Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0341 ATGAAACGACATCGTACCCCACCACGGCGGGTGGTGGGTGGGTGCGTGGCGGTGGACTGTGGACTGTGGAGGGGGAAGCTCCATCTAAAGCCAAAGACTGTTTCTTTGTGGGTTCCCACACTTGGGACTCCGGTGAATATCATCGTCGGATCACATGTTTGGGTTGAGGATCCTGAGGATGCTTGGATTGAAGGGCAAGTTACAGAAATTAATGGCAAAAATGCTACTATACTCACTACCAATGAAAAAACTATTGTTGCAGAAATTTCGAGTATATATCCGAAAGACACGGAGGCGCCGCCGGCGGGGGTTGACGACATGACGAAATTGGCGTATCTTCATGAACCGGGAGTTCTGCATAACCTAGCTTGTCGATTTTCTCTCAATGAAATATACACATACACCGGGAATATTCTAATTGCGGTGAATCCTTTCCGGCGACTGCCCCATTTGTATGATATTCACATGATGGAACAATATAAAGGAGCTCCTTTCGGCGAACTTAGTCCACATCTTTTCGCTGTTGCAGATGCTTGCTATAGATCGATGATTAACGAGCAAGGAAGTCAGTCCATATTAGTGAGTGGAGAGAGTGGTGCTGGTAAAACTGAGACAACAAAGATGCTCATGAGATATCTTGCATTCATGGGAGGCAGGTCAGATACTGAAGGAAGAACAGTTGAACAACAGGTTTTGGAGGTGAGTAGCATTCGTTTTGGTAAATTTGTAGAAATACAATTTGATAAGAATTGGAAGATCTCTGGGGCTGCCATTCGTACATACCTTCTCGAGCGGTCACGTGTTTGCCAAGTCTCAGACCCTGAGAGAAACTACCATTGTTTTTACATGCTCTGTGCAGCACCACCAGAAGATGTCAAGAAATTCAAGTTAGGAGACCCGAGGACATTTCATTATCTTAATCAAACAAATTGTTATGAAGTGGCGAATGTCGATGATGCAAGAGAGTACTTAGAGACGAGAAATGCCATGGATGTTGTCGGAATCAGCCAGGAGGAACAGGATGCTATATTTCGTGTTGTGGCTTCAATACTGCATCTTGGAAACATCAACTTCATGAAAGGGAAGGAAGTTGACTCTTCCAAAGTGAAAGACGAGAAGTCTAATTATCATCTTCAAACAGCAGCAGAGCTACTCATGTGTGATGTGAAGGCACTGGAACATTCGCTCTGCCAGCGTGTCATAGTGACTCCAGATGGCAACATTACAAAGCCTTTGGACCCAGATTCAGCAGCCTTGAGTCGTGATGCATTGGCAAAAACTGTGTATTCTAGGCTGTTTGATTGGATTGTGGACAAAATTAATAGTTCAATTGGCCAAGATCCTAATGCAGCCAGCTTAATTGGAGTTCTTGATATTTATGGTTTTGAAAGCTTCAAGATCAACAGTTTTGAGCAGCTCTGTATCAACCTGACCAATGAGAAGTTGCAGCAACATTTTAATCAGCATGTTTTCAAGATGGAGCAAGAGGAGTATACGAAGGAAGAAATAAACTGGAGCTATGTTGAGTTTGTAGATAATCAGGATGTCCTTGATCTTATTGAGAAGAAACCTGGAGGTATAATCGCCCTGCTCGATGAAGCCTGTATGTTTCCAAAGTCAACACACGAAACATTTGCTCAAAAGATGTATCAGACGTACAAAGGACATAAGCGGTTCAGCAAGCCAAAACTTGCTCGAACAGACTTCACAATAAACCATTATGCTGGAGATGTTACATACCAAGCAGATCAATTTCTTGATAAAAACAAGGACTATGTAGTAGCAGAACATCAGGCTCTTCTAAATGCCTCACGATGCTCTTTTGTTGCTAATCTTTTCCCTCCACTTCCTGAGGAGAGCTCAAAGCAATCCAAGTTTTCCTCTATTGGTACTCGGTTCAAGCAACAACTACAAGCTCTCATGGAAACATTGAATACTACAGAACCACATTATATTAGATGTGTAAAGCCCAACACAGTTTTGAAACCTGGCATCTTTGAGAACTTCAACGTGTTGAACCAATTGAGGTGTGGGGGAGTGCTCGAGGCAATTAGGATAAGTTGTGCAGGATATCCAACAAAAAGAACATTTGACGAGTTCCTTGATCGTTTTGGAATGCTTGCTCCAGATATTTCGGATGGCTCTGATGAAAAATCAGCATGCATTGCAATATGTGACAGAATGGGCTTAAAAGGTTATCAGATTGGAAAAACAAAAGTGTTCCTCAGAGCTGGACAAATGGCTGAGTTGGATGCACGACGAACTGAAATTTTGGCTAATGCTGTCAGACGCATCCAGCGGCAAATACGAACCCATCTAACTAGGAAAGAGTTTATCGCCCTGAGGAGAGCTACAATTCATATACAGAAACTTTGGAGAGGGCAACTTGCTCGTAAGCTGTATGAGCAAATGAGGAGAGAAGCAGCTTCAATCCGTATACAGAAGCATGCACGTGCTCACGCAGATAGAAAATCTTACAAAAAATTACTTGCATCAGCTATAGTTATTCAAACTGGTATGCGTGCAATGGCAGCTAGAAATGAGTACAGACACAGAAGAAGAACTAAGGCAGCTATCATTGTTCAGACTGAATGGCGGAGGGCATCAGCTATTTCAGCTTACAAACAGCAGCAGAAGGCAACTCTTGCCCTTCAATGCCTCTGGCGATCTAAAGTTGCAAGGAAGGAGCTTAGAAAATTAAAGATGGCTGCAAGAGAAACAGGAGCACTCAAGGAGGCCAAGGACAAATTGGAGAAACGTGTCGAGGAGCTAACATGGCGCCTAGAGTTTGAGAAGCACTTGAGGATGGATGTTGAAGAAGCTAAGGGGCAAGAGGTTGCAAAATTACAAAATGCTTTGGAAGAAATGCAAGGCCAGCTGGATGAAGCCAATGCTGCAATTATACGTGAGAGAGAAGCAGCAAAATTGGCCATAGAACAAGCTCCACCAGTCATTAAGGAAGTACCTGTGGTTGACGAGACCAAGCTAGAAATGCTGAGAAATCATAATGAAGAACTTGAGGGGGAGGTTGGAGAGCTGAAGAAGAAAATTGAGGAATTTGAAGAAAAGTATGCTGAAGTGGAAAAGGAGAGTAAAGCTAGGCTCAAGGAGGCAGAAGAGGCACATTTGAAATCGTTGCAACTTCAAGAGGCTATTGAGAGATTGGAATCAAATTTATCTAGCCTTGAGTCTGAGAACCAGGTTCTGCGCCAGCAGGCTTTGGTTGCAGCAGACAATGAGTCCCTCTCTGAAGAAGTGCAAGCCCTCAAGAGTAAGATTGGAAGTCTAGAGGCAGAGAATGAAGTTCTCCGCAACCGGCCAGTGGCTGTTGAGCATATATCTGTTCCCGCTGGAGCGCTTACAGAAAGCAAGACTTTAGATAACGGACATGTTAAGGAAGAAGAGATTAAATCAACTAAGGAACCATCTACTGTTCCCATCCTAGTTAAACAAGGTTCGCTTACAGAAAAGCAACAGGAAAATCATGATGTCCTGCTCAAGTGCTTAGCAGAAGACAAGCGTTTTGACAAGGGCAGACCAGTTGCAGCCTGTATTGTCTACAAGACACTTCTTCAATGGAGATCTTTTGAAGCAGAGAAAACAAATATATTTGACAGAATTATTCACACAATCAGATCTTCTATAGAGAGTCAAGAAAATATCAGTGATTTTGCATATTGGCTTTCAACCACTTCCACCCTTCTCTATCTTCTTCAAAGTTCACTCAAGGCAACCAATACAAGTACTGTAGCTTCACATCGCAACCGAGCTTCTCCTGCAACTTTATTTGGTCGTATGGCATATGGTCTTCGATCATCTTCAGTGGGTATGGGAATTTCCAGTGGATACAGTGGAATGGTGGGCAAGACAAACAATCAGTCTAAAGTTGAAGCCAAGTACCCAGCACTTCTTTTTAAGCAACATCTGGCAGCATGCATTGAAAAATTGTTTGGGATGATACGTGATAATTTGAAGAAAGAAATTAGTCCTTTCTTGCATCTATGTATTCAGGCACCAAGATCTGTGAAGTCCAGATCAATAAGAGGGTCATCTAAAAATATCCATTCAAACATTGTTGCAAAACAGCAAGCATCAAGTATTCACTGGCAAAGCATTGTTAATAAGCTAGACCAAACGTTGGATATAATGTCTGAAAACCATGTTCCCTCCATGATCATGAGAAAAATCTTCTTCCAAGTTTTCTCATTCATAAATGTCCAGCTTTTCAATAGCTTGTTACTACGACGTGAGTGTTGTTCCTTCAGTAATGGAGAGTACTTGAAGTTGGGTCTGCAGGAGTTGGAGCAATGGTGTAACAAAGCTACCGATACGTATGCTGGCTCTTCTTGGGATGAACTTCAACACATAAGACAAGCAGTAGGATTTCTGGTGTTACTCCAGAAATCCCAGAAAAGTTTGAATGAGATCACAGATGAATTGTGCCCGATTCTGAGCATTCCGCAAATATATCGCATAGGCACGATGTTCTGGGATGACAAATATGGAACTCAGGGATTATCTCCTGATATAATTGGAAAAATGAGAGTCCTATTGGCAGAAGACTCCATAAACATCCCAAACAACTCTTTCCTGCTTGATGTGGATTCAAGCATACCATTTTCAATGGAAGAAATATTCCGGTCCTTTGGCGAGGATGGCGGGGTTAACCTTTCCGACGTTGACCCGCCACCACTTATAAGACAAAGATCGGATTTCCATTTTCTAGTGCAGCAACTGACTGAATGA 4746 42.58 MKRHRTPPRRVVGGCVAVDCGLWRGKLHLKPKTVSLWVPTLGTPVNIIVGSHVWVEDPEDAWIEGQVTEINGKNATILTTNEKTIVAEISSIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLACRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGAPFGELSPHLFAVADACYRSMINEQGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSDTEGRTVEQQVLEVSSIRFGKFVEIQFDKNWKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKKFKLGDPRTFHYLNQTNCYEVANVDDAREYLETRNAMDVVGISQEEQDAIFRVVASILHLGNINFMKGKEVDSSKVKDEKSNYHLQTAAELLMCDVKALEHSLCQRVIVTPDGNITKPLDPDSAALSRDALAKTVYSRLFDWIVDKINSSIGQDPNAASLIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFSKPKLARTDFTINHYAGDVTYQADQFLDKNKDYVVAEHQALLNASRCSFVANLFPPLPEESSKQSKFSSIGTRFKQQLQALMETLNTTEPHYIRCVKPNTVLKPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFDEFLDRFGMLAPDISDGSDEKSACIAICDRMGLKGYQIGKTKVFLRAGQMAELDARRTEILANAVRRIQRQIRTHLTRKEFIALRRATIHIQKLWRGQLARKLYEQMRREAASIRIQKHARAHADRKSYKKLLASAIVIQTGMRAMAARNEYRHRRRTKAAIIVQTEWRRASAISAYKQQQKATLALQCLWRSKVARKELRKLKMAARETGALKEAKDKLEKRVEELTWRLEFEKHLRMDVEEAKGQEVAKLQNALEEMQGQLDEANAAIIREREAAKLAIEQAPPVIKEVPVVDETKLEMLRNHNEELEGEVGELKKKIEEFEEKYAEVEKESKARLKEAEEAHLKSLQLQEAIERLESNLSSLESENQVLRQQALVAADNESLSEEVQALKSKIGSLEAENEVLRNRPVAVEHISVPAGALTESKTLDNGHVKEEEIKSTKEPSTVPILVKQGSLTEKQQENHDVLLKCLAEDKRFDKGRPVAACIVYKTLLQWRSFEAEKTNIFDRIIHTIRSSIESQENISDFAYWLSTTSTLLYLLQSSLKATNTSTVASHRNRASPATLFGRMAYGLRSSSVGMGISSGYSGMVGKTNNQSKVEAKYPALLFKQHLAACIEKLFGMIRDNLKKEISPFLHLCIQAPRSVKSRSIRGSSKNIHSNIVAKQQASSIHWQSIVNKLDQTLDIMSENHVPSMIMRKIFFQVFSFINVQLFNSLLLRRECCSFSNGEYLKLGLQELEQWCNKATDTYAGSSWDELQHIRQAVGFLVLLQKSQKSLNEITDELCPILSIPQIYRIGTMFWDDKYGTQGLSPDIIGKMRVLLAEDSINIPNNSFLLDVDSSIPFSMEEIFRSFGEDGGVNLSDVDPPPLIRQRSDFHFLVQQLTE 1581
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 3326430 3338909 + CrPI670011_09g003410.1 Cre09g0341 507009
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0341 1581 SMART iq_5 853 875 IPR000048 GO:0005515(InterPro)
Cre09g0341 1581 SMART iq_5 780 802 IPR000048 GO:0005515(InterPro)
Cre09g0341 1581 SMART iq_5 876 898 IPR000048 GO:0005515(InterPro)
Cre09g0341 1581 SMART iq_5 828 850 IPR000048 GO:0005515(InterPro)
Cre09g0341 1581 SMART iq_5 757 779 IPR000048 GO:0005515(InterPro)
Cre09g0341 1581 SMART iq_5 805 827 IPR000048 GO:0005515(InterPro)
Cre09g0341 1581 Coils Coil 1079 1106 - -
Cre09g0341 1581 Gene3D - 757 807 - -
Cre09g0341 1581 Gene3D - 808 858 - -
Cre09g0341 1581 Coils Coil 900 934 - -
Cre09g0341 1581 Gene3D Myosin VI head, motor domain, U50 subdomain 336 625 - -
Cre09g0341 1581 CDD MYSc_Myo11 116 743 IPR036018 -
Cre09g0341 1581 FunFam Class V myosin 463 607 - -
Cre09g0341 1581 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 809 IPR027417 -
Cre09g0341 1581 ProSiteProfiles IQ motif profile. 758 785 - -
Cre09g0341 1581 SMART MYSc_2a 96 756 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre09g0341 1581 Coils Coil 996 1072 - -
Cre09g0341 1581 Gene3D - 691 753 - -
Cre09g0341 1581 PRINTS Myosin heavy chain signature 506 534 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre09g0341 1581 PRINTS Myosin heavy chain signature 132 151 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre09g0341 1581 PRINTS Myosin heavy chain signature 453 481 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre09g0341 1581 PRINTS Myosin heavy chain signature 189 214 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre09g0341 1581 Pfam Myosin head (motor domain) 104 743 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre09g0341 1581 FunFam Myosin 2 336 451 - -
Cre09g0341 1581 Coils Coil 939 973 - -
Cre09g0341 1581 FunFam Myosin XI D 691 753 - -
Cre09g0341 1581 SMART DIL_2 1395 1502 IPR002710 -
Cre09g0341 1581 Pfam Myosin N-terminal SH3-like domain 49 87 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre09g0341 1581 ProSiteProfiles IQ motif profile. 877 906 - -
Cre09g0341 1581 ProSiteProfiles Dilute domain profile. 1205 1520 IPR002710 -
Cre09g0341 1581 PANTHER MYOSIN 52 1517 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Cre09g0341 1581 ProSiteProfiles Myosin motor domain profile. 102 755 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre09g0341 1581 ProSiteProfiles IQ motif profile. 781 810 - -
Cre09g0341 1581 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 809 906 IPR027417 -
Cre09g0341 1581 ProSiteProfiles IQ motif profile. 806 832 - -
Cre09g0341 1581 Gene3D - 276 334 - -
Cre09g0341 1581 Gene3D - 463 647 - -
Cre09g0341 1581 FunFam unconventional myosin-Va 857 904 - -
Cre09g0341 1581 CDD MyosinXI_CBD 1156 1543 IPR037975 GO:0007015(InterPro)
Cre09g0341 1581 FunFam Myosin heavy chain 276 331 - -
Cre09g0341 1581 ProSiteProfiles IQ motif profile. 829 858 - -
Cre09g0341 1581 Pfam IQ calmodulin-binding motif 831 850 IPR000048 GO:0005515(InterPro)
Cre09g0341 1581 Pfam IQ calmodulin-binding motif 761 778 IPR000048 GO:0005515(InterPro)
Cre09g0341 1581 Pfam IQ calmodulin-binding motif 782 801 IPR000048 GO:0005515(InterPro)
Cre09g0341 1581 Pfam IQ calmodulin-binding motif 879 898 IPR000048 GO:0005515(InterPro)
Cre09g0341 1581 Pfam IQ calmodulin-binding motif 808 827 IPR000048 GO:0005515(InterPro)
Cre09g0341 1581 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 48 97 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cre09g0341 1581 Pfam DIL domain 1396 1499 IPR002710 -
Cre09g0341 1581 FunFam unconventional myosin-Va 809 856 - -
Cre09g0341 1581 FunFam unconventional myosin-Va 760 808 - -
Cre09g0341 1581 Gene3D Kinesin motor domain 105 686 IPR036961 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1801 Cre-Chr3:34849199 Cre09g0341 Cre-Chr9:3326430 0.00E+00 dispersed
Cre05g0467 Cre-Chr5:4215094 Cre09g0341 Cre-Chr9:3326430 0.00E+00 dispersed
Cre08g0922 Cre-Chr8:22370890 Cre09g0341 Cre-Chr9:3326430 0.00E+00 dispersed
Cre09g0341 Cre-Chr9:3326430 Cre09g0765 Cre-Chr9:7501834 0.00E+00 dispersed
Cre09g0341 Cre-Chr9:3326430 Cre06g0901 Cre-Chr6:2375693 0.00E+00 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0341 K10357 - csv:101207221 2856.63