Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0145 ATGACGTCTCGCGGTTCCTCCGCTTCTGCTAATGGCCTATTACCGCTTACCGTTTCCACGTCCGGCCGGCATCACGATGTTGAGTCTGGGCTCTCCTCCAGCAAAAGCATTGACGAGGAGGAAGAAGAGGCTGTATCGGATCCCTTCGACATCGACAATACCAAAAATGTTCCTCTCGAGATACTCAAGCGATGGAGGCAAGCTGCATTGGTGCTTAATGCATCTCGGAGATTTCGATATACTTTGGACTTAAAAAAGGAGGAAGAGAAAGAACAAAGAAGACGGATGATTAGAGCCCATGCACAAGTCATAAGGGCAGCACTGCTTTTCAAATTGGCAGGGGAACAACAAATTGGTTCATCAGTATCACCTCCAATGTCAAGTGGTGACTATTCCATTAGTTTAGAACAGCTTGCTTCATTGACTCGTGATCAAAACTTGTCTTCTCTACAACAGTATGGAGGAGTTAAAGGCTTATCAAATTTATTGAAAACAAGTACCGAGAAAGGAATATTGGGAGATGAAACTGATCTACTCAAAAGAAGAAATGCATTTGGATCAAATACATATCCACGTAAAAAAGGACGGAGCTTCTTGAGATTTCTTTGGGAAGCTTGGCAAGATTTAACCCTAATCATCTTGATTATAGCTGCAGTGGCATCATTGGCTCTGGGGATTAAAACAGAGGGTGTAGAGGAAGGATGGTATGATGGAGGAAGTATTGCCTTTGCTGTATTTCTTGTCATAATAGTCACAGGTATTCTATCTGATTCCATTCGAAGTGCAACGGTTAGTGATTATCGACAGTCTCTTCAGTTTCAGAACTTAAATGAGGAAAAACAGAACATACAAGTAGAGATCTTGAGGGATGGTAGAACTTTAAAGGTCTCAATATTTGACCTTGTTGTTGGGGATGTTGTACCTCTTAAAATTGGAGATCAGATCCCTGCTGATGGAATATTGATCACTGGTCATTCACTTGCCATAGATGAATCTAGCATGACAGGCGAAAGCAAGATTGTTCGCAAGGATCAGAAGACACCCTTTTTGATGTCTGGTTGTAAGGTTGCAGATGGAGTTGGTACCATGATGGTAACTGCTGTTGGAATCAATACTGAATGGGGATTGTTGATGGCAAGTATCTCAGAGGATACTGGGGAAGAAACTCCCTTGCAGGTCCGTTTGAATGGAGTTGCAACTTTCATAGGCATAGTTGGGCTTGTGGTTGCAGTTTCTGTGCTAGCCGTCCTTTTGGGCAGATACTTCACTGGAAATACACATGATGCAAATGGGAACGTTGAATTTCAGCGTGGGCAAACGAGTCTAGGTGATGCTGTAGATGGAGTTATTAAAATCGTTACTGTTGCTGTTACTATTGTGGTTGTTGCAGTGCCCGAAGGACTTCCTTTGGCTGTCACCCTAACATTAGCATACTCCATGAGGAAAATGATGGCTGATAAAGCATTGGTTCGTAGGCTGTCTGCTTGCGAAACTATGGGCTCTGCAACAACAATATGTAGTGATAAGACTGGAACGTTGACTTTAAATCAGATGACTGTGGTCAAGGCATGTGTTGGAAAGAAAATGATTAATCCGCCAGATGATCCACTGCAGTTGCATTCATTGGTACTCACTCTGCTACATGAGGGCATTGCTCAGAACAGCACGGGCAATGTTTTTGTGGCTAAGGATGGTGGAGGTATAGAGGTCTCTGGATCTCCTACAGAAAAGGCTATTTTATCTTGGGCTGTAAAGCTGGGAATGAAGTTTGATGTTGCCAAATCAGAGTCCAAAATTCTCCATGTTGTCCCTTTCAATTCAGAAAAGAAGCGAGGTGGTGTTGCAATACAGCGGGCCAACTCAGAAGTTTGCATACACTGGAAAGGAGCGGCAGAGATGGTGTTATCTTCATGTACAAAGTATGTGGACTTGAATGGTGAAGTGCACTCAATAGAGGACAATGAGGATTATTTTAAGGCAGCTATTAGTGACATGGCTGCAAGTAGTCTGCGTTGTGTTGCCATTGCATATAGATCATATGAATTGGAGAAGATTCCAATAGATGAACAACGTTTGGATCAATGGGATTTGCCTGCTGATGATCTTGTTTTGCTTGCAATTGTTGGTATAAAGGATCCTTGTCGCAATGGTGTTAAAGAGGCTGTTAAAGTGTGCACAGATGCAGGTGTCAAGGTGCGCATGGTCACTGGAGACAATATACAAACTGCAAAAGCTATAGCAGTAGAGTGTGGAATACTAAACGCAACTGAAGATGCTTCCGAGCCTACAGTAATTGAAGGAAAAACATTCCGTGTATTGTCTGAGAAGGAAAGAGAACAAGTTGCCCCAAAAATAACGGTGATGGGGAGGTCTTCACCTAATGACAAGCTCTTGCTTGTTCAAGCATTAAGAAAGGGAGGGGAAGTTGTTGCTGTAACTGGAGATGGGACTAATGATGCCCCTGCACTCCATGAGGCAGATATCGGTCTTTCTATGGGCATTCAAGGTACTGAAGTTGCTAAAGAGAGTTCTGATATTGTTATCTTGGACGATAACTTTGCTTCAGTTGTAAAGGTTGTCAGGTGGGGGCGTTCTGTGTATGCAAACATTCAAAAGTTCATCCAGTTTCAGCTCACTGTAAATGTTGCCGCTCTTGTGATCAATGTTGTTGCAGCTGTGTCTTCCGGTGATGTTCCTTTAAATACCGTTCAGCTTCTTTGGGTTAACCTGATCATGGATACACTTGGTGCTCTAGCATTAGCCACTGAACCACCAACAGACCACCTGATGCATCGGTCACCTGTTGGGCGAAGGGAACCCCTTATAACGAATATTATGTGGAGGAATTTGATTGTACAGGCTTTGTATCAAGTCGCTGTACTTCTTGTCCTCAACTTCTATGCCATTGATATTCTTCAATTGAACAATGATAGCAAGGAGCATGCCTTTAATGTGAAGAATACAGTGGTTTTCAATGCATTTGTCCTCTGCCAAATATTCAATGAATTTAATGCTCGAAAACCAGATGAAATGAACGTGTTCAGTGGAGTGACGAAAAATTACCTCTTTATGGGAATAGTTGGAACAACGTTCGTGCTTCAGATTCTCATCGTCGAATTTGCTGGAAAATTTACTTCAACAGTAAAACTTGATGGGAAACAATGGGTTATATGCTTCGCTGTTGCCCTTGTGAGTTGGCCGCTGGCGGTTGTTGGCAAACTGATTCCAGTTCCGGAGACCCCATTGGCTAAATACTTCACAAAGCAAGTTCAACGGTGCAGAAGGTCACGTGGTGCTTAA 3300 42.91 MTSRGSSASANGLLPLTVSTSGRHHDVESGLSSSKSIDEEEEEAVSDPFDIDNTKNVPLEILKRWRQAALVLNASRRFRYTLDLKKEEEKEQRRRMIRAHAQVIRAALLFKLAGEQQIGSSVSPPMSSGDYSISLEQLASLTRDQNLSSLQQYGGVKGLSNLLKTSTEKGILGDETDLLKRRNAFGSNTYPRKKGRSFLRFLWEAWQDLTLIILIIAAVASLALGIKTEGVEEGWYDGGSIAFAVFLVIIVTGILSDSIRSATVSDYRQSLQFQNLNEEKQNIQVEILRDGRTLKVSIFDLVVGDVVPLKIGDQIPADGILITGHSLAIDESSMTGESKIVRKDQKTPFLMSGCKVADGVGTMMVTAVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLVVAVSVLAVLLGRYFTGNTHDANGNVEFQRGQTSLGDAVDGVIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVKACVGKKMINPPDDPLQLHSLVLTLLHEGIAQNSTGNVFVAKDGGGIEVSGSPTEKAILSWAVKLGMKFDVAKSESKILHVVPFNSEKKRGGVAIQRANSEVCIHWKGAAEMVLSSCTKYVDLNGEVHSIEDNEDYFKAAISDMAASSLRCVAIAYRSYELEKIPIDEQRLDQWDLPADDLVLLAIVGIKDPCRNGVKEAVKVCTDAGVKVRMVTGDNIQTAKAIAVECGILNATEDASEPTVIEGKTFRVLSEKEREQVAPKITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIVILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNTVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRREPLITNIMWRNLIVQALYQVAVLLVLNFYAIDILQLNNDSKEHAFNVKNTVVFNAFVLCQIFNEFNARKPDEMNVFSGVTKNYLFMGIVGTTFVLQILIVEFAGKFTSTVKLDGKQWVICFAVALVSWPLAVVGKLIPVPETPLAKYFTKQVQRCRRSRGA 1099
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1695357 1711795 - CrPI670011_09g001450.1 Cre09g0145 506813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0145 1099 Pfam Ca2+-ATPase N terminal autoinhibitory domain 47 89 IPR024750 GO:0005516(InterPro)
Cre09g0145 1099 Gene3D - 503 858 IPR023214 -
Cre09g0145 1099 Gene3D - 177 382 - -
Cre09g0145 1099 Gene3D - 59 112 - -
Cre09g0145 1099 FunFam Calcium-transporting ATPase 9 plasma membrane-type 360 530 - -
Cre09g0145 1099 FunFam Calcium-transporting ATPase 516 713 - -
Cre09g0145 1099 PRINTS P-type cation-transporting ATPase superfamily signature 728 738 - -
Cre09g0145 1099 PRINTS P-type cation-transporting ATPase superfamily signature 813 832 - -
Cre09g0145 1099 PRINTS P-type cation-transporting ATPase superfamily signature 506 520 - -
Cre09g0145 1099 PRINTS P-type cation-transporting ATPase superfamily signature 706 717 - -
Cre09g0145 1099 PRINTS P-type cation-transporting ATPase superfamily signature 330 344 - -
Cre09g0145 1099 PRINTS P-type cation-transporting ATPase superfamily signature 837 849 - -
Cre09g0145 1099 Pfam Cation transporting ATPase, C-terminus 898 1074 IPR006068 -
Cre09g0145 1099 SUPERFAMILY Calcium ATPase, transduction domain A 283 379 IPR008250 -
Cre09g0145 1099 CDD P-type_ATPase_Ca_PMCA-like 178 946 - -
Cre09g0145 1099 FunFam Calcium-transporting ATPase 57 113 - -
Cre09g0145 1099 FunFam Calcium-transporting ATPase 706 858 - -
Cre09g0145 1099 MobiDBLite consensus disorder prediction 1 49 - -
Cre09g0145 1099 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 513 710 IPR023299 GO:0000166(InterPro)
Cre09g0145 1099 PANTHER CATION TRANSPORTING ATPASE 115 1077 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Cre09g0145 1099 ProSitePatterns E1-E2 ATPases phosphorylation site. 508 514 IPR018303 -
Cre09g0145 1099 Pfam E1-E2 ATPase 282 484 - -
Cre09g0145 1099 SUPERFAMILY HAD-like 504 918 IPR036412 -
Cre09g0145 1099 SMART Cation_ATPase_N_a_2 152 226 IPR004014 -
Cre09g0145 1099 Gene3D - 204 1068 - -
Cre09g0145 1099 Pfam Cation transport ATPase (P-type) 562 641 - -
Cre09g0145 1099 SFLD p-type atpase 488 865 IPR044492 -
Cre09g0145 1099 Pfam Cation transporter/ATPase, N-terminus 153 221 IPR004014 -
Cre09g0145 1099 NCBIfam calcium-translocating P-type ATPase, PMCA-type 142 1077 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Cre09g0145 1099 FunFam Calcium-transporting ATPase 259 382 - -
Cre09g0145 1099 SFLD C1.7: P-type atpase like 488 865 - -
Cre09g0145 1099 Gene3D - 516 713 IPR023299 GO:0000166(InterPro)
Cre09g0145 1099 MobiDBLite consensus disorder prediction 1 27 - -
Cre09g0145 1099 FunFam Calcium-transporting ATPase 830 1079 - -
Cre09g0145 1099 NCBIfam HAD-IC family P-type ATPase 446 529 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cre09g0145 1099 NCBIfam HAD-IC family P-type ATPase 780 893 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cre09g0145 1099 SUPERFAMILY Calcium ATPase, transmembrane domain M 153 1077 IPR023298 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g0069 Cre-Chr9:948237 Cre09g0145 Cre-Chr9:1695357 1.00E-11 dispersed
Cre09g0145 Cre-Chr9:1695357 Cre11g1583 Cre-Chr11:25790856 0.00E+00 dispersed
Cre09g0145 Cre-Chr9:1695357 Cre09g0700 Cre-Chr9:6774237 2.40E-286 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0145 K01537 - csv:101214801 1925.98