Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre09g0053 | ATGGACAGTTTATGGGATGTTTTGGTAGTGACAGCCATTTTTTTGACCACCATTATTCTCTATAGGAACTGCTTTAGACTTCTCAGATCAAAATTCTGCAACAAACTCCCTTTGGGATCTCTTGGCTGGCCTTTCATTGGTGAGACTATTGAGTTCATCTCCTGTGCTTATTCGGACCGTCCCGAAACCTTCATGGACAAGCGTTGTCGCCTCTATGGGAAGGTGTTCAAGTCACATATTTTTGGAAGTCCTACCATTGTTTCTACTGATGCAGAAGTCAGTAAGTTCATTCTGCAAAGTGATGCCAAGGCTTTTGTACCGTCTTATCCGAAATCTTTAACAGAATTGATGGGGAAGTCCTCTATTTTGCTGATAAATGGGAGCTTGCAGAAGAGAATTCATGGTCTTGTGGGAGCTTTCTTCAAGTCTTCACATCTCAAAGCTCAAATAACCAAGGATATGGAGTGTTATGTCAAACTATCAATGGCAAATTGGACTGAGAACAATCCTATTTACCTTCAAGATGAAACCAAAAATATTTCCTTTCAAGTATTAGTAAAGATATTGATTAGTTTACATCCTGGTCAAAGGATGGAGTTTCTCAAGAAACAGTTTCAAGAATTCATAGCTGGGCTCATGGCTTTGCCAGTGAACATACCTGGAAGCAGGCTTTACCAATCCTTGCAGGCCAAAAGGAATATGGTCAAACTAGTAAAGAAGATAATACAAGAGAGAAAAAGCTGTGGAATTTCCCCTGTCCCAAAAGATGTCATGGAAGTTTTGCTCAAAGATGAAAATGAAGAACTAACAGATGATCTAATAGCAGAGAACATGATTGACATGATGATTCCTGGGGAAGATTCAGTGCCAATCTTAATGACTCTTGCAGTAAAATACCTCTCGGATTGCCCTGCCGCACTTCAACAATTAACTGAGGAAAACTTGAAGATGAAAGGACTGAAAGAGCAGCTCGGTGAGGCATTGCATTGGAGCGATTACTTATCGATGCCGTTTACGCAGAGTGTGGTCACTGAGACATTAAGGATGGGAAACATTATAATTGGGGTGATGCGTAAGGCCATGAAAGACATGAGGATAAAAGGATACCTAATACCTAAGGGTTGGTCAGTGCTTACATACTTTAGATCTGTTCATCTTGACCACAATCACTATGACTGCCCTTACAAGTTCAATCCATGGAGGTGGCAAGACAGAGACTTGAGTAGTTGTAACTTCACTCCTTTTGGAGGTGGACAAAGACTATGCCCTGGACTTGACTTAGCCAGGCTTGAAGCTTCCATCTTCCTTCACCACTTTGTCACTCACTTCAGATGGATTGCTGAGGAAGATAGAATCATAAACTTCCCCACAGTGAGGATGAAGAAAAGGATGCCAGTTTGGGTGAAGAGAAGAAGGGACCCATAA | 1425 | 41.4 | MDSLWDVLVVTAIFLTTIILYRNCFRLLRSKFCNKLPLGSLGWPFIGETIEFISCAYSDRPETFMDKRCRLYGKVFKSHIFGSPTIVSTDAEVSKFILQSDAKAFVPSYPKSLTELMGKSSILLINGSLQKRIHGLVGAFFKSSHLKAQITKDMECYVKLSMANWTENNPIYLQDETKNISFQVLVKILISLHPGQRMEFLKKQFQEFIAGLMALPVNIPGSRLYQSLQAKRNMVKLVKKIIQERKSCGISPVPKDVMEVLLKDENEELTDDLIAENMIDMMIPGEDSVPILMTLAVKYLSDCPAALQQLTEENLKMKGLKEQLGEALHWSDYLSMPFTQSVVTETLRMGNIIIGVMRKAMKDMRIKGYLIPKGWSVLTYFRSVHLDHNHYDCPYKFNPWRWQDRDLSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTHFRWIAEEDRIINFPTVRMKKRMPVWVKRRRDP | 474 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 821641 | 825435 | - | CrPI670011_09g000530.1 | Cre09g0053 | 506721 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre09g0053 | 474 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 415 | 424 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cre09g0053 | 474 | PRINTS | E-class P450 group I signature | 340 | 358 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre09g0053 | 474 | PRINTS | E-class P450 group I signature | 412 | 422 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre09g0053 | 474 | PRINTS | E-class P450 group I signature | 69 | 88 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre09g0053 | 474 | PRINTS | E-class P450 group I signature | 380 | 404 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre09g0053 | 474 | PRINTS | E-class P450 group I signature | 422 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre09g0053 | 474 | SUPERFAMILY | Cytochrome P450 | 34 | 471 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre09g0053 | 474 | CDD | CYP90-like | 68 | 466 | - | - | |
| Cre09g0053 | 474 | Pfam | Cytochrome P450 | 38 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre09g0053 | 474 | FunFam | 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 | 27 | 471 | - | - | |
| Cre09g0053 | 474 | PANTHER | CYTOCHROME P450 26 | 35 | 447 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) | |
| Cre09g0053 | 474 | Gene3D | Cytochrome P450 | 29 | 471 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cre09g0053 | 474 | Coils | Coil | 307 | 327 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre09g0053 | Cre-Chr9:821641 | Cre09g1177 | Cre-Chr9:13635051 | 1.10E-57 | dispersed | |
| Cre01g0515 | Cre-Chr1:4437417 | Cre09g0053 | Cre-Chr9:821641 | 1.90E-72 | transposed | |
| Cre04g1607 | Cre-Chr4:34527958 | Cre09g0053 | Cre-Chr9:821641 | 8.00E-138 | transposed | |
| Cre06g0929 | Cre-Chr6:2701168 | Cre09g0053 | Cre-Chr9:821641 | 3.00E-60 | transposed | |
| Cre06g1172 | Cre-Chr6:5558709 | Cre09g0053 | Cre-Chr9:821641 | 5.00E-79 | transposed | |
| Cre07g0766 | Cre-Chr7:5905717 | Cre09g0053 | Cre-Chr9:821641 | 6.70E-94 | transposed | |
| Cre07g1284 | Cre-Chr7:26888916 | Cre09g0053 | Cre-Chr9:821641 | 1.40E-91 | transposed | |
| Cre10g0597 | Cre-Chr10:5467411 | Cre09g0053 | Cre-Chr9:821641 | 6.90E-67 | transposed | |
| Cre11g0978 | Cre-Chr11:7060392 | Cre09g0053 | Cre-Chr9:821641 | 7.60E-85 | transposed | |
| Cre07g1726 | Cre-Chr7:32709784 | Cre09g0053 | Cre-Chr9:821641 | 3.00E-174 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre09g0053 | K12638 | - | csv:101217830 | 873.618 |