Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g1472 ATGACCTCCGACGGCGCCACTTCTGCCTCCACTTGCCGGCGGAAGCCGTCTTGGAGGGAGCGGGAGAATAATCGGACCAGAGAGCGTCGGAGGAGAGCCATCGCCGCTAAGATTTACTCTGGCCTTAGGGCTCAGGGCAACTTCAATTTGCCTAAACACTGTGACAACAACGAGGTCCTTAAAGCCCTCTGTGCTGAAGCTGGTTGGACCGTCGAAGATGACGGAACCACTTATCGGAAGGGATGCAAGCCGCCCCCAATTGATATTGTTGGCACTTCAACCAAAATCACCCCTTACTCTTCCCAAAATCCAAGCCCATTGTCTTCTTCATTCCCCAGTCCTATGGGATCCTACCAAGTCAGTCCCTCCTCCTCCTCCTTCCCGAGCCCGTCCCGTCTCGACGCCAACAATCCGTCGAACCTCATTCCTTATCTTCGCCAAGCGATTCCCATATCGCTTCCTCCTCTTAGAATCTCAAACAGTGCTCCTGTGACCCCTCCCCTTTCATCCCCAGCCTCGAGGACTCCGCAGCCATTCCCCAATTGGGAAGTCACTGCTAAAGAATCCTTATCCTCCTTGAATTACCCTTTCTTTGCAGTATCTGCTCCAGCTAGCCCGACTCGACCTCAGCTCCATACTCCCGCCACGATCCACAAATTCGACGAATCTGAATCATCCACCAATGAGTCCAGTCAATGGGCACTTCTCCGTGCATATGCACCTTCTGCATCGACAATGCCAACATCTCCCACGTTCAACCTTGTGAAACCTGCTGACCAACATGCTCTACACGATGGTTTCATCAAAGAAAATGGAAGAGGAAACGAATTTGAGTTCTTGGGCTACAAGGTTAAGCCTTGGGAAGGGGAGAAGATTCATGATGTCGGATTGGAGGATTTAGAGCTCACACTCGGTAGCGATGTAACATATGATGAGAAGGGGTTGGACATTGAAATGAACACATATTGCTCTGTTTTTCCTCATCCAAACTCTGTTTCAATTCAACCATTTGCTTGCATTTTGCCATTGGATGGAACTGAAGATGGATTGGGATTGGAATTGGAATTGTGGCGGGGTTGGGGGCCATGA 1089 50.41 MTSDGATSASTCRRKPSWRERENNRTRERRRRAIAAKIYSGLRAQGNFNLPKHCDNNEVLKALCAEAGWTVEDDGTTYRKGCKPPPIDIVGTSTKITPYSSQNPSPLSSSFPSPMGSYQVSPSSSSFPSPSRLDANNPSNLIPYLRQAIPISLPPLRISNSAPVTPPLSSPASRTPQPFPNWEVTAKESLSSLNYPFFAVSAPASPTRPQLHTPATIHKFDESESSTNESSQWALLRAYAPSASTMPTSPTFNLVKPADQHALHDGFIKENGRGNEFEFLGYKVKPWEGEKIHDVGLEDLELTLGSDVTYDEKGLDIEMNTYCSVFPHPNSVSIQPFACILPLDGTEDGLGLELELWRGWGP 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27577388 27579131 - CrPI670011_08g014720.1 Cre08g1472 506390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g1472 362 MobiDBLite consensus disorder prediction 14 30 - -
Cre08g1472 362 MobiDBLite consensus disorder prediction 93 132 - -
Cre08g1472 362 MobiDBLite consensus disorder prediction 1 30 - -
Cre08g1472 362 Pfam BES1/BZR1 plant transcription factor, N-terminal 13 136 IPR008540 -
Cre08g1472 362 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 12 307 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1384 Cre-Chr7:28736847 Cre08g1472 Cre-Chr8:27577388 7.80E-44 dispersed
Cre04g1543 Cre-Chr4:34062921 Cre08g1472 Cre-Chr8:27577388 5.20E-85 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54232 PF05687 BES1_N 4.00E-62 No_clan Cre TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g1472 K14503 - csv:101219853 526.554