Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0060 ATGAAAACTGCAGAAATTTCCTTTGAAATTGGGACTCTGATGGGGTTTCGATTACTGTTTCTGCTGTTCCAAATTTATTTTGCTGTTAGCTCTTTCTCTGTCTGTGAAGCTGCAGTTATTCTCCCAGGCAGGCCGAGTGGATCGCGTTCTGCACTCCCAGACCATGCTGTCACTCCAACATCTCATGGCTTTGGCAGGAAACACCATGGCAATTTGGATAATGCAGCCCCTAGCAAACCATTTAAAAGTTCATCTCCTCAGATCCATTCTCATTATAAAGCCATTCAATCAGATGATTCAAGTAGAGCTCCTAGCATTGCACTTCCGCCCACCGCGCCTGCTAAGAAATGGGGGCACGAACATACACTCTCACCATTGATCTCTTTTCATAAATTTCGCCATTCAAGAAGGAAGTTCAGGAACAATGCTCCACAGCCTACTTATCATGCATCGCCCCCGACGAGCAGCCAGAAAGGCCCTGCTGCTGTCTCTCCAATTCAGTCACCGTTACCATCTGTAGTGAGAGGGAGGTCGCCCGGACCTGCACCATCACCAACAATTCAGCCCAACCACTATTATATGCCCATTCCTGCACCTACAACTTCTCCTATGGGTTCTTACAAGAAGAAGAAGAGTATGCCACCATCACAAGTTATGATTCTACCACCTCCACCTCCTAATGGGGATTGTACAATAGCATGTACAGAGCCATTGACATATACGCCTCCCGGGACGCAATGTGGCTGCGTGTGGCCAATTCAAGTCAAAATCATTCTTGATGTTGCAGTATACACGTTTTTTCCTCTGGTTTCAGAACTTGCAGAGGAAATTGCTGACAGTATCAGTCTGAACCAAAGCCAAGTTCGAATTATGGGAGCCGATGCTGCTAGTCAGCAGTTAGAAAAAACGACTGTCCTCATCAACTTGGTTCCGAGAGGATCAAAATTCAATCATAACACAGCCTTTTTTATATATCAGAAATTTTGGCGGAGAAAGATATTCATCAACCCTTCTTTGTTTGGAAGATATCAAGTACTAAATGTCAAATATCCAGGTCTTCCGCCATCTCCTCCATTGGCGCCTTCAGGTACGTCGTCTATTAATGATGGTTTGAACACTAGCAATACTAATGCTGGAAATGCAATTAAACCGTTGGGAGTTGACGTGCCAAGACGAAAAAAAGAAGGGCTTGGCAGAAACATGATCGCGGTGATTACTATATCATCGTTCACTGCCCTTGTCATGTGTGTTGGGCTTGCTTGGCTTTGCCTGTTGAGATGCAGAGTGTCTACACATCAACCAGCACAAACTCCACAAAACTTGATAGCCTCACCTACAAAACCACCAGGCACTGCTGGATTGATAATGGTTGGAAGTGAACCTGGTTCTTCATCCATGCCTCTCGATGCCGATCCTATGACGTATATTGGAGCTGCAAAGAACTTCACCTTGAAAGATATGGAGAAAGCCACTGACAACTTCGATACTGCAAGAATATTAGGAGAAGGTGGCTTTGGAATTGTATACAGTGGCAGTTTAGACGATGGAAGAGAAGTGGCTGTGAAGGTTCTTAAACGACATAATCAACATGGTATTCGGGAATTCTTGGCAGAAGTCGAGATGCTGAGCCGTCTACACCATAGAAATCTAGTTAAGTTGATTGGTATCTGCACAGAAGATCAGATTCGCTGCCTGGTATATGAATTGGTTCCTAATGGAAGTGTCGAATCACACTTACATGGCATTGACAAGTTAACCAGTCCACTTGACTGGGATGCCCGCATGAAGATTGCCCTTGGTGCTGCTCGAGGCCTAGCCTATCTGCATGAAGACTCCAATCCTCGAGTCATTCATCGAGACTTCAAAGCTAGCAACATCTTGTTGGAATATGACTTTACACCTAAAGTTTCAGATTTTGGATTAGCTAGAACTGCACTAGAGGAAGGAAACAAGCACATCTCAACACATGTCATGGGAACTTTTGGTTATCTAGCTCCAGAATATGCAATGACTGGCCACCTTCTTGTAAAGAGCGATGTCTATAGCTATGGTGTTGTCCTTCTTGAGCTGCTTACAGGAAGAAAGCCAGTAGACTTGTCACTTCCACCCGGACAAGAAAATCTTGTTGCTTGGGCTCGTCCGCTTCTCACGAGCAAGGAAGGATTAGATGCAATAACAGACCCAGCTATCAAGTCTGACATCTCCATTGATAGCTTGGCCAGAGTAGCAGCGATTGCTTCAATGTGTGTACAGCCAGAAGTATCTCACAGACCATTTATGGGTGAGGTTGTTCAAGCCCTGAAACTCGTTTGCAATGAATTTGAAGAAACTAACGATCCAGTTTCACGAAGTTACAGCCGAGACGAACTTCTAAGTTACATGGATAGTAAATTTGGAGGAATTTCCGGTGAAATACTAAACGCTCCTGAGACCTCGCACACCTTTCCTTCAGGAAAAGAGAAGAATGTAGGATTATCGGCATCGGATTTGATCAGTGCATCTGCAAGATTTGAAGGACAGGAACTGGTTTCTTCTAGATGGCATTCATCAAACTCGGAACCATTAAGAACTGGAAGAAAAAAGCAGTTATGGCAGAAGCTAAGAAGTTTCTCACGAGGCAGCTTCAGTGAACATGGCTTTTCTGCAAAGTTTTGGCCTGGATTTCGTTAG 2670 44.46 MKTAEISFEIGTLMGFRLLFLLFQIYFAVSSFSVCEAAVILPGRPSGSRSALPDHAVTPTSHGFGRKHHGNLDNAAPSKPFKSSSPQIHSHYKAIQSDDSSRAPSIALPPTAPAKKWGHEHTLSPLISFHKFRHSRRKFRNNAPQPTYHASPPTSSQKGPAAVSPIQSPLPSVVRGRSPGPAPSPTIQPNHYYMPIPAPTTSPMGSYKKKKSMPPSQVMILPPPPPNGDCTIACTEPLTYTPPGTQCGCVWPIQVKIILDVAVYTFFPLVSELAEEIADSISLNQSQVRIMGADAASQQLEKTTVLINLVPRGSKFNHNTAFFIYQKFWRRKIFINPSLFGRYQVLNVKYPGLPPSPPLAPSGTSSINDGLNTSNTNAGNAIKPLGVDVPRRKKEGLGRNMIAVITISSFTALVMCVGLAWLCLLRCRVSTHQPAQTPQNLIASPTKPPGTAGLIMVGSEPGSSSMPLDADPMTYIGAAKNFTLKDMEKATDNFDTARILGEGGFGIVYSGSLDDGREVAVKVLKRHNQHGIREFLAEVEMLSRLHHRNLVKLIGICTEDQIRCLVYELVPNGSVESHLHGIDKLTSPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEYDFTPKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSLPPGQENLVAWARPLLTSKEGLDAITDPAIKSDISIDSLARVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEFEETNDPVSRSYSRDELLSYMDSKFGGISGEILNAPETSHTFPSGKEKNVGLSASDLISASARFEGQELVSSRWHSSNSEPLRTGRKKQLWQKLRSFSRGSFSEHGFSAKFWPGFR 889
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 870886 875195 - CrPI670011_09g000600.1 Cre09g0060 506728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0060 889 FunFam Receptor-like serine/threonine-protein kinase ALE2 570 787 - -
Cre09g0060 889 MobiDBLite consensus disorder prediction 141 163 - -
Cre09g0060 889 Pfam Protein tyrosine and serine/threonine kinase 497 767 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre09g0060 889 CDD STKc_IRAK 500 768 - -
Cre09g0060 889 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre09g0060 889 Gene3D Transferase(Phosphotransferase) domain 1 570 789 - -
Cre09g0060 889 ProSiteProfiles Protein kinase domain profile. 494 775 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g0060 889 FunFam receptor-like serine/threonine-protein kinase ALE2 468 569 - -
Cre09g0060 889 Gene3D Phosphorylase Kinase; domain 1 465 569 - -
Cre09g0060 889 MobiDBLite consensus disorder prediction 77 104 - -
Cre09g0060 889 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524(InterPro)
Cre09g0060 889 MobiDBLite consensus disorder prediction 176 192 - -
Cre09g0060 889 MobiDBLite consensus disorder prediction 45 117 - -
Cre09g0060 889 PANTHER OS01G0750732 PROTEIN 230 788 IPR050885 -
Cre09g0060 889 SUPERFAMILY Protein kinase-like (PK-like) 474 767 IPR011009 -
Cre09g0060 889 MobiDBLite consensus disorder prediction 141 215 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g0511 Cre-Chr7:2886403 Cre09g0060 Cre-Chr9:870886 8.20E-171 dispersed
Cre07g1160 Cre-Chr7:23876408 Cre09g0060 Cre-Chr9:870886 9.30E-34 dispersed
Cre09g0060 Cre-Chr9:870886 Cre10g1311 Cre-Chr10:26393469 4.80E-104 dispersed
Cre03g1825 Cre-Chr3:35163419 Cre09g0060 Cre-Chr9:870886 2.00E-208 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64375 PF07714 PK_Tyr_Ser-Thr 6.30E-47 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0060 - - - 0.0