Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0072 ATGGCAACTCCCATGGCTGAAGAAGCAACCATCGATTCCAATTCCACTGCCCACACGGTGATCGCGATTAGTAGGGACAAGAACAGTAAATATGCGGTTAAATGGGCTGTGGAACACCTGTTCAATAGGAAGAACACTGGCGATTGCATCCTTATCCATGTTCGCAACCAGAGTTTGCATCCCCAGGAGGCGGATGCGGTGCCTAAGGAGTATCGTCCACCGACTGAAGCAGAGTTGCATCAGTTCTTCCTTCCCTATCGAGGATTCTGCGCACGAAAAGGAATAGTTACAAAGGAGATAATCATCCATGACATTGATGTTCCAAGTGCACTTATTGACTATGTCAGTAAACACTCCATTAGCAATATTGTTGTGGGTGCTTCCAGCCGGAATGCTATTTTGAGGAAGTTCAAGAATCCCGATGTCCCAACGTGCTTACTCAAATCAACTCCAGAATCATGCTCTGTATATGTCATAGCTAGAGGAAAAGTTCATACTAAGAGATTGAGAAAGCGACATAAGTCACAAACTGATGCGAGAGAAACTCAAACCAGAACTCCAGAAATCGACAGGTCTCTATCAAAAATACAAAAATCAGCATATTCTAATATCTCAGAACTATCTGAAGATAGAAACAGGGATAGTTCTGGCACCAGTAATGATTCAATGTCAGGCATTAGTGACTTTTCGGGGCCTCTCAGTTTCAAATCAATTGAAACATCCTTTGAGAGCCTAGATTTTTCCTTAACCTCCTCAGAGACTAGTACGAGGAGCTTTGTCTCCTCTAACACCCCACCTTCCATTGAATCTGAGATGAGAAAGTTGAGGTTTGAACTCAAACAGACGATGGAAATGTATGACTCAGCTTCCAAGGAAGCTGTAGTAGCAAAACAAAAGGCAAATGAACTCCAACAGTTGAAGATGGATATGGAAGAAGACAGAAAAATTGAGCGTGGTAAATCTGCAGAAGAGGTTCTTAGAGCATTGGCAGAGTTTGAGAAGCAGAAGAACAAGGCTGCGACAGAAGCAGCTCTAATGGCACAGAAGTTAGCCGAATTAGAGAACCAGAAAAAACGAATTGTTACTGAAGAAAAAGCTAGGATTGAGGCAGAGGAGAGGAAGAAAACAATGGAGTTATTTGAACGCAGTAATATCTGTTATAGACGATACAGCATTGACGAGATCGAAGCTGCAACAGATCATTTTAATGAGTCAAACAAGATTGGTGAAGGTGGCTATGGACCTGTTTACCAAGCCTTACTTGATCATACTCCTGTTGCCATTAAGATATTGCGACCAGATAGATCTCATGGGCAGAGACAATTCCAGCAAGAGATTGAGGTTCTAAGCCGCATGAGGCATCCGCACATGGTTCTCCTCTTAGGTGCCTGCCCAGAATACGGTTGCCTTGTTTATGAATATATGGAAAACGGGAGTTTGGAAGACCGTCTCTTCCAAAAAGATAACACTCCTCCAATGCCTTGGAGAACACGTTTCAGGATAGCTTCTGACATTGCCACTGCCCTACTCTTCCTTCATCAAATGAAGCCAGAACCTGTGGTGCATCGTGATCTCAAGCCAGCCAACATTCTCTTAGATCACAACTACGTGAGCAAAATAGGTGATGTGGGTTTGGCCAGGCTAGTTCCACCATCGGTTGCTGATAGTGTCACTCAATATCACATGACTGCTGCAGCTGGAACCTTCTGTTACATTGATCCAGAATATCAACAAACAGGAATGTTGGGGGTGAAATCAGATATTTACTCATTTGGTGTTCTGCTACTTCAGCTCATCACTGCAAGGTCACCGATGGGTCTTTCATATCAGGTTGAGGAGGCCATTGAACATGGCAAATTCCCGCAGATACTTGATCCTGCCATTACAGATTGGCCTATTGAAGATACTCTTGGACTCGCTCAATTAGCCCTGAAGTGCTGTGAGCTAAGGAAAAGAGATAGGCCCGACCTCCGTACAGTTCTATTGCCAGAACTGGTCAGGTTAAAAAATCTGGGGTCAGGCGAAATGCCACCAAAGGGCAAGCTCCCAAATGTTGGCAAAGCACGTGATCAACGGGCTTCCAACTCAGTTCCAATTTTGAATGGATCAGAGAGTGAGATCTATGTGAGAAAAAGATGGCAGCGATTGAAAGTGAGTACGAGATTTTGGAGCCAAAAGGGTATTGGTTTGAATACCGTTTCTCCGCAGATAAAGAAAAAATGGAGCTGGAACAACAGTGATGCAAAAGTCTTAAATATACCATTACCAATGAGTGGAAAACAAGTTGATGTACTCTCAAAAAAGCAGCAAAGCTCTGAACGCTGTTGGTCTTTTGTAGGTTGTGCTTCTGCTGCTACTATGGGGTTGAAGAAACTACACTCATTTTCATAA 2391 43.5 MATPMAEEATIDSNSTAHTVIAISRDKNSKYAVKWAVEHLFNRKNTGDCILIHVRNQSLHPQEADAVPKEYRPPTEAELHQFFLPYRGFCARKGIVTKEIIIHDIDVPSALIDYVSKHSISNIVVGASSRNAILRKFKNPDVPTCLLKSTPESCSVYVIARGKVHTKRLRKRHKSQTDARETQTRTPEIDRSLSKIQKSAYSNISELSEDRNRDSSGTSNDSMSGISDFSGPLSFKSIETSFESLDFSLTSSETSTRSFVSSNTPPSIESEMRKLRFELKQTMEMYDSASKEAVVAKQKANELQQLKMDMEEDRKIERGKSAEEVLRALAEFEKQKNKAATEAALMAQKLAELENQKKRIVTEEKARIEAEERKKTMELFERSNICYRRYSIDEIEAATDHFNESNKIGEGGYGPVYQALLDHTPVAIKILRPDRSHGQRQFQQEIEVLSRMRHPHMVLLLGACPEYGCLVYEYMENGSLEDRLFQKDNTPPMPWRTRFRIASDIATALLFLHQMKPEPVVHRDLKPANILLDHNYVSKIGDVGLARLVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGVKSDIYSFGVLLLQLITARSPMGLSYQVEEAIEHGKFPQILDPAITDWPIEDTLGLAQLALKCCELRKRDRPDLRTVLLPELVRLKNLGSGEMPPKGKLPNVGKARDQRASNSVPILNGSESEIYVRKRWQRLKVSTRFWSQKGIGLNTVSPQIKKKWSWNNSDAKVLNIPLPMSGKQVDVLSKKQQSSERCWSFVGCASAATMGLKKLHSFS 796
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 967500 971686 - CrPI670011_09g000720.1 Cre09g0072 506740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0072 796 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 374 474 - -
Cre09g0072 796 SUPERFAMILY Protein kinase-like (PK-like) 379 661 IPR011009 -
Cre09g0072 796 Gene3D Phosphorylase Kinase; domain 1 369 474 - -
Cre09g0072 796 MobiDBLite consensus disorder prediction 167 226 - -
Cre09g0072 796 Gene3D HUPs 5 160 IPR014729 -
Cre09g0072 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre09g0072 796 Coils Coil 322 373 - -
Cre09g0072 796 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 159 - -
Cre09g0072 796 Pfam Protein kinase domain 403 660 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g0072 796 CDD STK_N 19 162 - -
Cre09g0072 796 PANTHER OS02G0152300 PROTEIN 21 681 IPR051348 -
Cre09g0072 796 Pfam Universal stress protein family 20 135 IPR006016 -
Cre09g0072 796 Gene3D Transferase(Phosphotransferase) domain 1 475 671 - -
Cre09g0072 796 SMART serkin_6 402 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g0072 796 Coils Coil 272 316 - -
Cre09g0072 796 MobiDBLite consensus disorder prediction 175 192 - -
Cre09g0072 796 ProSiteProfiles Protein kinase domain profile. 402 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g0940 Cre-Chr8:22594997 Cre09g0072 Cre-Chr9:967500 2.70E-183 dispersed
Cre09g0072 Cre-Chr9:967500 Cre11g1565 Cre-Chr11:25312035 1.30E-153 dispersed
Cre11g0662 Cre-Chr11:3696276 Cre09g0072 Cre-Chr9:967500 1.70E-115 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64376 PF00069 Pkinase 5.00E-42 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0072 - - - 0.0