Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0198 ATGGGTCCATGGCCACGAGGCAGTCTGCTACTGCTCCTCCGAAAGTTGGCGTTGGCCATTCTCGTCTTCATCCTTCTCTCTTCTCTCTTCTCTCTTCTCTCTCTTAAAAACCAACAACATCTGTGCCTTCTGTTTCGGCCACTTTTCCACACAAAAAAGAATTTGTATGTATACGAATATTCACAACCTGGGTTTTCGTATATTCCATTCAAATCACTGTACAAATCCCTCCATGTAACACCCAGAAAGGCACATGGGATTTCATCTGTTTTGGCAACAAATCTCAATCAAATACTATGGCGACATGAGCACAAACAACAGATAAACAAGCCAAAAAGGAAGAACTGGGTTTTCATATCATCAACAGCAACAGAATTTCTTGCAAGCAGTTGGGGTAGAGAATTTGTCGCTGGTGGATTTGGTGGCATCGCCGGCATAATCTCCGGCTACCCACTTGATACTCTTCGAGTAAGGCAACAGCAATCCATTTCTGGTTCTGCTTTGAAAATCTTTCGCAATATCATTGCCAACGATGGCGTTGCTGGTCTTTACAGAGGCATGGCTGCTCCTTTGGCCTCTGTCACTTTCCAGAACGCCGCCGTGTTTCAGATCTACGCCGTTCTTTCTCGGGCATTCAACTCCTCCTCCCAATCCAATGGTGACCCTCCAAGCTATAAGGCCGTGGCCTTTGGAGGATTTGGCACCGGAGCTCTTCAGAGCTTCATCTTGTCGCCGGTGGAGCTTGTGAAGATCCGCCTGCAATTGCAGAGTTCAAGCCATGCAGCAGCATCACACCAACAATTAATTTCTTCTTCTTCCCATAGAGGTCCATTGAGCGTCGCCAAAAGCATCTGCAAAACAGAAGGATTGAGAGGAATTTACAGAGGACTTACCATAACCATGCTGAGAGATGCACCTGCACACGGCATCTATTTCTGGACATATGAGTGCATGAGAGAGCAGTTTCATCCTGGCTGCCGGAAGACCGGCCAAGAGAGCGTCGGCACAATGCTGGTCGCCGGAGGGCTTGCCGGAGTTGCCAGCTGGGTTTTTTGTTATCCCTTGGATGTATTGAAGACTAGAATTCAGGGTCAGACACAAAGTTCATCTCGAAAGTACAATGGAATTGTGGATTGTCTTAGCAAAAGTGTGAGAGAAGAGGGTTACAGAGTGCTATGGCGAGGGCTCGGGACAGCAGTTGCCAGAGCATTTGTGGTAAATGGGGCCATTTTTGCTGCTTATGAGATAACACTGAGGTGTTTGTTTAGCAATGGAAGCAATCAGACACAACAATAA 1296 46.91 MGPWPRGSLLLLLRKLALAILVFILLSSLFSLLSLKNQQHLCLLFRPLFHTKKNLYVYEYSQPGFSYIPFKSLYKSLHVTPRKAHGISSVLATNLNQILWRHEHKQQINKPKRKNWVFISSTATEFLASSWGREFVAGGFGGIAGIISGYPLDTLRVRQQQSISGSALKIFRNIIANDGVAGLYRGMAAPLASVTFQNAAVFQIYAVLSRAFNSSSQSNGDPPSYKAVAFGGFGTGALQSFILSPVELVKIRLQLQSSSHAAASHQQLISSSSHRGPLSVAKSICKTEGLRGIYRGLTITMLRDAPAHGIYFWTYECMREQFHPGCRKTGQESVGTMLVAGGLAGVASWVFCYPLDVLKTRIQGQTQSSSRKYNGIVDCLSKSVREEGYRVLWRGLGTAVARAFVVNGAIFAAYEITLRCLFSNGSNQTQQ 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2130707 2132369 - CrPI670011_09g001980.1 Cre09g0198 506866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0198 431 Pfam Mitochondrial carrier protein 229 322 IPR018108 -
Cre09g0198 431 Pfam Mitochondrial carrier protein 332 422 IPR018108 -
Cre09g0198 431 Pfam Mitochondrial carrier protein 130 214 IPR018108 -
Cre09g0198 431 Gene3D Mitochondrial carrier domain 69 222 IPR023395 -
Cre09g0198 431 Gene3D Mitochondrial carrier domain 224 430 IPR023395 -
Cre09g0198 431 SUPERFAMILY Mitochondrial carrier 131 415 IPR023395 -
Cre09g0198 431 PRINTS Mitochondrial carrier protein signature 134 147 IPR002067 GO:0055085(InterPro)
Cre09g0198 431 PRINTS Mitochondrial carrier protein signature 238 256 IPR002067 GO:0055085(InterPro)
Cre09g0198 431 PRINTS Mitochondrial carrier protein signature 294 312 IPR002067 GO:0055085(InterPro)
Cre09g0198 431 PRINTS Mitochondrial carrier protein signature 341 363 IPR002067 GO:0055085(InterPro)
Cre09g0198 431 ProSiteProfiles Solute carrier (Solcar) repeat profile. 332 420 IPR018108 -
Cre09g0198 431 ProSiteProfiles Solute carrier (Solcar) repeat profile. 223 321 IPR018108 -
Cre09g0198 431 ProSiteProfiles Solute carrier (Solcar) repeat profile. 132 211 IPR018108 -
Cre09g0198 431 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 128 421 IPR050567 GO:0006810(PANTHER)|GO:0022857(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g0198 Cre-Chr9:2130707 Cre10g2331 Cre-Chr10:37520876 7.20E-21 dispersed
Cre07g1665 Cre-Chr7:32135800 Cre09g0198 Cre-Chr9:2130707 1.00E-122 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0198 K15109 - csv:101222165 537.339