Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre08g1431 | ATGCCTTTCCTCTGCTTTTGGTGCTTTGCCGCCGCTGCTCTCTCAATCGTCGCCGTCTTTCGATTTTATTTGAAGAATGCGCCGCGCTCGCGGAGTTCGCATTCTTCTCCTCCTGGAAGCAGAGGTTTGCCTCTCATTGGAGAGACGCTCCAGTTCATGGCCGCCGTCAACTGCAGCAACGGCGTTTATGATTTCGTCACAACCCGCTGCCTCCGGTACGGAGGATGCTTTAAGACTCGAATATTTGGAGAGACGCATGTGTTTGTTTCGAGCAACGAATCGGCGAAGCTTATACTCAACGACGGCAAAGGCAGGTTCACTAAGAAGTATATAAAGTCCATTGCTGAGCTAGTCGGCCATCAAAGTTTGCTTTGTGCTTCACATTTGCACCACAAATTCTTACGTAGTCGTCTCATCAATCTTTTCTCCTCCTGTTTTTTGGCCTCTTTCGTTACGCAATTCGATCAACAAATCGTTTCGACGTTTCGATGTTGGGATACCGGTTCCACCATTGTCCTCCTCAACGAAGCCCTCAAGATAACATGCAAAGCAATGTGCAAGATGCTGATAAGCTTAGAAAAGGAAAACGAAGTAGAGGCATTCCAGAAAGAGGTTGGTTATGTATGTGAAGCTATGCTTGCATTCCCATGGAGATTTCCAGGGACAAGATTCCACAAAGGCCTCAAGGCAAGAAGAAGAATCATAAAAATACTGGAAAGTATGATTCAAGAGAGACGAGAATCAGAGCCTCAGCATGGAGATTTCTTACAACGGCTGTTGACAGAGGAGGACGGTGGAGAAGCCCTATCAGATGCAGAGATTGGAGATAATATATTGACGATGTTGATTGCTGGACAGGATACCACGGCGAGTGCCATCACTTGGATGATGAAGTTCTTACATGAGAATCAAGATGTACTTCAAAATCTTAAGGAAGAACAATTCAGAATATTGGGCAAAAAACAAGATCATGGGAGTTGTTTCCTTACTTTGGAAGATCTAGGCAACATGCCTTATGCTGCCAAGGTAGTAAAAGAATCATTGAGGTTAGCATCTATCGTGCCATGGTTCCCAAGACTAATCCTTCACGACATTGAAATGGAAGGTTACAAAATCAAGAAAGGTTGGAATGTTAACATTGATGTGAGATCACTACATTCGGATCCTTCTCTCTATAAAGATCCTATCAAGTTCAATCCATCCAGGTTTGATGAAGAAGCAAAGCCCTTTAGCTTTCTAGCTTTTGGGATGGGAGGGAGGCAATGTCTAGGGATGAATCTAGCCAAAGCCATGATGCTTGTCTTTCTTCACCGCTTGGTGACTTCTTTCAGATGGAAGGTAATCGACTCCGACTCTAGCATTGAGAAGTGGGCCCTTTTTACCAAATTAAAGAGTGGTTGTCCAATTCTCATCACACGTATTAAATCTTAA | 1431 | 44.1 | MPFLCFWCFAAAALSIVAVFRFYLKNAPRSRSSHSSPPGSRGLPLIGETLQFMAAVNCSNGVYDFVTTRCLRYGGCFKTRIFGETHVFVSSNESAKLILNDGKGRFTKKYIKSIAELVGHQSLLCASHLHHKFLRSRLINLFSSCFLASFVTQFDQQIVSTFRCWDTGSTIVLLNEALKITCKAMCKMLISLEKENEVEAFQKEVGYVCEAMLAFPWRFPGTRFHKGLKARRRIIKILESMIQERRESEPQHGDFLQRLLTEEDGGEALSDAEIGDNILTMLIAGQDTTASAITWMMKFLHENQDVLQNLKEEQFRILGKKQDHGSCFLTLEDLGNMPYAAKVVKESLRLASIVPWFPRLILHDIEMEGYKIKKGWNVNIDVRSLHSDPSLYKDPIKFNPSRFDEEAKPFSFLAFGMGGRQCLGMNLAKAMMLVFLHRLVTSFRWKVIDSDSSIEKWALFTKLKSGCPILITRIKS | 476 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 27282440 | 27287655 | + | CrPI670011_08g014310.1 | Cre08g1431 | 506349 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre08g1431 | 476 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 415 | 424 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre08g1431 | 476 | Gene3D | Cytochrome P450 | 25 | 474 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre08g1431 | 476 | SUPERFAMILY | Cytochrome P450 | 30 | 473 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre08g1431 | 476 | CDD | CYP90-like | 69 | 473 | - | - | |
| Cre08g1431 | 476 | PRINTS | P450 superfamily signature | 413 | 422 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre08g1431 | 476 | PRINTS | P450 superfamily signature | 284 | 301 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre08g1431 | 476 | PRINTS | P450 superfamily signature | 342 | 353 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre08g1431 | 476 | PRINTS | P450 superfamily signature | 422 | 433 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre08g1431 | 476 | PRINTS | E-class P450 group I signature | 273 | 290 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre08g1431 | 476 | PRINTS | E-class P450 group I signature | 293 | 319 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre08g1431 | 476 | PRINTS | E-class P450 group I signature | 341 | 359 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre08g1431 | 476 | PRINTS | E-class P450 group I signature | 412 | 422 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre08g1431 | 476 | PRINTS | E-class P450 group I signature | 381 | 405 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre08g1431 | 476 | PRINTS | E-class P450 group I signature | 422 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre08g1431 | 476 | PANTHER | CYTOCHROME P450 26 | 37 | 443 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) | |
| Cre08g1431 | 476 | Pfam | Cytochrome P450 | 37 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre08g1431 | Cre-Chr8:27282440 | Cre09g0926 | Cre-Chr9:9360740 | 1.50E-75 | dispersed | |
| Cre04g1592 | Cre-Chr4:34440090 | Cre08g1431 | Cre-Chr8:27282440 | 1.60E-96 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre08g1431 | - | - | - | 0.0 |