Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g0136 | ATGGATTGGAGGTGGAGGGAGCTGATATCTCTCATCATTCTCTGCATTCTAGGGTGGAAGCCTAGCTGCATTCAAGGAACCACAGATCCAACAGATGCCTCTGCTTTAAGGGTTTTGTACACCAGTTTAAACTCGCCCTCTCAGTTAACCCAGTGGAACGCAAATGGCGATGATCCTTGTGGACAATCATGGAAGGGAATTACTTGCTCCGGCTCACGGGTTACAGAAATAAACTTATCTAGCCTTGGACTCAGTGGATCGCTCGGATACCAGCTTGGAAGTATGACATCGGTAACCAACCTGGATGTGAGTAGTAACAATTTTGGAGGCGAGATTGTCTACAACCTTCCACCTAATCTAAAAAGACTAAATCTTGCACGAAACAACTTCAATAAAGGCATTCCTTATTCCGTTTCGTTGATGACTTCTCTTCAATACTTAAATATCAGTCATAATCAGCTTCAGGATCCATTGAATGATGTGTATGGGCAGCTAACTTCCCTATCCACATTGGATCTATCTTTCAATGCTATGTCAGGCAACCTGCCTCAGAGTTTTAGCTCTCTTTCTAGCATCAGCACTATGTATTTGCAAAACAATCAGTTCACTGGCACAATTGATGTCCTTGCAACTCTACCTCTTAATAACCTGAATGTTGAAAATAACCGTTTCACTGGATGGATCCCTGAACAATTGAAAAACATCAATCTGCAGACAAATGGCAACTCTTGGAACTCCGGTCCTGCACCCCCTCCTCCACCTGGTACACCCCCAGCCACCAGAAGAAACCGAAATCAACATTCAGGTGGCAGTCCATCAAATGGTGGTTCTAGTGAAGGTCAGAAATCAGGAATTAGTGGTGGTGGCATTGCAGGGATTATCATCTCCGTGCTCGTCGTTGGAGCTGTAGTAGCATTCTTCCTCGTCAAGAGGAGATCCAAGAGATCATCTACAGATATTGAAAAGCTCGACAATCAACCCCTGCAACCTCTTAAAGTGACCGCAGCACAAGAAACAAAGTCAGAAGAGACTTCCTCCACATTTTATCCAACATCATTTGACACTTCTGCTGCAATAAATCTTAAACCCCCACCTATCGATCGTCATAAATCATTTGATGAAGACGACTTCTCAAAACGAGCTGCAGTCAAGAAGGCTAGTGCTGCAGCTCCCATTAATGTAAAGTCATATTCCATAGCAGACCTTCAAATTGCTACAGGCAGCTTCAATGTTGAAAATCTTCTTGGTGAGGGATCATTTGGACGTGTATATCGGGCTGAGTTTGACGACGGGAAGGTTCTTGCCGTGAAAAAGATAAATTCATCTGCACTACCTAGGGAATTATCTGAAGATTTCACTGACATTGTTTCTAAAGTCTCCCAGTTACACCATCCCAATATAACTGAACTCGTGGGTTATTGCTTAGAGCATGGGCAGCATTTGCTTGTGTATGAGTTCCACAAAAATGGTTCGCTTTACGACTTATTACATCTATCAGATGAATACAACAAACCTCTGATATGGAACTCACGCATTAAGATTGCTTTGGGAACAGCGCGAGCATTGGAGTATCTTCATGAAGTGTGCTCACCATCTATTGTTCATAGAAACGTCAAGTCTGCTAACATATTGTTAGATGCCGAACTCAGCCCCCACCTTTCTGACTCTGGACTGGAAAGCTTTGTACCAAATGCAGATCAGGCGTTGGATGGCAGTGCAAGTTCAGGATATGCTGCCCCGGAAGTTACCATGTCCGGTCAATATACTCTGCAAAGTGACGTCTACAGTTTTGGAGTAGTCATGTTGGAACTGCTGACTGGACGCAAACCATTCGACAGTTCAAGGGCGAGGACGGAGCAATCTTTGGTTCGATGGGCAACTCCTCAGCTTCATGACATTGATGCTTTGACCAAGATGGTTGATCCCGAACTCAAAGGCCTTTACCCCGTTAAATCTCTCTCCCGATTTGCAGATGTGATTGCACTTTGCGTTCAGACGGAACCTGAGTTCAGACCTCCAATGTCGGAGGTGGTCGAAGCGTTGGTCCGTTTGGTGCAACGAGCAAACATGAGTAAGAGAACATATGGAAATGATAATGCAACATCTCCGAGAGGGGAGATGGGTGGGGAGGACACGCCATAA | 2142 | 44.63 | MDWRWRELISLIILCILGWKPSCIQGTTDPTDASALRVLYTSLNSPSQLTQWNANGDDPCGQSWKGITCSGSRVTEINLSSLGLSGSLGYQLGSMTSVTNLDVSSNNFGGEIVYNLPPNLKRLNLARNNFNKGIPYSVSLMTSLQYLNISHNQLQDPLNDVYGQLTSLSTLDLSFNAMSGNLPQSFSSLSSISTMYLQNNQFTGTIDVLATLPLNNLNVENNRFTGWIPEQLKNINLQTNGNSWNSGPAPPPPPGTPPATRRNRNQHSGGSPSNGGSSEGQKSGISGGGIAGIIISVLVVGAVVAFFLVKRRSKRSSTDIEKLDNQPLQPLKVTAAQETKSEETSSTFYPTSFDTSAAINLKPPPIDRHKSFDEDDFSKRAAVKKASAAAPINVKSYSIADLQIATGSFNVENLLGEGSFGRVYRAEFDDGKVLAVKKINSSALPRELSEDFTDIVSKVSQLHHPNITELVGYCLEHGQHLLVYEFHKNGSLYDLLHLSDEYNKPLIWNSRIKIALGTARALEYLHEVCSPSIVHRNVKSANILLDAELSPHLSDSGLESFVPNADQALDGSASSGYAAPEVTMSGQYTLQSDVYSFGVVMLELLTGRKPFDSSRARTEQSLVRWATPQLHDIDALTKMVDPELKGLYPVKSLSRFADVIALCVQTEPEFRPPMSEVVEALVRLVQRANMSKRTYGNDNATSPRGEMGGEDTP | 713 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1624505 | 1629671 | - | CrPI670011_09g001360.1 | Cre09g0136 | 506804 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g0136 | 713 | Pfam | Leucine rich repeat N-terminal domain | 30 | 70 | IPR013210 | - | |
Cre09g0136 | 713 | CDD | STKc_IRAK | 415 | 684 | - | - | |
Cre09g0136 | 713 | ProSitePatterns | Protein kinases ATP-binding region signature. | 415 | 438 | IPR017441 | GO:0005524(InterPro) | |
Cre09g0136 | 713 | Gene3D | Transferase(Phosphotransferase) domain 1 | 488 | 703 | - | - | |
Cre09g0136 | 713 | MobiDBLite | consensus disorder prediction | 238 | 284 | - | - | |
Cre09g0136 | 713 | MobiDBLite | consensus disorder prediction | 260 | 284 | - | - | |
Cre09g0136 | 713 | SUPERFAMILY | L domain-like | 28 | 234 | - | - | |
Cre09g0136 | 713 | ProSiteProfiles | Protein kinase domain profile. | 409 | 684 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g0136 | 713 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 487 | 695 | - | - | |
Cre09g0136 | 713 | Pfam | Leucine Rich repeat | 95 | 114 | IPR001611 | GO:0005515(InterPro) | |
Cre09g0136 | 713 | Pfam | Leucine Rich repeat | 142 | 156 | IPR001611 | GO:0005515(InterPro) | |
Cre09g0136 | 713 | FunFam | Protein STRUBBELIG-RECEPTOR FAMILY 8 | 373 | 486 | - | - | |
Cre09g0136 | 713 | Pfam | Protein tyrosine and serine/threonine kinase | 411 | 681 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre09g0136 | 713 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 164 | 686 | IPR046959 | - | |
Cre09g0136 | 713 | SUPERFAMILY | Protein kinase-like (PK-like) | 392 | 681 | IPR011009 | - | |
Cre09g0136 | 713 | Gene3D | Ribonuclease Inhibitor | 29 | 256 | IPR032675 | - | |
Cre09g0136 | 713 | Gene3D | Phosphorylase Kinase; domain 1 | 372 | 486 | - | - | |
Cre09g0136 | 713 | MobiDBLite | consensus disorder prediction | 693 | 713 | - | - | |
Cre09g0136 | 713 | Pfam | Leucine Rich Repeat | 167 | 189 | IPR001611 | GO:0005515(InterPro) | |
Cre09g0136 | 713 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 3 | 29 | 255 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre08g0455 | Cre-Chr8:15567662 | Cre09g0136 | Cre-Chr9:1624505 | 1.10E-135 | dispersed | |
Cre09g0136 | Cre-Chr9:1624505 | Cre10g1853 | Cre-Chr10:33120983 | 3.30E-87 | dispersed | |
Cre07g1782 | Cre-Chr7:33278222 | Cre09g0136 | Cre-Chr9:1624505 | 1.20E-203 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64378 | PF07714 | PK_Tyr_Ser-Thr | 2.50E-42 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g0136 | - | - | - | 0.0 |