Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g1643 ATGTTCTTCATTGAGGATTTGTGGCAGATGCTCTTCGTTCGAGGTTTCCAGGATACAACTCGACTTCTCTCTGAGTCTTTTATACGGACCATATCCGAATCCATGGCCAATTCATCTTGTGGGGTCTCGGAATTAGAACTCTGTAGGGACGATACGGCTGCGCTCCATTTCAAATTAGTCGCCATCGCCTCGATTCTAACATCGGGAGTCATCGGAATCGCCATTCCGTTGTTTGGTAGACAGAGTCGGTTCCTCAAAACAGACGGCAACCTGTTTGTGGCGGCGAAGGCGTTTGCCGCCGGTGTGATTCTAGCCACCGCCTTCGTCCATATGCTTCCGGATGGATCGAAGGCCCTCTCCGATCCGTGCTTGCCGGAATTTCCTTGGTCTAAATTCCCCTTCTCTGGATTCTTCGCGATGATGGCGTCGCTGTTGACGCTCCTCGTCGATTTCGTCGGAACTCAGTACTACGAGCGGAAACAGGGGATGATTCGGTCGAAAGAGGAGGCGAATCGGGTCGGGTCGATTATGGATTCCGGGTTGGAATCCGGCATTGTTCCGGCCGGAGATTTGAACGTGAAAGTGTTTGGGGAAGAGGACGGCGGCGCGATGCACATTGTCGGAATGCATGCCCACGCCGCCCACCACCGGCACAGTCATCCACAGGGGAAGCAGGCATGTGATGGGCACGTGACGGGTCATGATCATGGGCATGGGCACGGGCATGCCCATGGACATGTTCATTCTCATGGGCTGGACGGCGACGATGACGAAAGCGGTGTACGACATGTCGTTGTTTCCCAGATTTTGGAGCTTGGAATAGTGTCACATTCAGTCATAATTGGGCTATCTCTTGGAGTGTCCCACAGCCCATGCACCATTAGACCCTTAATTGCAGCTCTCTCCTTCCATCAGTTCTTTGAAGGCTTTGCCCTTGGTGGCTGCATTTCTCAGGCTCAATTCAACACCCTCTCCACCTCCCTCATGGCTGTCTTCTTCGCCATCACCACGCCCCTCGGCATCTCCATAGGCGCTGCTGTTGCGTCCACCTACAACCCCAACAGCACCGGGGCATTGGTTGCTGAAGGCATTTTGGACTCTCTATCGGCCGGAATTTTGGTGTACATGGCTCTGGTTGATTTGATTGCGGCCGACTTTCTTAGCAAAAGAATGAGCTGCAATTTTAGACTCCAAATTGTTTCGTATTGTACTCTCTTCCTCGGCGCGGGGTTGATGTCTTCGCTTGCGCTTTGGGCTTGA 1260 52.94 MFFIEDLWQMLFVRGFQDTTRLLSESFIRTISESMANSSCGVSELELCRDDTAALHFKLVAIASILTSGVIGIAIPLFGRQSRFLKTDGNLFVAAKAFAAGVILATAFVHMLPDGSKALSDPCLPEFPWSKFPFSGFFAMMASLLTLLVDFVGTQYYERKQGMIRSKEEANRVGSIMDSGLESGIVPAGDLNVKVFGEEDGGAMHIVGMHAHAAHHRHSHPQGKQACDGHVTGHDHGHGHGHAHGHVHSHGLDGDDDESGVRHVVVSQILELGIVSHSVIIGLSLGVSHSPCTIRPLIAALSFHQFFEGFALGGCISQAQFNTLSTSLMAVFFAITTPLGISIGAAVASTYNPNSTGALVAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIVSYCTLFLGAGLMSSLALWA 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 28950993 28953868 - CrPI670011_08g016430.1 Cre08g1643 506561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g1643 419 Pfam ZIP Zinc transporter 56 416 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Cre08g1643 419 PANTHER ZINC/IRON TRANSPORTER 54 418 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Cre08g1643 419 NCBIfam ZIP zinc/iron transport family 40 419 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Cre08g1643 419 MobiDBLite consensus disorder prediction 235 254 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g1643 Cre-Chr8:28950993 Cre11g2094 Cre-Chr11:32727640 1.10E-71 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g1643 K14709 - csv:101218224 746.117