Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g1580 ATGAAAATGAAGATGCAAACTTGCAGACTTTCACAATGGTTTCTTCTGTTTTTGATTTCATTCTGTTCATGTTCATTTACAGAAGCACAAAAGAGCAATCAGCAGTTGAAGAAGAAGACTTACATAATTCACATGGACAAAAGCAATATGCCACAAGCCTTTGATGATCATTTCCAGTGGTATGATTCTTCTTTGAAATCAGTTTCTGATTCAGCCCAAATGCTTTATTCCTACAACACAGTTGTTCATGGCTTCTCCACAAGATTGACTGTTGAGGAGGCTAAGTTAATAGAAAAGCAAGAAGGAATTCTTGCTGTCATACCTGAAGTGAAGTATGAGCTTCATACCACTCGAACGCCTGAGTTTCTTGGACTTGGGAAGAGTGTTTCTTTCTTCCCGGCGTCGGAGAAGGTCGGGGAAGTGATCATTGGAGTTCTCGACACCGGTGTATGGCCTGAATTGGAGAGCTTCAATGATAGAGGGCTTGGACCAGTACCTGCAAGCTGGAAAGGTGAGTGTGAAGTGGGTAAAAACTTCACCTCATCTAGTTGTAACAGGAAATTGATAGGAGCCAGGTACTTTTCCAAGGGCTATGAAGCAGCCTTTGGTGCAATTGATGAATCCCAGGAGTCGAAATCGCCAAGGGACGACGATGGCCATGGTTCTCACACGTCAACAACCGCTGCAGGATCCGCCGTGACGGGTGCCAGCCTCTTTGGCTTTGCTGCAGGGACTGCAAGAGGAATGGCGGCTGAAGCTCGGGTTGCGACATATAAGGCTGTTGAAGATGGCGTCAATGTTCTATCCATGTCGCTTGGTGGATCCTCCCCTGATTACTACAGAGACAATGTTGCCATTGGAGCCTTCTCTGCTGCAGCTCAGGGAATTTTTGTCTCATGTTCTGCTGGAAATGGTGGCCCATCCACAGGTAGCTTGTCCAATGTGGCGCCATGGATAACCACGGTCGGCGCCGGGACGCTGGACAGAGACTTCCCAGCATATGTTACTCTTGGAGATGGGAAGAAGATCACAGGGGAGTCGCTCTACAGTGGAAAGCCTTTGCCGGACTCTTTACTACCAATTGTATATGCAGGCAATGCGAGTAACTCAACCAGTGGTAGCCTTTGTTTGAGCAGTACTCTGAATCCGGCGAAGGTGGCCGGAAAAATAGTCGTGTGTGACAGAGGAGGGAACTCTCGAGTTCAGAAAGGGTTGGTGGTAAAAGAGGCCGGTGGTGTAGGGATGATTCTAGCCAACACTGAAACATATGGGGAAGAACAATTAGCCGATGCACATCTCTTGCCGACGGCGGCCGTTGGCCAAAAATCTGGCGACGCAATAAAGAGCTACATCATCTCCGACGCTAACCCAACAGCAACAATCAGCAGCGGCACCACAAGATTAGGCGTTCAACCGTCGCCGCTGGTGGCAGCATTCAGTTCTCGTGGCCCTAATCTCCTCACTCCACATATTCTCAAACCCGATTTGATAGCACCGGGAGTGAACATTCTGGCTGGATGGACCGGCGGCGCTGGACCAACTGGTTTAGACAGCGATAAGCGGCACGTGGCCTTCAACATCATCTCCGGCACATCAATGTCGTGCCCTCACATCAGTGGATTAGCCGCTCTTCTTAAAGCCGCTCATCCAGATTGGAGCCCAGCTGCCATTAGATCTGCCCTAATGACCACAGCATACTCAACATACAAAAATGGCGAAGCGATTCAAGACGTATCCAACGGATCACCGTCGACGCCGTTCGATGTCGGAGCCGGACATGTAAATCCAACGGCTGCCCTTGATCCCGGCCTTGTTTACGATACCACCACCGACGATTACTTCGCCTTCCTCTGTGCCCTAAACTACAGCTCACTTCAAATTAAAGTAATCAGCAAGAAAGACTTCACCTGCAATAGAAACAAGAACTACAAATTGGAGGATCTGAACTACCCGTCATTTGCAGTTCCACTAGAAACCCCTGCCACCAAAGGAGGTGAAGACGTCGCTCCGACCACCGTAAAATATACAAGGACTCTGACCAACAAGGGTGCTCCATCGACGTATAAGGTCTCAGTGACGGCGAAAAGTCCATCGGTGAAGATTGTGGTTGAACCGGAATCATTGAGTTTTGCAGAGGCAAATGAGCAAAAGAGTTATACAGTGACATTCATTGCTTCTCCAATGCCGTCGGGATCTGAGAGCTTTGCTCGTCTGGAATGGTCAGATGGGAAACACATTGTGGGCAGCCCCATAGCTTTCACCTGGACTTAA 2271 48.79 MKMKMQTCRLSQWFLLFLISFCSCSFTEAQKSNQQLKKKTYIIHMDKSNMPQAFDDHFQWYDSSLKSVSDSAQMLYSYNTVVHGFSTRLTVEEAKLIEKQEGILAVIPEVKYELHTTRTPEFLGLGKSVSFFPASEKVGEVIIGVLDTGVWPELESFNDRGLGPVPASWKGECEVGKNFTSSSCNRKLIGARYFSKGYEAAFGAIDESQESKSPRDDDGHGSHTSTTAAGSAVTGASLFGFAAGTARGMAAEARVATYKAVEDGVNVLSMSLGGSSPDYYRDNVAIGAFSAAAQGIFVSCSAGNGGPSTGSLSNVAPWITTVGAGTLDRDFPAYVTLGDGKKITGESLYSGKPLPDSLLPIVYAGNASNSTSGSLCLSSTLNPAKVAGKIVVCDRGGNSRVQKGLVVKEAGGVGMILANTETYGEEQLADAHLLPTAAVGQKSGDAIKSYIISDANPTATISSGTTRLGVQPSPLVAAFSSRGPNLLTPHILKPDLIAPGVNILAGWTGGAGPTGLDSDKRHVAFNIISGTSMSCPHISGLAALLKAAHPDWSPAAIRSALMTTAYSTYKNGEAIQDVSNGSPSTPFDVGAGHVNPTAALDPGLVYDTTTDDYFAFLCALNYSSLQIKVISKKDFTCNRNKNYKLEDLNYPSFAVPLETPATKGGEDVAPTTVKYTRTLTNKGAPSTYKVSVTAKSPSVKIVVEPESLSFAEANEQKSYTVTFIASPMPSGSESFARLEWSDGKHIVGSPIAFTWT 756
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 28349022 28351346 - CrPI670011_08g015800.1 Cre08g1580 506498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g1580 756 Pfam Peptidase inhibitor I9 40 115 IPR010259 -
Cre08g1580 756 Pfam Fibronectin type-III domain 647 752 IPR041469 -
Cre08g1580 756 SUPERFAMILY PA domain 381 448 IPR046450 -
Cre08g1580 756 CDD Peptidases_S8_3 112 566 IPR034197 -
Cre08g1580 756 ProSiteProfiles Serine proteases, subtilase domain profile. 111 600 - -
Cre08g1580 756 SUPERFAMILY Subtilisin-like 114 604 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre08g1580 756 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Cre08g1580 756 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Cre08g1580 756 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Cre08g1580 756 Gene3D - 617 755 - -
Cre08g1580 756 FunFam Subtilisin-like protease SBT1.9 29 115 - -
Cre08g1580 756 Gene3D Peptidase S8/S53 domain 141 613 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cre08g1580 756 ProSitePatterns Serine proteases, subtilase family, serine active site. 530 540 IPR023828 -
Cre08g1580 756 MobiDBLite consensus disorder prediction 206 228 - -
Cre08g1580 756 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 751 IPR045051 -
Cre08g1580 756 FunFam Subtilisin-like protease SBT1.5 140 338 - -
Cre08g1580 756 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Cre08g1580 756 Pfam Subtilase family 140 576 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cre08g1580 756 Pfam PA domain 360 447 IPR003137 -
Cre08g1580 756 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 115 IPR037045 -
Cre08g1580 756 Gene3D - 328 468 - -
Cre08g1580 756 CDD PA_subtilisin_like 334 461 - -
Cre08g1580 756 FunFam subtilisin-like protease SBT1.5 328 468 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g0942 Cre-Chr5:8604731 Cre08g1580 Cre-Chr8:28349022 8.70E-219 dispersed
Cre08g1580 Cre-Chr8:28349022 Cre09g0097 Cre-Chr9:1216869 1.50E-202 dispersed
Cre08g1580 Cre-Chr8:28349022 Cre08g1589 Cre-Chr8:28443645 2.10E-132 proximal
Cre04g1357 Cre-Chr4:32375499 Cre08g1580 Cre-Chr8:28349022 2.10E-289 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g1580 - - - 0.0