Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g1412 ATGGCGGACGCAGGCTCCGTCTCCCACAAGAGAATGTCTTGTTCTATCCCCGAGAGGTTCCAGCTCCATGCGGCCATGTTGGCCTTGCAATTCGGCTATGCCGGTTTCCATGTCGTCTCTAGAGCTGCTCTCAACATGGGCATCAGTAAACTTGTCTTCCCTGTCTACCGAAACGTCATCGCTTTGCTCCTCCTCCTCCCCTTCGCATATTTCATCGAAAAGAAAGATAGGCCTGCACTCACTGTCAACTTTGTCCTTCAGTTCTTCCTACTCGCTCTTGTTGGAATTACAGCCAATCAAGGGTTTTATTTGCTGGGTTTGGATAATACTTCCCCAACCTTTGCTTCTGCTATTCAAAATTCTGTCCCTGCCATTACTTTCCTCATGGCTGCACTTCTCAGGATTGAGCAAGTGCGACTGAACCGAAAAGATGGGATAGCGAAGGTGATGGGTACAATATGTTGCGTAGCCGGAGCGACGGTGATCACGTTATACAAAGGGCCCACCATCTACAGCCCAGCAACGACAACGGTGATGGTACAAGAGACAGCAGAGACGGCGGGGACGATGCTGATGGGGCCGGGAATGTTCCCGTCGTTAGGCGACGCAAAGGGGAAAAGCTGGACGTTAGGGTGCGTTTACTTGATCGGACACTGCTTGTCGTGGTCGGCGTGGCTAGTCCTACAAGCACCGGTGCTGAAAAAATATCCGGCTCGCCTCTCAGTTACCTCCTTCACTTGCTTCTTTGGCCTCATCCAATTCCTCATCATCGCCCTCGCCTTCGAGCGCGACGCTCAGGCTTGGCTCTTCCACTCCGGCGCTGAAGCCTTTAGCATCGTTTATGCTGGGGTGGTGGCTTCGGGGATAGCGTTTGCTGTACAGATATGGTGCATTGACAGAGGTGGTCCGGTCTTCGTTGCTGTCTACCAACCGGTTCAGACCTTCGTTGTTGCTCTCATGGCTTCCTTCGCTTTGGGCGAGGAGTTCTATTTGGGAGGGATCATAGGAGCGGTGCTGATTATATCAGGACTGTACCTTGTGCTATGGGGAAAGAGCGAAGAAAAGAAGATCTTATTGGAAAGAGCTGTGATCCAGTCCGCCCCGGACCACGGCAGCAGCAGAACAAGTAGCCACGTCAAGCCGTCCATTACCCAGCCACTTCTCCATCCTACGGCTGACAATGTTTGA 1188 52.36 MADAGSVSHKRMSCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNVIALLLLLPFAYFIEKKDRPALTVNFVLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAALLRIEQVRLNRKDGIAKVMGTICCVAGATVITLYKGPTIYSPATTTVMVQETAETAGTMLMGPGMFPSLGDAKGKSWTLGCVYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSFTCFFGLIQFLIIALAFERDAQAWLFHSGAEAFSIVYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVALMASFALGEEFYLGGIIGAVLIISGLYLVLWGKSEEKKILLERAVIQSAPDHGSSRTSSHVKPSITQPLLHPTADNV 395
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 27110485 27114689 + CrPI670011_08g014120.1 Cre08g1412 506330
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre08g1412 395 MobiDBLite consensus disorder prediction 368 395 - -
Cre08g1412 395 Pfam EamA-like transporter family 27 163 IPR000620 GO:0016020(InterPro)
Cre08g1412 395 Pfam EamA-like transporter family 210 348 IPR000620 GO:0016020(InterPro)
Cre08g1412 395 PANTHER WAT1-RELATED PROTEIN 24 367 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cre08g1412 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 352 - -
Cre08g1412 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g1412 Cre-Chr8:27110485 Cre10g1762 Cre-Chr10:32014096 1.20E-62 dispersed
Cre03g1092 Cre-Chr3:10206024 Cre08g1412 Cre-Chr8:27110485 1.50E-56 transposed
Cre06g2320 Cre-Chr6:31148932 Cre08g1412 Cre-Chr8:27110485 1.80E-106 transposed
Cre09g2376 Cre-Chr9:43102513 Cre08g1412 Cre-Chr8:27110485 1.10E-57 transposed
Cre11g2016 Cre-Chr11:31933258 Cre08g1412 Cre-Chr8:27110485 5.70E-61 transposed
Cre05g2033 Cre-Chr5:32340675 Cre08g1412 Cre-Chr8:27110485 4.80E-165 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g1412 - - - 0.0