Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0131 ATGAAAGAGACCGATATAATGGAAAAGCCCATCGCCGCCGGGCTCTCAAATTCCGGCAACCACCACCAAAAGCCCAAAAACAAAACAAAAAAGCTTCTAATTTTAGCCCTGTCTTCGACCCTGCTCCTGGTCGGCGCCGTCGTGGGGATCGTCGCCGGAGTGACGAAATCGGAAAACTCCGGGAAATCACATGCCATTGTGAAGAGCACGTGCAGCAGCACGCTTTACCCGGATCTGTGCTTTTCTGCAATTTCGAATAGTGAAGGGGCTATGTTGAAAGTTAGTAATCAAAAGGATGTGATTGAGGTGTCAATTAATATAACGGTGAAAGCTGTGGAAGATAATTACTTTAGAGTGAAGAAATTGTGTGGATTGAAGAATATTAGCCATAGAGAGAAAATTGCTCTTCATGATTGTCTTGAGACAATTGATGAGACGCTTGATGAACTTCATAAAGCTATTGTGGACCTTCATCAATACCCCAATAAAAAGTCTCTTAATCAACACGCTGATGATCTTAAAACCTTGCTTAGTTCCGCCATTACCAATCAGGAGACATGCCTCGACGGGTTTTCGCACGACGAGGCAGACAAAAACCTGCGGGATAAGCTAAAAGAAGGGCAAGAGGAAGTAGAACACATGTGCAGCAATGCATTAGCCATGATTAAGAACATGACAGATACAGACATAGCCAACTACGAGGCTAAAATGGGAACAACCAACAATAGAAAGCTCAAGGAAGAACAGAACAACGGCGACGGCATCCAGTGGCCGGAGTGGCTGTCGGCCGGAGACCGGCGGCTGCTTCAGTCGTCGTCCGTGAAGCCAGATGTGGTGGTGGCGGCGGATGGCAGTGGGAACTTCCGGACGGTGGCGGCCGCCGTGGCGGCGGCGCCGGAGAAAAGTAGCAAGAGATATGTGATAAGAATTAAAGCTGGGGTTTATAGAGAAAATGTGGAAGTGCCGAAGAAGAAAACGAATATTATGTTTATGGGAGATGGAAGACGTAACACTATAATTACCGGCAGCCGGAATGTGGTCGACGGCAGCACCACTTTTAACTCTGCAACCGTCGCTGCGGTGGGAGGAGGATTTCTAGCGCGTGACATCACATTCCAAAACACAGCCGGTCCGTCGAAGCACCAAGCGGTGGCTCTCCGTGTCGGAGCAGATCTCTCCGCCTTCTACCAATGCGACATGTTGGCTTATCAAGACACTCTCTACGTCCACTCCAACCGTCAATTCTACATCAACTGTCTCATCTCCGGCACCGTCGATTTCATCTTCGGCAACGCCGCCGCCATTTTCCAAGACTGTGACATTCACGCGCGCAAACCAAACTCAGGTCAGAAAAACATGGTCACGGCCCAAGGACGGTCCGACCCGAACCAAAACACCGGAATCGTTATCCAGAAATGCCGGATCGGTGCCACGTCGGATCTCCGACCGGTCCAGAAGAACTTCCCGACGTTCCTTGGAAGGCCGTGGAAGGAATATTCGAGAACGGTGATAATGCAGTCAACGATTAGTGACGTCATTGACCCGAAGGGATGGCATGAGTGGAGCGGTAATTTTGCACTTAACACGTTGTTTTACGGTGAGTATCAGAATACTGGACCGGGGGCTTCAACCGGGGGGAGGGTGACGTGGAAGGGATTTAGGGTAATTCGGAGTGCCACGGAGGCTGAAAGTTTTACCGCAGGTAAATTTATTGGCGGTGGGAGTTGGTTGCGCTCTACTGGCTTTCCTTTCTCTCTAGGATTATGA 1767 49.58 MKETDIMEKPIAAGLSNSGNHHQKPKNKTKKLLILALSSTLLLVGAVVGIVAGVTKSENSGKSHAIVKSTCSSTLYPDLCFSAISNSEGAMLKVSNQKDVIEVSINITVKAVEDNYFRVKKLCGLKNISHREKIALHDCLETIDETLDELHKAIVDLHQYPNKKSLNQHADDLKTLLSSAITNQETCLDGFSHDEADKNLRDKLKEGQEEVEHMCSNALAMIKNMTDTDIANYEAKMGTTNNRKLKEEQNNGDGIQWPEWLSAGDRRLLQSSSVKPDVVVAADGSGNFRTVAAAVAAAPEKSSKRYVIRIKAGVYRENVEVPKKKTNIMFMGDGRRNTIITGSRNVVDGSTTFNSATVAAVGGGFLARDITFQNTAGPSKHQAVALRVGADLSAFYQCDMLAYQDTLYVHSNRQFYINCLISGTVDFIFGNAAAIFQDCDIHARKPNSGQKNMVTAQGRSDPNQNTGIVIQKCRIGATSDLRPVQKNFPTFLGRPWKEYSRTVIMQSTISDVIDPKGWHEWSGNFALNTLFYGEYQNTGPGASTGGRVTWKGFRVIRSATEAESFTAGKFIGGGSWLRSTGFPFSLGL 588
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 1568871 1574356 - CrPI670011_09g001310.1 Cre09g0131 506799
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0131 588 ProSitePatterns Pectinesterase signature 1. 302 321 IPR018040 -
Cre09g0131 588 SUPERFAMILY Pectin lyase-like 273 587 IPR011050 -
Cre09g0131 588 Gene3D - 270 588 IPR012334 -
Cre09g0131 588 FunFam Pectinesterase 271 588 - -
Cre09g0131 588 Pfam Plant invertase/pectin methylesterase inhibitor 66 221 IPR006501 GO:0004857(InterPro)
Cre09g0131 588 Pfam Pectinesterase 277 573 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cre09g0131 588 Gene3D Invertase/pectin methylesterase inhibitor family protein 62 226 IPR035513 -
Cre09g0131 588 PANTHER PECTINESTERASE 31 579 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cre09g0131 588 SMART PMEI_2 62 221 IPR006501 GO:0004857(InterPro)
Cre09g0131 588 NCBIfam pectinesterase inhibitor domain 38 225 IPR006501 GO:0004857(InterPro)
Cre09g0131 588 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 66 226 IPR035513 -
Cre09g0131 588 MobiDBLite consensus disorder prediction 1 25 - -
Cre09g0131 588 CDD PMEI-like_3 69 226 - -
Cre09g0131 588 ProSitePatterns Pectinesterase signature 2. 421 430 IPR033131 -
Cre09g0131 588 FunFam Pectinesterase 63 226 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g0131 Cre-Chr9:1568871 Cre09g0835 Cre-Chr9:8371939 1.20E-175 dispersed
Cre04g1830 Cre-Chr4:36089652 Cre09g0131 Cre-Chr9:1568871 7.60E-124 transposed
Cre10g2082 Cre-Chr10:35497741 Cre09g0131 Cre-Chr9:1568871 2.00E-21 transposed
Cre07g1788 Cre-Chr7:33318648 Cre09g0131 Cre-Chr9:1568871 2.00E-220 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0131 K01051 - csv:101212388 1036.94