Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0136 ATGGATTGGAGGTGGAGGGAGCTGATATCTCTCATCATTCTCTGCATTCTAGGGTGGAAGCCTAGCTGCATTCAAGGAACCACAGATCCAACAGATGCCTCTGCTTTAAGGGTTTTGTACACCAGTTTAAACTCGCCCTCTCAGTTAACCCAGTGGAACGCAAATGGCGATGATCCTTGTGGACAATCATGGAAGGGAATTACTTGCTCCGGCTCACGGGTTACAGAAATAAACTTATCTAGCCTTGGACTCAGTGGATCGCTCGGATACCAGCTTGGAAGTATGACATCGGTAACCAACCTGGATGTGAGTAGTAACAATTTTGGAGGCGAGATTGTCTACAACCTTCCACCTAATCTAAAAAGACTAAATCTTGCACGAAACAACTTCAATAAAGGCATTCCTTATTCCGTTTCGTTGATGACTTCTCTTCAATACTTAAATATCAGTCATAATCAGCTTCAGGATCCATTGAATGATGTGTATGGGCAGCTAACTTCCCTATCCACATTGGATCTATCTTTCAATGCTATGTCAGGCAACCTGCCTCAGAGTTTTAGCTCTCTTTCTAGCATCAGCACTATGTATTTGCAAAACAATCAGTTCACTGGCACAATTGATGTCCTTGCAACTCTACCTCTTAATAACCTGAATGTTGAAAATAACCGTTTCACTGGATGGATCCCTGAACAATTGAAAAACATCAATCTGCAGACAAATGGCAACTCTTGGAACTCCGGTCCTGCACCCCCTCCTCCACCTGGTACACCCCCAGCCACCAGAAGAAACCGAAATCAACATTCAGGTGGCAGTCCATCAAATGGTGGTTCTAGTGAAGGTCAGAAATCAGGAATTAGTGGTGGTGGCATTGCAGGGATTATCATCTCCGTGCTCGTCGTTGGAGCTGTAGTAGCATTCTTCCTCGTCAAGAGGAGATCCAAGAGATCATCTACAGATATTGAAAAGCTCGACAATCAACCCCTGCAACCTCTTAAAGTGACCGCAGCACAAGAAACAAAGTCAGAAGAGACTTCCTCCACATTTTATCCAACATCATTTGACACTTCTGCTGCAATAAATCTTAAACCCCCACCTATCGATCGTCATAAATCATTTGATGAAGACGACTTCTCAAAACGAGCTGCAGTCAAGAAGGCTAGTGCTGCAGCTCCCATTAATGTAAAGTCATATTCCATAGCAGACCTTCAAATTGCTACAGGCAGCTTCAATGTTGAAAATCTTCTTGGTGAGGGATCATTTGGACGTGTATATCGGGCTGAGTTTGACGACGGGAAGGTTCTTGCCGTGAAAAAGATAAATTCATCTGCACTACCTAGGGAATTATCTGAAGATTTCACTGACATTGTTTCTAAAGTCTCCCAGTTACACCATCCCAATATAACTGAACTCGTGGGTTATTGCTTAGAGCATGGGCAGCATTTGCTTGTGTATGAGTTCCACAAAAATGGTTCGCTTTACGACTTATTACATCTATCAGATGAATACAACAAACCTCTGATATGGAACTCACGCATTAAGATTGCTTTGGGAACAGCGCGAGCATTGGAGTATCTTCATGAAGTGTGCTCACCATCTATTGTTCATAGAAACGTCAAGTCTGCTAACATATTGTTAGATGCCGAACTCAGCCCCCACCTTTCTGACTCTGGACTGGAAAGCTTTGTACCAAATGCAGATCAGGCGTTGGATGGCAGTGCAAGTTCAGGATATGCTGCCCCGGAAGTTACCATGTCCGGTCAATATACTCTGCAAAGTGACGTCTACAGTTTTGGAGTAGTCATGTTGGAACTGCTGACTGGACGCAAACCATTCGACAGTTCAAGGGCGAGGACGGAGCAATCTTTGGTTCGATGGGCAACTCCTCAGCTTCATGACATTGATGCTTTGACCAAGATGGTTGATCCCGAACTCAAAGGCCTTTACCCCGTTAAATCTCTCTCCCGATTTGCAGATGTGATTGCACTTTGCGTTCAGACGGAACCTGAGTTCAGACCTCCAATGTCGGAGGTGGTCGAAGCGTTGGTCCGTTTGGTGCAACGAGCAAACATGAGTAAGAGAACATATGGAAATGATAATGCAACATCTCCGAGAGGGGAGATGGGTGGGGAGGACACGCCATAA 2142 44.63 MDWRWRELISLIILCILGWKPSCIQGTTDPTDASALRVLYTSLNSPSQLTQWNANGDDPCGQSWKGITCSGSRVTEINLSSLGLSGSLGYQLGSMTSVTNLDVSSNNFGGEIVYNLPPNLKRLNLARNNFNKGIPYSVSLMTSLQYLNISHNQLQDPLNDVYGQLTSLSTLDLSFNAMSGNLPQSFSSLSSISTMYLQNNQFTGTIDVLATLPLNNLNVENNRFTGWIPEQLKNINLQTNGNSWNSGPAPPPPPGTPPATRRNRNQHSGGSPSNGGSSEGQKSGISGGGIAGIIISVLVVGAVVAFFLVKRRSKRSSTDIEKLDNQPLQPLKVTAAQETKSEETSSTFYPTSFDTSAAINLKPPPIDRHKSFDEDDFSKRAAVKKASAAAPINVKSYSIADLQIATGSFNVENLLGEGSFGRVYRAEFDDGKVLAVKKINSSALPRELSEDFTDIVSKVSQLHHPNITELVGYCLEHGQHLLVYEFHKNGSLYDLLHLSDEYNKPLIWNSRIKIALGTARALEYLHEVCSPSIVHRNVKSANILLDAELSPHLSDSGLESFVPNADQALDGSASSGYAAPEVTMSGQYTLQSDVYSFGVVMLELLTGRKPFDSSRARTEQSLVRWATPQLHDIDALTKMVDPELKGLYPVKSLSRFADVIALCVQTEPEFRPPMSEVVEALVRLVQRANMSKRTYGNDNATSPRGEMGGEDTP 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1624505 1629671 - CrPI670011_09g001360.1 Cre09g0136 506804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0136 713 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Cre09g0136 713 CDD STKc_IRAK 415 684 - -
Cre09g0136 713 ProSitePatterns Protein kinases ATP-binding region signature. 415 438 IPR017441 GO:0005524(InterPro)
Cre09g0136 713 Gene3D Transferase(Phosphotransferase) domain 1 488 703 - -
Cre09g0136 713 MobiDBLite consensus disorder prediction 238 284 - -
Cre09g0136 713 MobiDBLite consensus disorder prediction 260 284 - -
Cre09g0136 713 SUPERFAMILY L domain-like 28 234 - -
Cre09g0136 713 ProSiteProfiles Protein kinase domain profile. 409 684 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g0136 713 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 487 695 - -
Cre09g0136 713 Pfam Leucine Rich repeat 95 114 IPR001611 GO:0005515(InterPro)
Cre09g0136 713 Pfam Leucine Rich repeat 142 156 IPR001611 GO:0005515(InterPro)
Cre09g0136 713 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 373 486 - -
Cre09g0136 713 Pfam Protein tyrosine and serine/threonine kinase 411 681 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre09g0136 713 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 164 686 IPR046959 -
Cre09g0136 713 SUPERFAMILY Protein kinase-like (PK-like) 392 681 IPR011009 -
Cre09g0136 713 Gene3D Ribonuclease Inhibitor 29 256 IPR032675 -
Cre09g0136 713 Gene3D Phosphorylase Kinase; domain 1 372 486 - -
Cre09g0136 713 MobiDBLite consensus disorder prediction 693 713 - -
Cre09g0136 713 Pfam Leucine Rich Repeat 167 189 IPR001611 GO:0005515(InterPro)
Cre09g0136 713 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 255 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g0455 Cre-Chr8:15567662 Cre09g0136 Cre-Chr9:1624505 1.10E-135 dispersed
Cre09g0136 Cre-Chr9:1624505 Cre10g1853 Cre-Chr10:33120983 3.30E-87 dispersed
Cre07g1782 Cre-Chr7:33278222 Cre09g0136 Cre-Chr9:1624505 1.20E-203 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64378 PF07714 PK_Tyr_Ser-Thr 2.50E-42 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0136 - - - 0.0