Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g0311 | ATGCCGGTTGACGGTTCTTCAACTGCCGCCTCCACCGTATGCGTCACCGGCGCCGGCGGCTTCATTGCCTCATGGATCGTCAAACTCCTCCTCCAGAAAGGCTATATCGTAAGAGGAACCGTCAGAAATCCAGAGGATCCGAAGAACCGCCATTTGAGAGAACTCGAAGGTGCGGCGGAGCGGCTCAGTTTGCATAAAGCGGATCTTCTCGATTTCGAAAGCCTCCGAGCGGCGATCGACGGCTGCGATGGCGTTTTCCACACTGCGTCGCCTGTGACTGACGATCCGGAGCAAATGGTGGAACCGGCGGTTAACGGAACGAAGAACGTCATAATCGCGGCGGCCGAAGCCAATGTCCGTCGCGTGGTGTTCACTTCCTCGATTGGTGCAGTCTACATGGACCCCAACCGTGGTCCAGACGACATCGTCGACGAGTCCTGTTGGAGCGATCTCGAGTTCTGTAAGAACACAAAGAATTGGTATTGCTATGGAAAAGCTGTGGCGGAGCAAGCCGCATGGGAGGTTGCGAAGGAGAAGGGGGTGGATTTGGTGGTGGTGAATCCAGTGCTGGTGCTAGGGCCATTGTTGCAATCCACCATTAATGCGAGCATAATTCATATACTGAAGTACTTGACTGGATCAGCTAAGACGTATGCCAATTCCGTTCAGGCATATGTACACGTGAAGGATGTGGCTCTAGCTCATATCCTTGTGTACGAGACTCCCTCCGCCGCCGGCCGGTACCTCTGCGCCGAGAGTGTGCTTCACAGAGGGGAGGTTGTTGAGATTCTGGCCAAATTGTTCCCGGAATATCCTGTTCCTACCAAGTGCTCAGATGAAGTGAACCCAAGGAAGAAGGCATACAACTTCTCCAACAAGAAGTTGAAGGACTTGGGATTGGAGTTCACTCCAGCGAAGCAGTGTTTATACGACACCGTTAAGAGCCTACAAGAGAAAGGTCATCTCCCAATTCCCACTTCTACTCAACCAGTTGACTCCATTCGAATTCAATCTTGA | 1017 | 52.51 | MPVDGSSTAASTVCVTGAGGFIASWIVKLLLQKGYIVRGTVRNPEDPKNRHLRELEGAAERLSLHKADLLDFESLRAAIDGCDGVFHTASPVTDDPEQMVEPAVNGTKNVIIAAAEANVRRVVFTSSIGAVYMDPNRGPDDIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKGVDLVVVNPVLVLGPLLQSTINASIIHILKYLTGSAKTYANSVQAYVHVKDVALAHILVYETPSAAGRYLCAESVLHRGEVVEILAKLFPEYPVPTKCSDEVNPRKKAYNFSNKKLKDLGLEFTPAKQCLYDTVKSLQEKGHLPIPTSTQPVDSIRIQS | 338 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 3032537 | 3038372 | + | CrPI670011_09g003110.1 | Cre09g0311 | 506979 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g0311 | 338 | CDD | FR_SDR_e | 13 | 300 | - | - | |
Cre09g0311 | 338 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 11 | 317 | IPR036291 | - | |
Cre09g0311 | 338 | Pfam | NAD dependent epimerase/dehydratase family | 13 | 245 | IPR001509 | - | |
Cre09g0311 | 338 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 12 | 315 | IPR050425 | GO:0016616(PANTHER) | |
Cre09g0311 | 338 | FunFam | Cinnamoyl-CoA reductase 1 | 4 | 335 | - | - | |
Cre09g0311 | 338 | Gene3D | - | 4 | 337 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g2608 | Cre-Chr2:39348056 | Cre09g0311 | Cre-Chr9:3032537 | 1.70E-86 | dispersed | |
Cre02g2614 | Cre-Chr2:39405320 | Cre09g0311 | Cre-Chr9:3032537 | 5.70E-79 | dispersed | |
Cre09g0311 | Cre-Chr9:3032537 | Cre10g1448 | Cre-Chr10:28289633 | 4.60E-148 | dispersed | |
Cre02g1368 | Cre-Chr2:21935937 | Cre09g0311 | Cre-Chr9:3032537 | 5.80E-63 | transposed | |
Cre03g0353 | Cre-Chr3:1935417 | Cre09g0311 | Cre-Chr9:3032537 | 4.40E-79 | transposed | |
Cre05g2449 | Cre-Chr5:35891688 | Cre09g0311 | Cre-Chr9:3032537 | 3.90E-62 | transposed | |
Cre10g0943 | Cre-Chr10:12599316 | Cre09g0311 | Cre-Chr9:3032537 | 6.80E-64 | transposed | |
Cre10g1447 | Cre-Chr10:28280608 | Cre09g0311 | Cre-Chr9:3032537 | 1.10E-123 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g0311 | K09753 | - | csv:101213412 | 635.18 |