Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0257 ATGTATGGAAGAAAAGCATGCCAGTTGGTGAAAGAGCTAGCAAGCGGTGAGAAAGGACAGCTAACACAGTTCAATAGCGACCTATTTGAACAGGTTATTTCAGAATGCCAGCAGCATCATCTTGAGCTTCAGTCCTTAATTAGGAAAGTACAGGAAGAAGGATTCGATCTTCAGACAACTAAGAATGAAGATCATTTTGGTGCGCTCATTCACCACCTTGCATTAGTTCGCAATAAACGCTGCCTTATGGCTTATGTGTATAATCGAGCTGAGATTATAAGAAGTTTGATATGGAAGGTAGTAGGATCTATGATTCCACCGGAAATACAAGAGAAGCTCAGCAACTCAGAGGAAGAGTATTTCAAGAAGCATTCTGCACGTCTGAAAGAATATATGTCAAAACTGGAGTTGGATTTGACAGTGGATATGGTGCCACCTAAGGATCCTTATATCCAAGTGAGGGTGCTTGATGATATCGGTGAAGGAATCGTATTGAGTGATGATAAAACAGCAAATTTTGCGCTTCATTCCATACATTTTCTTAAACGAACAGACGCTGAACAATACATCTCACGGTTGTTAGCAAGCGATGTGTTTCCTGCATCTGTTGTGAAAGCAATTCTATATCCTGGAGCCATTGCAAAAGCCATCTTTAACAACAAACCTATTCCATCCTTTAATAACTTGCCAAAGCTATACAAGTTTATCCATGTTAAACCAACAGCTTTTCCTCTCACCTCAGATCTCCATCGCCTAGAGGTTATTGCAGGAAGTTATTTGGCAGTAGGAGGAGGTGTCATGGGAATGGTTAAAGCGGGGAGTGGGAGAATGAGTCTATTTGGTTGCCTTATCGCAATGTGGGGAATTGTTTGGAGGAAATCTTCAAATTTAAATCCCAATAAGGAAATTGGCCAAATCTATCCGACCATGTTTCTTGCTCTGCTTTTGGCTTTCTTGTCCGTTAGGAAGGATGTGCGGAGAATAGTACGTACCCTCAAACCTCAATCCAACCCTTTTTCTTCATGGAACAAACACAAGCACAAATGA 1047 41.07 MYGRKACQLVKELASGEKGQLTQFNSDLFEQVISECQQHHLELQSLIRKVQEEGFDLQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRAEIIRSLIWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRLLASDVFPASVVKAILYPGAIAKAIFNNKPIPSFNNLPKLYKFIHVKPTAFPLTSDLHRLEVIAGSYLAVGGGVMGMVKAGSGRMSLFGCLIAMWGIVWRKSSNLNPNKEIGQIYPTMFLALLLAFLSVRKDVRRIVRTLKPQSNPFSSWNKHKHK 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2635375 2640939 - CrPI670011_09g002570.1 Cre09g0257 506925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0257 348 CDD GINS_B_Psf1 149 190 - -
Cre09g0257 348 Pfam GINS complex protein helical bundle domain 63 135 IPR021151 -
Cre09g0257 348 SUPERFAMILY GINS helical bundle-like 1 147 IPR036224 -
Cre09g0257 348 Gene3D - 1 135 - -
Cre09g0257 348 CDD GINS_A_psf1 3 137 IPR005339 GO:0000811(InterPro)|GO:0006260(InterPro)
Cre09g0257 348 PANTHER PARTNER OF SLD5 1 192 IPR005339 GO:0000811(PANTHER)|GO:0000811(InterPro)|GO:0006260(InterPro)|GO:1902983(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g1266 Cre-Chr8:25836806 Cre09g0257 Cre-Chr9:2635375 9.20E-30 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0257 K10732 - csv:101205409 378.637