Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g0145 | ATGACGTCTCGCGGTTCCTCCGCTTCTGCTAATGGCCTATTACCGCTTACCGTTTCCACGTCCGGCCGGCATCACGATGTTGAGTCTGGGCTCTCCTCCAGCAAAAGCATTGACGAGGAGGAAGAAGAGGCTGTATCGGATCCCTTCGACATCGACAATACCAAAAATGTTCCTCTCGAGATACTCAAGCGATGGAGGCAAGCTGCATTGGTGCTTAATGCATCTCGGAGATTTCGATATACTTTGGACTTAAAAAAGGAGGAAGAGAAAGAACAAAGAAGACGGATGATTAGAGCCCATGCACAAGTCATAAGGGCAGCACTGCTTTTCAAATTGGCAGGGGAACAACAAATTGGTTCATCAGTATCACCTCCAATGTCAAGTGGTGACTATTCCATTAGTTTAGAACAGCTTGCTTCATTGACTCGTGATCAAAACTTGTCTTCTCTACAACAGTATGGAGGAGTTAAAGGCTTATCAAATTTATTGAAAACAAGTACCGAGAAAGGAATATTGGGAGATGAAACTGATCTACTCAAAAGAAGAAATGCATTTGGATCAAATACATATCCACGTAAAAAAGGACGGAGCTTCTTGAGATTTCTTTGGGAAGCTTGGCAAGATTTAACCCTAATCATCTTGATTATAGCTGCAGTGGCATCATTGGCTCTGGGGATTAAAACAGAGGGTGTAGAGGAAGGATGGTATGATGGAGGAAGTATTGCCTTTGCTGTATTTCTTGTCATAATAGTCACAGGTATTCTATCTGATTCCATTCGAAGTGCAACGGTTAGTGATTATCGACAGTCTCTTCAGTTTCAGAACTTAAATGAGGAAAAACAGAACATACAAGTAGAGATCTTGAGGGATGGTAGAACTTTAAAGGTCTCAATATTTGACCTTGTTGTTGGGGATGTTGTACCTCTTAAAATTGGAGATCAGATCCCTGCTGATGGAATATTGATCACTGGTCATTCACTTGCCATAGATGAATCTAGCATGACAGGCGAAAGCAAGATTGTTCGCAAGGATCAGAAGACACCCTTTTTGATGTCTGGTTGTAAGGTTGCAGATGGAGTTGGTACCATGATGGTAACTGCTGTTGGAATCAATACTGAATGGGGATTGTTGATGGCAAGTATCTCAGAGGATACTGGGGAAGAAACTCCCTTGCAGGTCCGTTTGAATGGAGTTGCAACTTTCATAGGCATAGTTGGGCTTGTGGTTGCAGTTTCTGTGCTAGCCGTCCTTTTGGGCAGATACTTCACTGGAAATACACATGATGCAAATGGGAACGTTGAATTTCAGCGTGGGCAAACGAGTCTAGGTGATGCTGTAGATGGAGTTATTAAAATCGTTACTGTTGCTGTTACTATTGTGGTTGTTGCAGTGCCCGAAGGACTTCCTTTGGCTGTCACCCTAACATTAGCATACTCCATGAGGAAAATGATGGCTGATAAAGCATTGGTTCGTAGGCTGTCTGCTTGCGAAACTATGGGCTCTGCAACAACAATATGTAGTGATAAGACTGGAACGTTGACTTTAAATCAGATGACTGTGGTCAAGGCATGTGTTGGAAAGAAAATGATTAATCCGCCAGATGATCCACTGCAGTTGCATTCATTGGTACTCACTCTGCTACATGAGGGCATTGCTCAGAACAGCACGGGCAATGTTTTTGTGGCTAAGGATGGTGGAGGTATAGAGGTCTCTGGATCTCCTACAGAAAAGGCTATTTTATCTTGGGCTGTAAAGCTGGGAATGAAGTTTGATGTTGCCAAATCAGAGTCCAAAATTCTCCATGTTGTCCCTTTCAATTCAGAAAAGAAGCGAGGTGGTGTTGCAATACAGCGGGCCAACTCAGAAGTTTGCATACACTGGAAAGGAGCGGCAGAGATGGTGTTATCTTCATGTACAAAGTATGTGGACTTGAATGGTGAAGTGCACTCAATAGAGGACAATGAGGATTATTTTAAGGCAGCTATTAGTGACATGGCTGCAAGTAGTCTGCGTTGTGTTGCCATTGCATATAGATCATATGAATTGGAGAAGATTCCAATAGATGAACAACGTTTGGATCAATGGGATTTGCCTGCTGATGATCTTGTTTTGCTTGCAATTGTTGGTATAAAGGATCCTTGTCGCAATGGTGTTAAAGAGGCTGTTAAAGTGTGCACAGATGCAGGTGTCAAGGTGCGCATGGTCACTGGAGACAATATACAAACTGCAAAAGCTATAGCAGTAGAGTGTGGAATACTAAACGCAACTGAAGATGCTTCCGAGCCTACAGTAATTGAAGGAAAAACATTCCGTGTATTGTCTGAGAAGGAAAGAGAACAAGTTGCCCCAAAAATAACGGTGATGGGGAGGTCTTCACCTAATGACAAGCTCTTGCTTGTTCAAGCATTAAGAAAGGGAGGGGAAGTTGTTGCTGTAACTGGAGATGGGACTAATGATGCCCCTGCACTCCATGAGGCAGATATCGGTCTTTCTATGGGCATTCAAGGTACTGAAGTTGCTAAAGAGAGTTCTGATATTGTTATCTTGGACGATAACTTTGCTTCAGTTGTAAAGGTTGTCAGGTGGGGGCGTTCTGTGTATGCAAACATTCAAAAGTTCATCCAGTTTCAGCTCACTGTAAATGTTGCCGCTCTTGTGATCAATGTTGTTGCAGCTGTGTCTTCCGGTGATGTTCCTTTAAATACCGTTCAGCTTCTTTGGGTTAACCTGATCATGGATACACTTGGTGCTCTAGCATTAGCCACTGAACCACCAACAGACCACCTGATGCATCGGTCACCTGTTGGGCGAAGGGAACCCCTTATAACGAATATTATGTGGAGGAATTTGATTGTACAGGCTTTGTATCAAGTCGCTGTACTTCTTGTCCTCAACTTCTATGCCATTGATATTCTTCAATTGAACAATGATAGCAAGGAGCATGCCTTTAATGTGAAGAATACAGTGGTTTTCAATGCATTTGTCCTCTGCCAAATATTCAATGAATTTAATGCTCGAAAACCAGATGAAATGAACGTGTTCAGTGGAGTGACGAAAAATTACCTCTTTATGGGAATAGTTGGAACAACGTTCGTGCTTCAGATTCTCATCGTCGAATTTGCTGGAAAATTTACTTCAACAGTAAAACTTGATGGGAAACAATGGGTTATATGCTTCGCTGTTGCCCTTGTGAGTTGGCCGCTGGCGGTTGTTGGCAAACTGATTCCAGTTCCGGAGACCCCATTGGCTAAATACTTCACAAAGCAAGTTCAACGGTGCAGAAGGTCACGTGGTGCTTAA | 3300 | 42.91 | MTSRGSSASANGLLPLTVSTSGRHHDVESGLSSSKSIDEEEEEAVSDPFDIDNTKNVPLEILKRWRQAALVLNASRRFRYTLDLKKEEEKEQRRRMIRAHAQVIRAALLFKLAGEQQIGSSVSPPMSSGDYSISLEQLASLTRDQNLSSLQQYGGVKGLSNLLKTSTEKGILGDETDLLKRRNAFGSNTYPRKKGRSFLRFLWEAWQDLTLIILIIAAVASLALGIKTEGVEEGWYDGGSIAFAVFLVIIVTGILSDSIRSATVSDYRQSLQFQNLNEEKQNIQVEILRDGRTLKVSIFDLVVGDVVPLKIGDQIPADGILITGHSLAIDESSMTGESKIVRKDQKTPFLMSGCKVADGVGTMMVTAVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLVVAVSVLAVLLGRYFTGNTHDANGNVEFQRGQTSLGDAVDGVIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVKACVGKKMINPPDDPLQLHSLVLTLLHEGIAQNSTGNVFVAKDGGGIEVSGSPTEKAILSWAVKLGMKFDVAKSESKILHVVPFNSEKKRGGVAIQRANSEVCIHWKGAAEMVLSSCTKYVDLNGEVHSIEDNEDYFKAAISDMAASSLRCVAIAYRSYELEKIPIDEQRLDQWDLPADDLVLLAIVGIKDPCRNGVKEAVKVCTDAGVKVRMVTGDNIQTAKAIAVECGILNATEDASEPTVIEGKTFRVLSEKEREQVAPKITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIVILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNTVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRREPLITNIMWRNLIVQALYQVAVLLVLNFYAIDILQLNNDSKEHAFNVKNTVVFNAFVLCQIFNEFNARKPDEMNVFSGVTKNYLFMGIVGTTFVLQILIVEFAGKFTSTVKLDGKQWVICFAVALVSWPLAVVGKLIPVPETPLAKYFTKQVQRCRRSRGA | 1099 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1695357 | 1711795 | - | CrPI670011_09g001450.1 | Cre09g0145 | 506813 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g0145 | 1099 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 47 | 89 | IPR024750 | GO:0005516(InterPro) | |
Cre09g0145 | 1099 | Gene3D | - | 503 | 858 | IPR023214 | - | |
Cre09g0145 | 1099 | Gene3D | - | 177 | 382 | - | - | |
Cre09g0145 | 1099 | Gene3D | - | 59 | 112 | - | - | |
Cre09g0145 | 1099 | FunFam | Calcium-transporting ATPase 9 plasma membrane-type | 360 | 530 | - | - | |
Cre09g0145 | 1099 | FunFam | Calcium-transporting ATPase | 516 | 713 | - | - | |
Cre09g0145 | 1099 | PRINTS | P-type cation-transporting ATPase superfamily signature | 728 | 738 | - | - | |
Cre09g0145 | 1099 | PRINTS | P-type cation-transporting ATPase superfamily signature | 813 | 832 | - | - | |
Cre09g0145 | 1099 | PRINTS | P-type cation-transporting ATPase superfamily signature | 506 | 520 | - | - | |
Cre09g0145 | 1099 | PRINTS | P-type cation-transporting ATPase superfamily signature | 706 | 717 | - | - | |
Cre09g0145 | 1099 | PRINTS | P-type cation-transporting ATPase superfamily signature | 330 | 344 | - | - | |
Cre09g0145 | 1099 | PRINTS | P-type cation-transporting ATPase superfamily signature | 837 | 849 | - | - | |
Cre09g0145 | 1099 | Pfam | Cation transporting ATPase, C-terminus | 898 | 1074 | IPR006068 | - | |
Cre09g0145 | 1099 | SUPERFAMILY | Calcium ATPase, transduction domain A | 283 | 379 | IPR008250 | - | |
Cre09g0145 | 1099 | CDD | P-type_ATPase_Ca_PMCA-like | 178 | 946 | - | - | |
Cre09g0145 | 1099 | FunFam | Calcium-transporting ATPase | 57 | 113 | - | - | |
Cre09g0145 | 1099 | FunFam | Calcium-transporting ATPase | 706 | 858 | - | - | |
Cre09g0145 | 1099 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
Cre09g0145 | 1099 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 513 | 710 | IPR023299 | GO:0000166(InterPro) | |
Cre09g0145 | 1099 | PANTHER | CATION TRANSPORTING ATPASE | 115 | 1077 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) | |
Cre09g0145 | 1099 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 508 | 514 | IPR018303 | - | |
Cre09g0145 | 1099 | Pfam | E1-E2 ATPase | 282 | 484 | - | - | |
Cre09g0145 | 1099 | SUPERFAMILY | HAD-like | 504 | 918 | IPR036412 | - | |
Cre09g0145 | 1099 | SMART | Cation_ATPase_N_a_2 | 152 | 226 | IPR004014 | - | |
Cre09g0145 | 1099 | Gene3D | - | 204 | 1068 | - | - | |
Cre09g0145 | 1099 | Pfam | Cation transport ATPase (P-type) | 562 | 641 | - | - | |
Cre09g0145 | 1099 | SFLD | p-type atpase | 488 | 865 | IPR044492 | - | |
Cre09g0145 | 1099 | Pfam | Cation transporter/ATPase, N-terminus | 153 | 221 | IPR004014 | - | |
Cre09g0145 | 1099 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 142 | 1077 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
Cre09g0145 | 1099 | FunFam | Calcium-transporting ATPase | 259 | 382 | - | - | |
Cre09g0145 | 1099 | SFLD | C1.7: P-type atpase like | 488 | 865 | - | - | |
Cre09g0145 | 1099 | Gene3D | - | 516 | 713 | IPR023299 | GO:0000166(InterPro) | |
Cre09g0145 | 1099 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Cre09g0145 | 1099 | FunFam | Calcium-transporting ATPase | 830 | 1079 | - | - | |
Cre09g0145 | 1099 | NCBIfam | HAD-IC family P-type ATPase | 446 | 529 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cre09g0145 | 1099 | NCBIfam | HAD-IC family P-type ATPase | 780 | 893 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cre09g0145 | 1099 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 153 | 1077 | IPR023298 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre09g0069 | Cre-Chr9:948237 | Cre09g0145 | Cre-Chr9:1695357 | 1.00E-11 | dispersed | |
Cre09g0145 | Cre-Chr9:1695357 | Cre11g1583 | Cre-Chr11:25790856 | 0.00E+00 | dispersed | |
Cre09g0145 | Cre-Chr9:1695357 | Cre09g0700 | Cre-Chr9:6774237 | 2.40E-286 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g0145 | K01537 | - | csv:101214801 | 1925.98 |