Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0075 ATGGATAGGGTTTACACGTCACTCATAGGTTCGAACGACCCGCCGCCTAGCGCCCCAACAAAGAAGGAAACCCTAACAAAGCGAAGCCAGCCAATTTTCCTAATCCCATACCGCCACGTGTCAGTCATCTTTTTCCCTTTCTTTTATCTTTCCCTCACTCCTCTTTCCACTCATCCGGTTTCCCTTCTGCTTCTCCGACCGCCATTGCCACCCAATCGGAGCCCTAAAATTCCTTCTTCCATTGGTTTCCCTCGAATTTTTCTCCGCTTGGAGAAGGTGGCGAAGATGAATCTAGGTGCGGCGGAGGAAGAATCGCCGCAGGAGATTCATATTCCGGCCGAAATCGATTGGCAAATGCTCGATAAATCTAAATTCTTCTTTCTCGGTGCAGCGTTGTTTTCAGGTGTTTCGGCTTCTCTTTACCCTATGGTGGTGTTGAAAACTCGGCAACAGGTTGCTCATTCGCAACTTCCTTGCATCAGAACTGCATTTTCACTTGTCCGCCATGAAGGTTTTCGAGCTCTCTACCGAGGATTTGGTACTTCTCTAATGGGGACTATCCCGGCTAGAGCTCTATACATGGGAGCTCTTGAGATTACAAAGAGCTATGTCGGAACTGCCACCATTAAAGTGGGATTTCCAGAGACTACTGCAGCTACCATGGCTAACGCAGCTGCTGGATTGAGTGCTGCAATGGCAGCTCAGCTTGTATGGACTCCTGTTGATGTTGTGAGTCAAAGGCTCATGGTTCAACCTAGCTACAACAATCCCAATTCTTCCTCAACTCATTACATCAATGGAATCGATGCATTTAGAAAGATCCTCAATGCCGATGGCCTCCGAGGCCTCTACCGAGGATTCGGGATATCGATTTTGACCTACGCACCGTCGAATGCTGTGTGGTGGGCTTCTTATTATGTAGCTCAGCGGCTAGTTTGGGGTGGAATTGGCTGCTGTTATTATGCAAAGAAGGTTGATGAAGGCAATGAAAATGGGGGTTGTAGTAATGTCTACAAACCGGATTCCAAGACTGTGATTGCGGTTCAGGGGGCGAGCGCAGCAATGGCCGGGAGTATATCGGCTTTGATAACAATGCCACTTGATACAATCAAGACAAGATTGCAAGTTTTGGATGGGGATGAAAATGGGAGAAGAGGGCCAACTATAGGACAGACATTGAGGAATTTGGTAAGGGAAGGAGGGTGGACGGCATGTTACCGAGGCTTGGCACCGCGATGCGCATCAATGTCGATGTCTGCAACGACGATGATCACTACATATGAGTTTTTGAAACGGCTATCAACAAAGAATCAAGAGAGTTTAACAAGCTAA 1332 47.67 MDRVYTSLIGSNDPPPSAPTKKETLTKRSQPIFLIPYRHVSVIFFPFFYLSLTPLSTHPVSLLLLRPPLPPNRSPKIPSSIGFPRIFLRLEKVAKMNLGAAEEESPQEIHIPAEIDWQMLDKSKFFFLGAALFSGVSASLYPMVVLKTRQQVAHSQLPCIRTAFSLVRHEGFRALYRGFGTSLMGTIPARALYMGALEITKSYVGTATIKVGFPETTAATMANAAAGLSAAMAAQLVWTPVDVVSQRLMVQPSYNNPNSSSTHYINGIDAFRKILNADGLRGLYRGFGISILTYAPSNAVWWASYYVAQRLVWGGIGCCYYAKKVDEGNENGGCSNVYKPDSKTVIAVQGASAAMAGSISALITMPLDTIKTRLQVLDGDENGRRGPTIGQTLRNLVREGGWTACYRGLAPRCASMSMSATTMITTYEFLKRLSTKNQESLTS 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1038528 1040149 + CrPI670011_09g000750.1 Cre09g0075 506743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0075 443 ProSiteProfiles Solute carrier (Solcar) repeat profile. 344 433 IPR018108 -
Cre09g0075 443 PRINTS Mitochondrial carrier protein signature 227 249 IPR002067 GO:0055085(InterPro)
Cre09g0075 443 PRINTS Mitochondrial carrier protein signature 176 194 IPR002067 GO:0055085(InterPro)
Cre09g0075 443 ProSiteProfiles Solute carrier (Solcar) repeat profile. 121 203 IPR018108 -
Cre09g0075 443 ProSiteProfiles Solute carrier (Solcar) repeat profile. 218 311 IPR018108 -
Cre09g0075 443 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 102 439 - -
Cre09g0075 443 Gene3D Mitochondrial carrier domain 125 442 IPR023395 -
Cre09g0075 443 SUPERFAMILY Mitochondrial carrier 118 430 IPR023395 -
Cre09g0075 443 Pfam Mitochondrial carrier protein 131 205 IPR018108 -
Cre09g0075 443 Pfam Mitochondrial carrier protein 348 436 IPR018108 -
Cre09g0075 443 Pfam Mitochondrial carrier protein 220 312 IPR018108 -
Cre09g0075 443 MobiDBLite consensus disorder prediction 10 24 - -
Cre09g0075 443 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g0075 Cre-Chr9:1038528 Cre10g0424 Cre-Chr10:3103829 1.00E-09 dispersed
Cre11g0975 Cre-Chr11:6996549 Cre09g0075 Cre-Chr9:1038528 2.30E-71 transposed
Cre05g1982 Cre-Chr5:31905459 Cre09g0075 Cre-Chr9:1038528 1.80E-121 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0075 K15121 - csv:101210602 628.632