Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre08g1722 ATGGCGGAGAATCCGTACGGCATACGCTCCACTTCCCAATTCCCTCCCAAGTCCTTCCTTTCATCTGACAATCCCATCCTTCCCCTCCATTACCACACCTTGCTTTCCTCCACCAACTTCCGCGATCGGATTCCTGTCTTCGGATCCCATGACTTGTTTTCCACTACTTCCGCCATATCCCAACCCCAACCACCTTCCACTACTCCAGATTTCCCACTCCCAGAAGATGCTCTCACCCTCACCAAGGCCAAAATTCTCTCTCATCCTACCTATCCTCGTTTGCTTCAAGCTTATATTGACTGCCACAAGGTTGGAGCTCCTCCGGAGATAGCTTGCTTGTTGGAGGAAATCCGGCGAGAAAACGACAGTCACAAACAAAACGCCATCTCCACGTGCTTTGGAGCCGATCCCGAGCTCGATGAGTTCATGGAAGCGTACTGTGACATGCTGGTGAAGTATAAATCAGATCTCTCGAGGCCCTTTCATGAAGCTTCTTCCTTCTTGAACAGCATTCAACTGCAACTTAGCGACCTCTGCGCTGGTGCTTCCACCAGAACCCCTTCCATGCTACCCAATACTGCTGTTTGA 588 50.68 MAENPYGIRSTSQFPPKSFLSSDNPILPLHYHTLLSSTNFRDRIPVFGSHDLFSTTSAISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCHKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNSIQLQLSDLCAGASTRTPSMLPNTAV 195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 29493313 29499459 - CrPI670011_08g017220.1 Cre08g1722 506640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre08g1722 195 SMART KNOX1_2 79 123 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
Cre08g1722 195 Pfam KNOX2 domain 133 179 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
Cre08g1722 195 PANTHER FUSED COMPOUND LEAF 1 75 189 - -
Cre08g1722 195 Pfam KNOX1 domain 82 122 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
Cre08g1722 195 SMART KNOX2_2 129 180 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g2572 Cre-Chr6:33393137 Cre08g1722 Cre-Chr8:29493313 2.10E-22 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre08g1722 - - - 0.0