Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g1700 ATGTCAAAACCCTGGGGCGGAATCGGAGCCTGGGCTGCAGATGCCGAGCGTGCCGAGGCTGAGGAACGGGAGGCGCAAGCTGCTGCCGCCGCCTCCCAAGCAGAATCGAAGAATTTCCCTAGCCTTAGGGAAGCTGTTAGCACCAAGCCCAAGAAGAAGAAGATGTCGCTGTCGGAATTCACTATGGGGACCTTGACGGGTCCTGGCGCCGGCGGTAGGCAAACGGAGAGCCAGGGCTTGACGCCGGAGGAGATGATTCGGCTTCCAACTGGTCCGAAAGACCGCTCTGGTGAGGAAGTGCGTCCTGGCCGCCTTGGTGGGGGATTTCCCACTTATGATCGGCACAGTATGTCTGCTGGTCGCTATCGAGACCGTGATGAAGGCGATGGGTCCTGGGGTAGTGGTCGACGATCGTATGGCGGGTTCGATGAGGAACGCAGGGGTCCATCTCCTAGGGCTTCCAATTTCGATCAGCCTTCGAGGGCTGACGAGGTGGATAATTGGGCAATGACGAAGAAATCTCCCGCATTGGATTCGGGTCGACAAAATAGGTACGGGTCGCTAGGCGGTGGCGTGGGTGGAATTGCATCTAGGGCAGACGAGGTCGATAACTGGGCAAGTGTCAAAAAGCCTATTCCATCAAGATCCTCCACATTTGGTTCTGGTTATCGTGAGGCAAACGAGCCTGATCGCTGGGGTAGAGGTCGTTCACGTGATAGTGACACAGAACGACCCCGATTAGTACTGGATCCACCTAAAGGTAATGTCGTTACAAATGAAGCAACGAGGACGAACAAGCCAAGTCCTTTTGGAGCAGCAAGGCCGAGAGAGGAGGTTTTGGCTGAGAAGGGGTTGGATTGGAAGAAGCTGGATACAGAAATTGAGGCCAAAAGAACCAGTAGGCCAACCAGTGCTCACTCTAGCAGGCCTTCGAGTGCTCAATCCAGCCGTTCGGAGGGTCCAGGATTACAGGGCGTAGAAAATGTGGTGAAGCCGAGGCCAAAAGTCAATCCATTCGGGGATGCTAAACCTAGGGAAGTTTTGCTGGAGGAACGTGGCAAGGACTGGCGAAAGATAGATCTTCAACTTGAGCATCGTTCTGTTGACAGGCCTGAAACAGAAGAGGAAAAGATGTTGAAAGAGGAAATTGATGTCCTAAGGAAGGAACTTGAGGAAGGTTTATCTCTGAATGCTAACAAAGAATCGGCGCAAGAATCTGCAGGAGAGATGCAAAATCTGCGCGACAGAATTAATAAAAAAGAACGTGAACTGGAGACGCTGATCCTTGATTTGGATGATAAAGTTCGCTTTGGGAAGAAAGCCACTGAAAGACCTGGCTCTGGAGCAGGCAGGGCTGCTGTCTTTCCAGAAAGGCCTGGCTCTGGAGCAGGTAGGGCCGCTGTCTTTCCAGAAAGACCGCCTTCTCAAGGATCCTTTGATGAGTCCAGAAGTTTTGAGTCTATAGACAGACCTCGATCACGTGGCACTGCAGATGTATGGAGTAGATCCACTGATGATAGAAAACCAATCCAAGGTGCCAGAGATAGAGGATTTTTGGGCAACAGAGACGTGGAGAGGTCGAGGGATAGATGGTAA 1596 52.32 MSKPWGGIGAWAADAERAEAEEREAQAAAAASQAESKNFPSLREAVSTKPKKKKMSLSEFTMGTLTGPGAGGRQTESQGLTPEEMIRLPTGPKDRSGEEVRPGRLGGGFPTYDRHSMSAGRYRDRDEGDGSWGSGRRSYGGFDEERRGPSPRASNFDQPSRADEVDNWAMTKKSPALDSGRQNRYGSLGGGVGGIASRADEVDNWASVKKPIPSRSSTFGSGYREANEPDRWGRGRSRDSDTERPRLVLDPPKGNVVTNEATRTNKPSPFGAARPREEVLAEKGLDWKKLDTEIEAKRTSRPTSAHSSRPSSAQSSRSEGPGLQGVENVVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLQLEHRSVDRPETEEEKMLKEEIDVLRKELEEGLSLNANKESAQESAGEMQNLRDRINKKERELETLILDLDDKVRFGKKATERPGSGAGRAAVFPERPGSGAGRAAVFPERPPSQGSFDESRSFESIDRPRSRGTADVWSRSTDDRKPIQGARDRGFLGNRDVERSRDRW 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 29377418 29381652 + CrPI670011_08g017000.1 Cre08g1700 506618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g1700 531 MobiDBLite consensus disorder prediction 303 322 - -
Cre08g1700 531 MobiDBLite consensus disorder prediction 1 346 - -
Cre08g1700 531 MobiDBLite consensus disorder prediction 276 302 - -
Cre08g1700 531 Pfam Plant specific eukaryotic initiation factor 4B 1 459 IPR010433 GO:0003743(InterPro)
Cre08g1700 531 Pfam Plant specific eukaryotic initiation factor 4B 457 517 IPR010433 GO:0003743(InterPro)
Cre08g1700 531 Coils Coil 15 37 - -
Cre08g1700 531 Coils Coil 403 430 - -
Cre08g1700 531 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 441 IPR010433 GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)
Cre08g1700 531 MobiDBLite consensus disorder prediction 227 248 - -
Cre08g1700 531 MobiDBLite consensus disorder prediction 117 132 - -
Cre08g1700 531 MobiDBLite consensus disorder prediction 439 531 - -
Cre08g1700 531 MobiDBLite consensus disorder prediction 59 81 - -
Cre08g1700 531 MobiDBLite consensus disorder prediction 483 531 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre02g1472 Cre-Chr2:26656928 Cre08g1700 Cre-Chr8:29377418 8.30E-27 dispersed
Cre08g1700 Cre-Chr8:29377418 Cre02g0781 Cre-Chr2:4665527 4.10E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g1700 K03258 - csv:101206526 918.687