Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cre09g0341 | ATGAAACGACATCGTACCCCACCACGGCGGGTGGTGGGTGGGTGCGTGGCGGTGGACTGTGGACTGTGGAGGGGGAAGCTCCATCTAAAGCCAAAGACTGTTTCTTTGTGGGTTCCCACACTTGGGACTCCGGTGAATATCATCGTCGGATCACATGTTTGGGTTGAGGATCCTGAGGATGCTTGGATTGAAGGGCAAGTTACAGAAATTAATGGCAAAAATGCTACTATACTCACTACCAATGAAAAAACTATTGTTGCAGAAATTTCGAGTATATATCCGAAAGACACGGAGGCGCCGCCGGCGGGGGTTGACGACATGACGAAATTGGCGTATCTTCATGAACCGGGAGTTCTGCATAACCTAGCTTGTCGATTTTCTCTCAATGAAATATACACATACACCGGGAATATTCTAATTGCGGTGAATCCTTTCCGGCGACTGCCCCATTTGTATGATATTCACATGATGGAACAATATAAAGGAGCTCCTTTCGGCGAACTTAGTCCACATCTTTTCGCTGTTGCAGATGCTTGCTATAGATCGATGATTAACGAGCAAGGAAGTCAGTCCATATTAGTGAGTGGAGAGAGTGGTGCTGGTAAAACTGAGACAACAAAGATGCTCATGAGATATCTTGCATTCATGGGAGGCAGGTCAGATACTGAAGGAAGAACAGTTGAACAACAGGTTTTGGAGGTGAGTAGCATTCGTTTTGGTAAATTTGTAGAAATACAATTTGATAAGAATTGGAAGATCTCTGGGGCTGCCATTCGTACATACCTTCTCGAGCGGTCACGTGTTTGCCAAGTCTCAGACCCTGAGAGAAACTACCATTGTTTTTACATGCTCTGTGCAGCACCACCAGAAGATGTCAAGAAATTCAAGTTAGGAGACCCGAGGACATTTCATTATCTTAATCAAACAAATTGTTATGAAGTGGCGAATGTCGATGATGCAAGAGAGTACTTAGAGACGAGAAATGCCATGGATGTTGTCGGAATCAGCCAGGAGGAACAGGATGCTATATTTCGTGTTGTGGCTTCAATACTGCATCTTGGAAACATCAACTTCATGAAAGGGAAGGAAGTTGACTCTTCCAAAGTGAAAGACGAGAAGTCTAATTATCATCTTCAAACAGCAGCAGAGCTACTCATGTGTGATGTGAAGGCACTGGAACATTCGCTCTGCCAGCGTGTCATAGTGACTCCAGATGGCAACATTACAAAGCCTTTGGACCCAGATTCAGCAGCCTTGAGTCGTGATGCATTGGCAAAAACTGTGTATTCTAGGCTGTTTGATTGGATTGTGGACAAAATTAATAGTTCAATTGGCCAAGATCCTAATGCAGCCAGCTTAATTGGAGTTCTTGATATTTATGGTTTTGAAAGCTTCAAGATCAACAGTTTTGAGCAGCTCTGTATCAACCTGACCAATGAGAAGTTGCAGCAACATTTTAATCAGCATGTTTTCAAGATGGAGCAAGAGGAGTATACGAAGGAAGAAATAAACTGGAGCTATGTTGAGTTTGTAGATAATCAGGATGTCCTTGATCTTATTGAGAAGAAACCTGGAGGTATAATCGCCCTGCTCGATGAAGCCTGTATGTTTCCAAAGTCAACACACGAAACATTTGCTCAAAAGATGTATCAGACGTACAAAGGACATAAGCGGTTCAGCAAGCCAAAACTTGCTCGAACAGACTTCACAATAAACCATTATGCTGGAGATGTTACATACCAAGCAGATCAATTTCTTGATAAAAACAAGGACTATGTAGTAGCAGAACATCAGGCTCTTCTAAATGCCTCACGATGCTCTTTTGTTGCTAATCTTTTCCCTCCACTTCCTGAGGAGAGCTCAAAGCAATCCAAGTTTTCCTCTATTGGTACTCGGTTCAAGCAACAACTACAAGCTCTCATGGAAACATTGAATACTACAGAACCACATTATATTAGATGTGTAAAGCCCAACACAGTTTTGAAACCTGGCATCTTTGAGAACTTCAACGTGTTGAACCAATTGAGGTGTGGGGGAGTGCTCGAGGCAATTAGGATAAGTTGTGCAGGATATCCAACAAAAAGAACATTTGACGAGTTCCTTGATCGTTTTGGAATGCTTGCTCCAGATATTTCGGATGGCTCTGATGAAAAATCAGCATGCATTGCAATATGTGACAGAATGGGCTTAAAAGGTTATCAGATTGGAAAAACAAAAGTGTTCCTCAGAGCTGGACAAATGGCTGAGTTGGATGCACGACGAACTGAAATTTTGGCTAATGCTGTCAGACGCATCCAGCGGCAAATACGAACCCATCTAACTAGGAAAGAGTTTATCGCCCTGAGGAGAGCTACAATTCATATACAGAAACTTTGGAGAGGGCAACTTGCTCGTAAGCTGTATGAGCAAATGAGGAGAGAAGCAGCTTCAATCCGTATACAGAAGCATGCACGTGCTCACGCAGATAGAAAATCTTACAAAAAATTACTTGCATCAGCTATAGTTATTCAAACTGGTATGCGTGCAATGGCAGCTAGAAATGAGTACAGACACAGAAGAAGAACTAAGGCAGCTATCATTGTTCAGACTGAATGGCGGAGGGCATCAGCTATTTCAGCTTACAAACAGCAGCAGAAGGCAACTCTTGCCCTTCAATGCCTCTGGCGATCTAAAGTTGCAAGGAAGGAGCTTAGAAAATTAAAGATGGCTGCAAGAGAAACAGGAGCACTCAAGGAGGCCAAGGACAAATTGGAGAAACGTGTCGAGGAGCTAACATGGCGCCTAGAGTTTGAGAAGCACTTGAGGATGGATGTTGAAGAAGCTAAGGGGCAAGAGGTTGCAAAATTACAAAATGCTTTGGAAGAAATGCAAGGCCAGCTGGATGAAGCCAATGCTGCAATTATACGTGAGAGAGAAGCAGCAAAATTGGCCATAGAACAAGCTCCACCAGTCATTAAGGAAGTACCTGTGGTTGACGAGACCAAGCTAGAAATGCTGAGAAATCATAATGAAGAACTTGAGGGGGAGGTTGGAGAGCTGAAGAAGAAAATTGAGGAATTTGAAGAAAAGTATGCTGAAGTGGAAAAGGAGAGTAAAGCTAGGCTCAAGGAGGCAGAAGAGGCACATTTGAAATCGTTGCAACTTCAAGAGGCTATTGAGAGATTGGAATCAAATTTATCTAGCCTTGAGTCTGAGAACCAGGTTCTGCGCCAGCAGGCTTTGGTTGCAGCAGACAATGAGTCCCTCTCTGAAGAAGTGCAAGCCCTCAAGAGTAAGATTGGAAGTCTAGAGGCAGAGAATGAAGTTCTCCGCAACCGGCCAGTGGCTGTTGAGCATATATCTGTTCCCGCTGGAGCGCTTACAGAAAGCAAGACTTTAGATAACGGACATGTTAAGGAAGAAGAGATTAAATCAACTAAGGAACCATCTACTGTTCCCATCCTAGTTAAACAAGGTTCGCTTACAGAAAAGCAACAGGAAAATCATGATGTCCTGCTCAAGTGCTTAGCAGAAGACAAGCGTTTTGACAAGGGCAGACCAGTTGCAGCCTGTATTGTCTACAAGACACTTCTTCAATGGAGATCTTTTGAAGCAGAGAAAACAAATATATTTGACAGAATTATTCACACAATCAGATCTTCTATAGAGAGTCAAGAAAATATCAGTGATTTTGCATATTGGCTTTCAACCACTTCCACCCTTCTCTATCTTCTTCAAAGTTCACTCAAGGCAACCAATACAAGTACTGTAGCTTCACATCGCAACCGAGCTTCTCCTGCAACTTTATTTGGTCGTATGGCATATGGTCTTCGATCATCTTCAGTGGGTATGGGAATTTCCAGTGGATACAGTGGAATGGTGGGCAAGACAAACAATCAGTCTAAAGTTGAAGCCAAGTACCCAGCACTTCTTTTTAAGCAACATCTGGCAGCATGCATTGAAAAATTGTTTGGGATGATACGTGATAATTTGAAGAAAGAAATTAGTCCTTTCTTGCATCTATGTATTCAGGCACCAAGATCTGTGAAGTCCAGATCAATAAGAGGGTCATCTAAAAATATCCATTCAAACATTGTTGCAAAACAGCAAGCATCAAGTATTCACTGGCAAAGCATTGTTAATAAGCTAGACCAAACGTTGGATATAATGTCTGAAAACCATGTTCCCTCCATGATCATGAGAAAAATCTTCTTCCAAGTTTTCTCATTCATAAATGTCCAGCTTTTCAATAGCTTGTTACTACGACGTGAGTGTTGTTCCTTCAGTAATGGAGAGTACTTGAAGTTGGGTCTGCAGGAGTTGGAGCAATGGTGTAACAAAGCTACCGATACGTATGCTGGCTCTTCTTGGGATGAACTTCAACACATAAGACAAGCAGTAGGATTTCTGGTGTTACTCCAGAAATCCCAGAAAAGTTTGAATGAGATCACAGATGAATTGTGCCCGATTCTGAGCATTCCGCAAATATATCGCATAGGCACGATGTTCTGGGATGACAAATATGGAACTCAGGGATTATCTCCTGATATAATTGGAAAAATGAGAGTCCTATTGGCAGAAGACTCCATAAACATCCCAAACAACTCTTTCCTGCTTGATGTGGATTCAAGCATACCATTTTCAATGGAAGAAATATTCCGGTCCTTTGGCGAGGATGGCGGGGTTAACCTTTCCGACGTTGACCCGCCACCACTTATAAGACAAAGATCGGATTTCCATTTTCTAGTGCAGCAACTGACTGAATGA | 4746 | 42.58 | MKRHRTPPRRVVGGCVAVDCGLWRGKLHLKPKTVSLWVPTLGTPVNIIVGSHVWVEDPEDAWIEGQVTEINGKNATILTTNEKTIVAEISSIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLACRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGAPFGELSPHLFAVADACYRSMINEQGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSDTEGRTVEQQVLEVSSIRFGKFVEIQFDKNWKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKKFKLGDPRTFHYLNQTNCYEVANVDDAREYLETRNAMDVVGISQEEQDAIFRVVASILHLGNINFMKGKEVDSSKVKDEKSNYHLQTAAELLMCDVKALEHSLCQRVIVTPDGNITKPLDPDSAALSRDALAKTVYSRLFDWIVDKINSSIGQDPNAASLIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFSKPKLARTDFTINHYAGDVTYQADQFLDKNKDYVVAEHQALLNASRCSFVANLFPPLPEESSKQSKFSSIGTRFKQQLQALMETLNTTEPHYIRCVKPNTVLKPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFDEFLDRFGMLAPDISDGSDEKSACIAICDRMGLKGYQIGKTKVFLRAGQMAELDARRTEILANAVRRIQRQIRTHLTRKEFIALRRATIHIQKLWRGQLARKLYEQMRREAASIRIQKHARAHADRKSYKKLLASAIVIQTGMRAMAARNEYRHRRRTKAAIIVQTEWRRASAISAYKQQQKATLALQCLWRSKVARKELRKLKMAARETGALKEAKDKLEKRVEELTWRLEFEKHLRMDVEEAKGQEVAKLQNALEEMQGQLDEANAAIIREREAAKLAIEQAPPVIKEVPVVDETKLEMLRNHNEELEGEVGELKKKIEEFEEKYAEVEKESKARLKEAEEAHLKSLQLQEAIERLESNLSSLESENQVLRQQALVAADNESLSEEVQALKSKIGSLEAENEVLRNRPVAVEHISVPAGALTESKTLDNGHVKEEEIKSTKEPSTVPILVKQGSLTEKQQENHDVLLKCLAEDKRFDKGRPVAACIVYKTLLQWRSFEAEKTNIFDRIIHTIRSSIESQENISDFAYWLSTTSTLLYLLQSSLKATNTSTVASHRNRASPATLFGRMAYGLRSSSVGMGISSGYSGMVGKTNNQSKVEAKYPALLFKQHLAACIEKLFGMIRDNLKKEISPFLHLCIQAPRSVKSRSIRGSSKNIHSNIVAKQQASSIHWQSIVNKLDQTLDIMSENHVPSMIMRKIFFQVFSFINVQLFNSLLLRRECCSFSNGEYLKLGLQELEQWCNKATDTYAGSSWDELQHIRQAVGFLVLLQKSQKSLNEITDELCPILSIPQIYRIGTMFWDDKYGTQGLSPDIIGKMRVLLAEDSINIPNNSFLLDVDSSIPFSMEEIFRSFGEDGGVNLSDVDPPPLIRQRSDFHFLVQQLTE | 1581 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 3326430 | 3338909 | + | CrPI670011_09g003410.1 | Cre09g0341 | 507009 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cre09g0341 | 1581 | SMART | iq_5 | 853 | 875 | IPR000048 | GO:0005515(InterPro) | |
| Cre09g0341 | 1581 | SMART | iq_5 | 780 | 802 | IPR000048 | GO:0005515(InterPro) | |
| Cre09g0341 | 1581 | SMART | iq_5 | 876 | 898 | IPR000048 | GO:0005515(InterPro) | |
| Cre09g0341 | 1581 | SMART | iq_5 | 828 | 850 | IPR000048 | GO:0005515(InterPro) | |
| Cre09g0341 | 1581 | SMART | iq_5 | 757 | 779 | IPR000048 | GO:0005515(InterPro) | |
| Cre09g0341 | 1581 | SMART | iq_5 | 805 | 827 | IPR000048 | GO:0005515(InterPro) | |
| Cre09g0341 | 1581 | Coils | Coil | 1079 | 1106 | - | - | |
| Cre09g0341 | 1581 | Gene3D | - | 757 | 807 | - | - | |
| Cre09g0341 | 1581 | Gene3D | - | 808 | 858 | - | - | |
| Cre09g0341 | 1581 | Coils | Coil | 900 | 934 | - | - | |
| Cre09g0341 | 1581 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 336 | 625 | - | - | |
| Cre09g0341 | 1581 | CDD | MYSc_Myo11 | 116 | 743 | IPR036018 | - | |
| Cre09g0341 | 1581 | FunFam | Class V myosin | 463 | 607 | - | - | |
| Cre09g0341 | 1581 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 75 | 809 | IPR027417 | - | |
| Cre09g0341 | 1581 | ProSiteProfiles | IQ motif profile. | 758 | 785 | - | - | |
| Cre09g0341 | 1581 | SMART | MYSc_2a | 96 | 756 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre09g0341 | 1581 | Coils | Coil | 996 | 1072 | - | - | |
| Cre09g0341 | 1581 | Gene3D | - | 691 | 753 | - | - | |
| Cre09g0341 | 1581 | PRINTS | Myosin heavy chain signature | 506 | 534 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre09g0341 | 1581 | PRINTS | Myosin heavy chain signature | 132 | 151 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre09g0341 | 1581 | PRINTS | Myosin heavy chain signature | 453 | 481 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre09g0341 | 1581 | PRINTS | Myosin heavy chain signature | 189 | 214 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre09g0341 | 1581 | Pfam | Myosin head (motor domain) | 104 | 743 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre09g0341 | 1581 | FunFam | Myosin 2 | 336 | 451 | - | - | |
| Cre09g0341 | 1581 | Coils | Coil | 939 | 973 | - | - | |
| Cre09g0341 | 1581 | FunFam | Myosin XI D | 691 | 753 | - | - | |
| Cre09g0341 | 1581 | SMART | DIL_2 | 1395 | 1502 | IPR002710 | - | |
| Cre09g0341 | 1581 | Pfam | Myosin N-terminal SH3-like domain | 49 | 87 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre09g0341 | 1581 | ProSiteProfiles | IQ motif profile. | 877 | 906 | - | - | |
| Cre09g0341 | 1581 | ProSiteProfiles | Dilute domain profile. | 1205 | 1520 | IPR002710 | - | |
| Cre09g0341 | 1581 | PANTHER | MYOSIN | 52 | 1517 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Cre09g0341 | 1581 | ProSiteProfiles | Myosin motor domain profile. | 102 | 755 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre09g0341 | 1581 | ProSiteProfiles | IQ motif profile. | 781 | 810 | - | - | |
| Cre09g0341 | 1581 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 809 | 906 | IPR027417 | - | |
| Cre09g0341 | 1581 | ProSiteProfiles | IQ motif profile. | 806 | 832 | - | - | |
| Cre09g0341 | 1581 | Gene3D | - | 276 | 334 | - | - | |
| Cre09g0341 | 1581 | Gene3D | - | 463 | 647 | - | - | |
| Cre09g0341 | 1581 | FunFam | unconventional myosin-Va | 857 | 904 | - | - | |
| Cre09g0341 | 1581 | CDD | MyosinXI_CBD | 1156 | 1543 | IPR037975 | GO:0007015(InterPro) | |
| Cre09g0341 | 1581 | FunFam | Myosin heavy chain | 276 | 331 | - | - | |
| Cre09g0341 | 1581 | ProSiteProfiles | IQ motif profile. | 829 | 858 | - | - | |
| Cre09g0341 | 1581 | Pfam | IQ calmodulin-binding motif | 831 | 850 | IPR000048 | GO:0005515(InterPro) | |
| Cre09g0341 | 1581 | Pfam | IQ calmodulin-binding motif | 761 | 778 | IPR000048 | GO:0005515(InterPro) | |
| Cre09g0341 | 1581 | Pfam | IQ calmodulin-binding motif | 782 | 801 | IPR000048 | GO:0005515(InterPro) | |
| Cre09g0341 | 1581 | Pfam | IQ calmodulin-binding motif | 879 | 898 | IPR000048 | GO:0005515(InterPro) | |
| Cre09g0341 | 1581 | Pfam | IQ calmodulin-binding motif | 808 | 827 | IPR000048 | GO:0005515(InterPro) | |
| Cre09g0341 | 1581 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 48 | 97 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Cre09g0341 | 1581 | Pfam | DIL domain | 1396 | 1499 | IPR002710 | - | |
| Cre09g0341 | 1581 | FunFam | unconventional myosin-Va | 809 | 856 | - | - | |
| Cre09g0341 | 1581 | FunFam | unconventional myosin-Va | 760 | 808 | - | - | |
| Cre09g0341 | 1581 | Gene3D | Kinesin motor domain | 105 | 686 | IPR036961 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cre03g1801 | Cre-Chr3:34849199 | Cre09g0341 | Cre-Chr9:3326430 | 0.00E+00 | dispersed | |
| Cre05g0467 | Cre-Chr5:4215094 | Cre09g0341 | Cre-Chr9:3326430 | 0.00E+00 | dispersed | |
| Cre08g0922 | Cre-Chr8:22370890 | Cre09g0341 | Cre-Chr9:3326430 | 0.00E+00 | dispersed | |
| Cre09g0341 | Cre-Chr9:3326430 | Cre09g0765 | Cre-Chr9:7501834 | 0.00E+00 | dispersed | |
| Cre09g0341 | Cre-Chr9:3326430 | Cre06g0901 | Cre-Chr6:2375693 | 0.00E+00 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cre09g0341 | K10357 | - | csv:101207221 | 2856.63 |