTSFTFVNKCGFTVWPGVLSNGGVPPLPTTGFSLQTGESKTLPAPASWGGRFWGRTLCSEDSTGKFSCATGDCGSNKLECAGNGATPPATLAEFTLDGSGGLDFFDVSLVDGYNLPMIVVPQGGSGDNCTSTGCVVDLNGACPSELRVTSADGREGVACKSACDAFNQPQYCCTGAYQTPDTCQPSMYSQIFKRACPRAYSYAYDDKTSTFTCASADYVITFCPSPNTSQKSSEAQNSPATANPSSGGDGAMVYEGASLIQTDSAPPRLAGISAVSAVAIWWLWQQLFFYF 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26746201 26747594 - CrPI670011_08g013720.1 Cre08g1372 506290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g1372 314 Gene3D Thaumatin 25 247 IPR037176 -
Cre08g1372 314 MobiDBLite consensus disorder prediction 251 268 - -
Cre08g1372 314 SMART tha2 27 247 IPR001938 -
Cre08g1372 314 CDD TLP-PA 26 246 - -
Cre08g1372 314 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Cre08g1372 314 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Cre08g1372 314 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Cre08g1372 314 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Cre08g1372 314 FunFam THAUMATIN-LIKE PROTEIN 1 25 247 - -
Cre08g1372 314 SUPERFAMILY Osmotin, thaumatin-like protein 26 248 IPR037176 -
Cre08g1372 314 Pfam Thaumatin family 31 247 IPR001938 -
Cre08g1372 314 ProSiteProfiles Thaumatin family profile. 24 247 IPR001938 -
Cre08g1372 314 MobiDBLite consensus disorder prediction 251 270 - -
Cre08g1372 314 PANTHER OS03G0233200 PROTEIN 14 247 IPR001938 GO:0005576(PANTHER)|GO:0006952(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1487 Cre-Chr2:26973519 Cre08g1372 Cre-Chr8:26746201 1.50E-99 dispersed
Cre05g1989 Cre-Chr5:31969226 Cre08g1372 Cre-Chr8:26746201 7.70E-126 dispersed
Cre05g2634 Cre-Chr5:37388781 Cre08g1372 Cre-Chr8:26746201 7.70E-78 dispersed
Cre08g1372 Cre-Chr8:26746201 Cre10g0334 Cre-Chr10:2155181 9.70E-92 dispersed
Cre08g1370 Cre-Chr8:26729300 Cre08g1372 Cre-Chr8:26746201 7.20E-77 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g1372 - - - 0.0