Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g1501 ATGCCTTTCTTTCACAAAAGCGCTTCAAATTCTCGGCTTCAACAGAAGGTACCCAATTCTGAATTTTCCGTTGGACTACCGGAACCGCTCGTTCAACGGCGGCTCACCAGACAGAGGAAGCTCCGGCATCTTACGGATAGGGACGTTGGCTTTGAACACCCCCGATCATCTCCCGATTGCCCCGATTTTTCGGCAAAACCTAGATCGCCTCTAGGGGGTTCCGAACGTTGGTCCTCGTCGGCTTTGCCCCTGCCTTTGCCTCTTCCGGAGTTCTTTCCGGTTCAGAGCCCGGAGTCCGGTTCTTGGAATTCTGGCCAAGGGCGTGTTGGATCGCCTATTGAAACTCCGGTCCGAAATTCCGCTATTAAAACTGTTAGGAAGAACTCTGATCGTGCAACAACGAATGTAAGTAAAAGTTTGGGCCACAATCAAAGGCGAGTTGCTATAGATTTGACCTTGGAAGTTAATAATGGCAATTCAGGAGGGGCCGGGGCTACCACATTTACAACCCCTCAAAGCCTCTCTGTGAATCCGGAGAAATCGAATCCGAATAAGGAGTTTCTTTTTGGTTGTTCAGATCAGCTTCCAAACAACAAAGGCAGGGGTTCCCCTACTTATCCGAGTATTGAAAGGGGTAACTACGATTTGACACCTAAGAATTCGTCGTCAAAGAGTGCGCCAACCAGCATTTTACCGAGTCCTGCTGTTAGCCCACGAAGAACACACACTGGAAATTTTTTTGTTTCTGGTTTGACTCACCATGAATATCAGGAATCTCCTTCTAATAATTCTCCTAAAGTACCACCCCTTAAAACTGCACATAGTTCTCAACCTTCCCCTCTCCATAGCCCGACAGCTCGAGGTTCCATAAGCAATCCCAGATCTCCTAATGATGTGACATTTCTCCCACATCCCAAGTTACAAAAAGATAGTAGTATAGATCGGTCTGAAAGCCATGGTCATGTCAATGCCCATCCATTGCCCCTTCCTCCTCCATTAGTAGCCTCTTCACAAGCATCTCCACAATCTCTTCCGTCAAATGTTCATCATGTTTTTGAGAAGCCATACATTTTATCTATGAAAGGTCAGTGGCAAAAAGGAAAGCGAATTGGGCGTGGTACGTTCGGAAGCGTTTATCTAGCAACCAACAGAGAGACTGGAGCTTTATGTGCAATGAAAGAAGTTGACCTAATTCCTGATGATCCTAAATCTGCTGAATGTATAAAGCAACTAGAGCAGGAAATTAAAGTCCTCAGTCAGCTTAAACATCCAAATATTGTACAGTATTATGGAAGTGAAATAATTGGTGATCATTTCTATATATATTTGGAGTATGTTCATCCTGGTTCAATAAATAAATATGTTCGTGAACATTGTGGAGCCATTACAGAATCTATTGTTCGCAATTTCACCCGCCATATTCTCTCTGGACTGGCTTACTTGCATAGCACAAAAACAATTCACAGAGATATCAAAGGTGCAAACTTGCTAGTTGATTCATCAGGCGTTGTCAAACTTGCAGATTTTGGGATGGCAAAACATCTGACAGGGCAGTATGATCTTTCTTTGAAGGGTAGTCCGAACTGGATGGCTCCGGAGGTCATAAAGGCTGCTATGTTGAAAGATGCCAACCCTGATCTTGCTTTGGCAGTTGACATTTGGAGTCTGGGTTGCACCATAATTGAAATGCTGAATGGAAAACCTCCATGGTCTGAGTTTGAAGGGCATCAAGCTATGTTCAAGGTGTTGAATAAAACCCCGCCTACCCCAGAAAAGCTATCTCCTGAAGGGAAAGACTTCCTCCAGTGTTGCTTTCAGAGGAATCCAGCTGACAGACCAACAGCCTCGGTGCTCCTTGACCATCCTTTCTTAAGATCCTCAACTGACTCAAATGTTTCAATCCCCACGTCATCATTTTCAACAATGAACCTCTTGGAAAAATTGTTGAGTCCAAAGGACCCGCTTGATCCCAAAGGAGATCAGGCACAAAACTCTCCTGGAACTTCGGCTTCAAATGATTATTTGCTGTGCCGTAGTCCTTCAACGAACATTGCAAGCAATGTTCCTGCCAACGCTGTTACCAATCATCACTTTTCTATTTCAAGGACTCATAAAAGGGAAGTGCTGCACCTCTGA 2136 44.66 MPFFHKSASNSRLQQKVPNSEFSVGLPEPLVQRRLTRQRKLRHLTDRDVGFEHPRSSPDCPDFSAKPRSPLGGSERWSSSALPLPLPLPEFFPVQSPESGSWNSGQGRVGSPIETPVRNSAIKTVRKNSDRATTNVSKSLGHNQRRVAIDLTLEVNNGNSGGAGATTFTTPQSLSVNPEKSNPNKEFLFGCSDQLPNNKGRGSPTYPSIERGNYDLTPKNSSSKSAPTSILPSPAVSPRRTHTGNFFVSGLTHHEYQESPSNNSPKVPPLKTAHSSQPSPLHSPTARGSISNPRSPNDVTFLPHPKLQKDSSIDRSESHGHVNAHPLPLPPPLVASSQASPQSLPSNVHHVFEKPYILSMKGQWQKGKRIGRGTFGSVYLATNRETGALCAMKEVDLIPDDPKSAECIKQLEQEIKVLSQLKHPNIVQYYGSEIIGDHFYIYLEYVHPGSINKYVREHCGAITESIVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSSGVVKLADFGMAKHLTGQYDLSLKGSPNWMAPEVIKAAMLKDANPDLALAVDIWSLGCTIIEMLNGKPPWSEFEGHQAMFKVLNKTPPTPEKLSPEGKDFLQCCFQRNPADRPTASVLLDHPFLRSSTDSNVSIPTSSFSTMNLLEKLLSPKDPLDPKGDQAQNSPGTSASNDYLLCRSPSTNIASNVPANAVTNHHFSISRTHKREVLHL 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27766371 27770759 + CrPI670011_08g015010.1 Cre08g1501 506419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g1501 711 MobiDBLite consensus disorder prediction 96 135 - -
Cre08g1501 711 Gene3D Transferase(Phosphotransferase) domain 1 361 652 - -
Cre08g1501 711 MobiDBLite consensus disorder prediction 1 79 - -
Cre08g1501 711 MobiDBLite consensus disorder prediction 41 55 - -
Cre08g1501 711 MobiDBLite consensus disorder prediction 117 135 - -
Cre08g1501 711 SUPERFAMILY Protein kinase-like (PK-like) 341 656 IPR011009 -
Cre08g1501 711 MobiDBLite consensus disorder prediction 158 345 - -
Cre08g1501 711 ProSitePatterns Protein kinases ATP-binding region signature. 370 393 IPR017441 GO:0005524(InterPro)
Cre08g1501 711 MobiDBLite consensus disorder prediction 158 182 - -
Cre08g1501 711 SMART serkin_6 364 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre08g1501 711 Pfam Protein kinase domain 365 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre08g1501 711 MobiDBLite consensus disorder prediction 661 675 - -
Cre08g1501 711 MobiDBLite consensus disorder prediction 650 675 - -
Cre08g1501 711 MobiDBLite consensus disorder prediction 7 21 - -
Cre08g1501 711 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 33 629 IPR050538 -
Cre08g1501 711 MobiDBLite consensus disorder prediction 214 298 - -
Cre08g1501 711 FunFam Mitogen-activated protein kinase kinase kinase 5 361 661 - -
Cre08g1501 711 ProSiteProfiles Protein kinase domain profile. 364 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre08g1501 711 MobiDBLite consensus disorder prediction 96 110 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g1007 Cre-Chr5:9296725 Cre08g1501 Cre-Chr8:27766371 5.80E-89 dispersed
Cre08g1501 Cre-Chr8:27766371 Cre09g2066 Cre-Chr9:39714244 1.30E-91 dispersed
Cre04g1290 Cre-Chr4:31682778 Cre08g1501 Cre-Chr8:27766371 2.00E-139 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64355 PF00069 Pkinase 9.90E-70 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g1501 - - - 0.0