Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre09g0097 | ATGGCGAATTTCCATCGCTCTTCTTCACTTTTCTTCTTCTTCATCTTCTGTTTCGTCCCTGTAATTTTCTCTCGATCTCCGGATAATCAAGAGACATTCATCGTTCATGTCTCTAAATCGGAGAAGCCTTCTTTATTTTCCTCCCATCGTCACTGGCACTCTTCCATTCTCGAATCACTCTCTCCTTCTCCTCATCCGACGAAGCTTCTTTACAACTACGAACATGCCGTTAATGGATTCTCCGCACGCATCACGGCTGCTCAGGCGGCGGAGCTGCGTCATGTTCCCGGTGTTATTTCGGTGATTCCTGATCGGATCCGTCAGCTTCATACGACTCGGACGCCTCATTTCTTGGGACTGGCGGATAACCTAGGGCTCTGGCCTGACACGAATTATGCCGAAGATGTGATTATTGGCGTTCTTGATACCGGAATTTGGCCGGAGAGGCCGAGTTTCTCCGATGAAGGTTTGTCTCCGGTTCCGGCAAGCTGGAAAGGCACCTGCGAGGCTGGGGAGGGATTTTCGGCTTCGACCTGTAATCGGAAGATTATTGGTGCGAGAGCGTACTTTAACGGATACGAGTCTAATTTAGGAAGATCGCTTCGTTCTTCGGATTTCAAATCTGCTAGGGATTCGGATGGCCATGGAACTCACACGGCCTCTACGGCTGCAGGTTCGTTCGTTAAAAATGCTAGTTTTTTCCAATACGCTCGTGGAGAAGCCAGAGGAATGGCGAGTAGAGCTCGTATCGCTGCCTACAAGATCTGCTGGGAATTTGGTTGTTTCGATTCTGACATACTCGCCGCTATGGATCAGGCGATTGCCGATGGCGTTCACATCATCTCTCTCTCAGTCGGATCCTCGGGCCGTGCGCCCGCGTACTATCGAGATTCCATTGCAATTGGAGCGTTTGGGGCAATGCAGCACGGTGTCGTCGTCTCTTGCTCCGCCGGTAATTCCGGTCCCGGTCCTTACACGGCTGTGAACATCGCTCCTTGGATCCTCACCGTCGGTGCCTCCACAATCGACAGGGAGTTTCTTGCCGATGTCATTCTCGGAGACGGCAGGGTTTTCAGCGGCGTGTCGCTGTACTCCGGCGAACCCCTTGGCGATTCCAAGCTTCCGTTGGTCTACGGTGGAGATTGCGGTAGCAGGTATTGTTATTCTGGATCCCTCGATCCGGCGAAAGTCGCAGGAAAACTTGTCGTGTGCGACCGAGGAGGGAACGCCAGAGTCGCCAAAGGAGGCGCAGTGAAGTCCGCCGGTGGTCTTGGTATGGTACTCGCCAATACGGAGGAAAACGGCGAAGAGCTCTTAGCAGATTCTCATCTTATTCCAGGAACAATGGTCGGTGAAATCGCCGGCAACAAGCTTAGAAACTACATCCATTCGGATCCGAATCCAACTGCTACAATCGTGTTTCGCGGAACTGTCATTGGCAATTCGCCTTCAGCTCCGAGAGTCGCCGCCTTCTCCAGCCGTGGTCCGAACTACCGGACGGCGGAGATTCTAAAACCAGATGTTATAGCTCCGGGAGTTAACATTTTGGCCGGCTGGAGCGGCTACAGCAGTCCGACCAGTCTAAGCATCGATTCTCGAAGAGTCGAGTTCAATATCATCTCCGGAACTTCAATGTCTTGCCCTCACGTCAGTGGCGTCGCCGCCTTGCTCCGTAAGGCTTTTCCGACGTGGTCACCGGCTGCTATCAAATCTGCTCTGATCACTACTTCTTACTCTTTGGACAGTTCCGGCAGCCCAATCAAAGATCTCTCCACCAGCAAAGAATCAAATCCATTCGTCCATGGCGCCGGCCACATCGATCCCAACAAAGCTCTGAATCCAGGCCTGATTTATGATCTCACTCCTCAAGACTACGTTTCATTTCTCTGCTCAATCGGTTACGACTCTAGACAAATAGCTGTTTTCGTGAAGGATTCTTCATACTCCCAACTATGTGAGCACAAACTGAGCAATCCAGGCAACCTGAATTACCCATCATTCTCCGTCGTGTTCGACGGCGAGGAGGTGGTGAAATATACAAGAACAGTGACAAATGTAGGAGATGAAACTGATGTTTATGAAGTGAAAGTAGAATCCCCACAAGGAGTTGAAATCAGTGTTGTTCCAAACAAGCTGGAGTTCAATGCAAAGAAGACAACACAGTCTTATGAGATTACATTCACCAAAATCAGTGGATTCAAGGAATCAGCAAGCTTCGGATCAATTCAATGGAGTGATGGAAGCCACAATGTTAGGAGTCCAATTGCTGTCTCGTTCAACACTGGACCCATAGCTTCGATGTAA | 2304 | 50.39 | MANFHRSSSLFFFFIFCFVPVIFSRSPDNQETFIVHVSKSEKPSLFSSHRHWHSSILESLSPSPHPTKLLYNYEHAVNGFSARITAAQAAELRHVPGVISVIPDRIRQLHTTRTPHFLGLADNLGLWPDTNYAEDVIIGVLDTGIWPERPSFSDEGLSPVPASWKGTCEAGEGFSASTCNRKIIGARAYFNGYESNLGRSLRSSDFKSARDSDGHGTHTASTAAGSFVKNASFFQYARGEARGMASRARIAAYKICWEFGCFDSDILAAMDQAIADGVHIISLSVGSSGRAPAYYRDSIAIGAFGAMQHGVVVSCSAGNSGPGPYTAVNIAPWILTVGASTIDREFLADVILGDGRVFSGVSLYSGEPLGDSKLPLVYGGDCGSRYCYSGSLDPAKVAGKLVVCDRGGNARVAKGGAVKSAGGLGMVLANTEENGEELLADSHLIPGTMVGEIAGNKLRNYIHSDPNPTATIVFRGTVIGNSPSAPRVAAFSSRGPNYRTAEILKPDVIAPGVNILAGWSGYSSPTSLSIDSRRVEFNIISGTSMSCPHVSGVAALLRKAFPTWSPAAIKSALITTSYSLDSSGSPIKDLSTSKESNPFVHGAGHIDPNKALNPGLIYDLTPQDYVSFLCSIGYDSRQIAVFVKDSSYSQLCEHKLSNPGNLNYPSFSVVFDGEEVVKYTRTVTNVGDETDVYEVKVESPQGVEISVVPNKLEFNAKKTTQSYEITFTKISGFKESASFGSIQWSDGSHNVRSPIAVSFNTGPIASM | 767 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 1216869 | 1219172 | - | CrPI670011_09g000970.1 | Cre09g0097 | 506765 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre09g0097 | 767 | Pfam | Fibronectin type-III domain | 661 | 757 | IPR041469 | - | |
| Cre09g0097 | 767 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 22 | 110 | IPR037045 | - | |
| Cre09g0097 | 767 | Gene3D | - | 629 | 760 | - | - | |
| Cre09g0097 | 767 | Gene3D | Peptidase S8/S53 domain | 135 | 625 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Cre09g0097 | 767 | CDD | PA_subtilisin_like | 349 | 472 | - | - | |
| Cre09g0097 | 767 | FunFam | Subtilisin-like protease SBT1.5 | 629 | 760 | - | - | |
| Cre09g0097 | 767 | SUPERFAMILY | Subtilisin-like | 109 | 616 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
| Cre09g0097 | 767 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 542 | 552 | IPR023828 | - | |
| Cre09g0097 | 767 | CDD | Peptidases_S8_3 | 108 | 578 | IPR034197 | - | |
| Cre09g0097 | 767 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 32 | 755 | IPR045051 | - | |
| Cre09g0097 | 767 | FunFam | Subtilisin-like protease SBT1.5 | 135 | 355 | - | - | |
| Cre09g0097 | 767 | Pfam | PA domain | 374 | 458 | IPR003137 | - | |
| Cre09g0097 | 767 | Pfam | Peptidase inhibitor I9 | 32 | 110 | IPR010259 | - | |
| Cre09g0097 | 767 | Gene3D | - | 343 | 480 | - | - | |
| Cre09g0097 | 767 | FunFam | subtilisin-like protease SBT1.5 | 343 | 479 | - | - | |
| Cre09g0097 | 767 | Pfam | Subtilase family | 135 | 590 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
| Cre09g0097 | 767 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 108 | 612 | - | - | |
| Cre09g0097 | 767 | PRINTS | Subtilisin serine protease family (S8) signature | 541 | 557 | IPR015500 | - | |
| Cre09g0097 | 767 | PRINTS | Subtilisin serine protease family (S8) signature | 133 | 152 | IPR015500 | - | |
| Cre09g0097 | 767 | PRINTS | Subtilisin serine protease family (S8) signature | 211 | 224 | IPR015500 | - | |
| Cre09g0097 | 767 | FunFam | Subtilisin-like protease SBT1.9 | 22 | 110 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre07g1023 | Cre-Chr7:13417010 | Cre09g0097 | Cre-Chr9:1216869 | 6.30E-201 | dispersed | |
| Cre07g1024 | Cre-Chr7:13502866 | Cre09g0097 | Cre-Chr9:1216869 | 1.70E-193 | dispersed | |
| Cre08g1580 | Cre-Chr8:28349022 | Cre09g0097 | Cre-Chr9:1216869 | 1.50E-202 | dispersed | |
| Cre08g1589 | Cre-Chr8:28443645 | Cre09g0097 | Cre-Chr9:1216869 | 1.80E-139 | dispersed | |
| Cre09g0097 | Cre-Chr9:1216869 | Cre09g0122 | Cre-Chr9:1497427 | 1.10E-202 | dispersed | |
| Cre01g0873 | Cre-Chr1:11809261 | Cre09g0097 | Cre-Chr9:1216869 | 4.90E-81 | transposed | |
| Cre01g1144 | Cre-Chr1:22586199 | Cre09g0097 | Cre-Chr9:1216869 | 5.60E-128 | transposed | |
| Cre04g2022 | Cre-Chr4:37515343 | Cre09g0097 | Cre-Chr9:1216869 | 2.90E-161 | transposed | |
| Cre05g1717 | Cre-Chr5:28874078 | Cre09g0097 | Cre-Chr9:1216869 | 2.20E-150 | transposed | |
| Cre07g1171 | Cre-Chr7:24146915 | Cre09g0097 | Cre-Chr9:1216869 | 3.50E-135 | transposed | |
| Cre08g1005 | Cre-Chr8:23153302 | Cre09g0097 | Cre-Chr9:1216869 | 2.40E-143 | transposed | |
| Cre03g1776 | Cre-Chr3:34592593 | Cre09g0097 | Cre-Chr9:1216869 | 3.10E-216 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre09g0097 | - | - | - | 0.0 |