Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g1618 ATGGCTCCTTGGTGGGGAAGAGAAAGCCATAAAGGAACCCCTGTTGTTGTAAAGATGGAAAATCCCAACTGGTCAATAGTCGAAGTTGAAAGTCCTTCCGATGATGACTTCATCATCGGCGCCGAGTCGCCACCGGGTCGAGCCCGAGACAAGGGACGAGGCAAAAATGCCAAACAGCTCACTTGGGTTCTTCTTCTTAAAGCCCACAAAGCCGCCGGTTGTTTAACCTCCATTGGCGCTGCATTGATCAACATCGTCGCCGCCGTTAAACGCCGTCTTGCTTCTGGAAGAACCGACGCCGACGCCGACGCTGACAACGCCGACGGCGGCGTAAGGGAGAACCCAACTGTCAAAACCAGGTTTTATTTGTTTATTAAGGTTTTCCTTTGGCTGTCGGTGCTTCTGTTAGGGTTTGAGGTGGCGGCATATTACAAAGGTTGGCATTTTAAGGCACCCCATCTTCAATTGGACTACTTATGGACAACCCCATTTGGGGTTAAGGATGTTTTTGACTGGTTTTATTCGAAATGGGTTTTGATTCGGGTTGCATATTTTGCTCCTCCTCTACAGTTTTTAGCCAATGTTTGTATAGTGTTGTTCCTTATTCAGACTTTGGATAGGCTTATTCTTTGTTTGGGTTGTTTCTGGATCCGATTCAAGAAAATCAAACCTGTTCCTAAGGTTGCTGCTTTTGATCTTGAGTCTGGAGAGAGTGGCTACTTCCCTATGGTTCTTGTTCAAATTCCAATGTGCAATGAGAAAGAGGTTTATCAGCAATCAATTGCTGCTGTCTGCAACTTGGACTGGCCAAAAGACAAGTTACTGATTCAGGTTCTTGATGACTCGGATGATCCAATCACCCAATTGCTGATCAGAGAGGAGGTATATAAATGGCAGCAACTCGATGCCAACATTGAATACCGACATCGAGTTATCCGAGAGGGCTATAAGGCAGGCAATCTCAAGTCTGCCATGAGTTGCAGCTATGTAAAAGACTATGAATTTGTTGCAATCTTTGATGCTGATTTTCAGCCTGCCTCGGATTTCCTCAAAAGAACAGTTCCTCATTTTAAGGATAATGAGGAACTAGGACTTGTTCAAGCGCGATGGTCGTTCGTCAACAAAGACGAGAACTTATTAACCAGACTGCAGAACATTAACTTAGCCTTCCATTTTGAAGTAGAGCAACAAGTGAATGGCGTGTTTCTCAATTTCTTTGGATTCAATGGTACTGCTGGAGTTTGGAGGATAAAGGCTCTTGAAGAAGCCGGTGGCTGGTTGGAGAGGACCACTGTTGAGGATATGGACATTGCCGTTCGTGCTCATCTTCATGGCTGGAAATTCATATTCCTCAATGATGTTGAGTGCCAATGTGAATTACCAGAATCGTATGAAGCATATAGAAAACAACAGCACAGATGGCATTCAGGACCGATGCAACTGTTTCGACTTTGTTTGCCTGACATAGTTCGATCAAAGATTGGCATATCAAAGAAATTCAATTTGATCTTCTTGTTCTTTCTCTTACGAAAGCTGATATTGCCATTTTATTCATTTACTCTCTTCTGCATAATTCTCCCAATGACGATGTTCGTTCCTGAAGCCGAGTTACCGGCGTGGGTTGTATGTTACATTCCAGCTACCATGTCCTTTCTCAACATCCTTCCAGCACCAAAATTCTTCCCCTTCATTGTCCCTTACCTCCTCTTTGAGAACACAATGTCAGTAACTAAGTTTAACGCAATGGTCTCAGGACTATTCCAGCTAGGTAGTGCATATGAGTGGGTCGTTACGAAGAAATCAGGCCGCTCGTCCGAGGGTGATCTTGCCTCAATGGTTGAGAAGAAAAAGCTGAACACTGAAAAGAGTGTCTCAGTAAACGACCTTGAGGAGAGTGAGTTGATCCAAAGACAGGACAAGAAGTTGCCAAGGAAGAAGCATAACAGAATATACATGAAGGAACTAGCACTGGCTTTCCTTCTTCTAACAGCATCTGCTAGAAGCCTCCTCTCAGCTCAAGGGATTCATTTCTACTTCTTGCTGTTCCAGGGTATATCCTTCCTCCTTGTCGGTCTAGACTTGATTGGCGAGCAGGTTGTTTGA 2103 44.41 MAPWWGRESHKGTPVVVKMENPNWSIVEVESPSDDDFIIGAESPPGRARDKGRGKNAKQLTWVLLLKAHKAAGCLTSIGAALINIVAAVKRRLASGRTDADADADNADGGVRENPTVKTRFYLFIKVFLWLSVLLLGFEVAAYYKGWHFKAPHLQLDYLWTTPFGVKDVFDWFYSKWVLIRVAYFAPPLQFLANVCIVLFLIQTLDRLILCLGCFWIRFKKIKPVPKVAAFDLESGESGYFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKDKLLIQVLDDSDDPITQLLIREEVYKWQQLDANIEYRHRVIREGYKAGNLKSAMSCSYVKDYEFVAIFDADFQPASDFLKRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEEAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIVRSKIGISKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKFFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSAYEWVVTKKSGRSSEGDLASMVEKKKLNTEKSVSVNDLEESELIQRQDKKLPRKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVV 700
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 28662765 28665310 - CrPI670011_08g016180.1 Cre08g1618 506536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g1618 700 FunFam probable xyloglucan glycosyltransferase 5 235 460 - -
Cre08g1618 700 Pfam Glycosyl transferase family group 2 336 544 IPR001173 -
Cre08g1618 700 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 235 459 IPR029044 -
Cre08g1618 700 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 171 699 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Cre08g1618 700 SUPERFAMILY Nucleotide-diphospho-sugar transferases 244 522 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g2817 Cre-Chr5:38873741 Cre08g1618 Cre-Chr8:28662765 0.00E+00 dispersed
Cre08g0758 Cre-Chr8:20623609 Cre08g1618 Cre-Chr8:28662765 8.20E-111 dispersed
Cre08g1618 Cre-Chr8:28662765 Cre09g0807 Cre-Chr9:8046850 1.10E-244 dispersed
Cre08g1618 Cre-Chr8:28662765 Cre10g2054 Cre-Chr10:35247490 7.10E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g1618 - - - 0.0