Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g0397 | ATGGCTATGGCTGGGCGTATGAGATCGATCATTCCTCAATTCAATCAGCTTCTGAAATCGGAGTCACTCACTCAGAGACCTGCTCTTCTAAGAGCCCTACTTTGCCCCACGACTCCCAACTCCGAGGTCTCGAGGAACTATGCAACTGCTTCCAAGAAAAGAGAGGAAAAAGTTAAAGTTCCCCTGGTTTTGTTTGGGGGTTCTGGAAACTATGCCTCTGCTTTGTACCTTGCAGCAGTAAAAGCTAATTCCTTGGATAAGGTTGAGAGAGAGCTTCTTGACCTTGTCGAGGCTTCACAGAGAAGTGCCACCTTCTCTCAGTTCACAAGAGATCCCTCAGTGTGTAAAGATACTAGGGTCAAGGCTATTGAGGATATTTGTGCTTCAGCTAAATTTTCAGAAATTGTAAAAAACTTTTTGGTTATATTGGCTGAGTATGGAAGGCTGAAATACATAGACAGCATTGCAAAGAGGTTTCTAGAGTTGACAATGGCTCATCGAGGAGAGGTGAAAGCCATTGTGACTACAGTTATTCCCCTCCCTCCTGAAGAAGAGAAAGAATTAAAGGAGACCCTGCAGGATATTATTGGACAAGGGAAAAGGGTCAAGCTTGAACAGAAGATTGATCCAAGTATTCTCGGCGGACTAGTTGTAGAATTCGGCGAGAAAGTGTTCGACATGTCAATTAAGACCAGAGCACGACAGATGGAGAGGTTCTTGCGAGAACCTGCAAACCTCAACAGCCTCTGA | 750 | 44.67 | MAMAGRMRSIIPQFNQLLKSESLTQRPALLRALLCPTTPNSEVSRNYATASKKREEKVKVPLVLFGGSGNYASALYLAAVKANSLDKVERELLDLVEASQRSATFSQFTRDPSVCKDTRVKAIEDICASAKFSEIVKNFLVILAEYGRLKYIDSIAKRFLELTMAHRGEVKAIVTTVIPLPPEEEKELKETLQDIIGQGKRVKLEQKIDPSILGGLVVEFGEKVFDMSIKTRARQMERFLREPANLNSL | 249 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 3905772 | 3909541 | - | CrPI670011_09g003970.1 | Cre09g0397 | 507065 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g0397 | 249 | Pfam | ATP synthase delta (OSCP) subunit | 69 | 238 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cre09g0397 | 249 | ProSitePatterns | ATP synthase delta (OSCP) subunit signature. | 202 | 221 | IPR020781 | GO:0015986(InterPro)|GO:0016020(InterPro)|GO:0046933(InterPro) | |
Cre09g0397 | 249 | PANTHER | ATP SYNTHASE DELTA CHAIN | 1 | 243 | IPR000711 | GO:0000274(PANTHER)|GO:0015986(InterPro)|GO:0015986(PANTHER)|GO:0042776(PANTHER)|GO:0045261(PANTHER)|GO:0046933(PANTHER)|GO:0046933(InterPro) | |
Cre09g0397 | 249 | Gene3D | - | 67 | 160 | IPR026015 | - | |
Cre09g0397 | 249 | NCBIfam | ATP synthase F1 subunit delta | 70 | 239 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cre09g0397 | 249 | SUPERFAMILY | N-terminal domain of the delta subunit of the F1F0-ATP synthase | 68 | 169 | IPR026015 | - | |
Cre09g0397 | 249 | Hamap | ATP synthase subunit delta [atpD]. | 63 | 242 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cre09g0397 | 249 | PRINTS | ATP synthase delta subunit signature | 148 | 162 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cre09g0397 | 249 | PRINTS | ATP synthase delta subunit signature | 137 | 148 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cre09g0397 | 249 | PRINTS | ATP synthase delta subunit signature | 200 | 215 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cre09g0397 | 249 | PRINTS | ATP synthase delta subunit signature | 215 | 233 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) | |
Cre09g0397 | 249 | PRINTS | ATP synthase delta subunit signature | 67 | 86 | IPR000711 | GO:0015986(InterPro)|GO:0046933(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre08g0235 | Cre-Chr8:6062838 | Cre09g0397 | Cre-Chr9:3905772 | 1.50E-07 | dispersed | |
Cre10g1390 | Cre-Chr10:27606565 | Cre09g0397 | Cre-Chr9:3905772 | 1.20E-83 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g0397 | K02137 | - | csv:101206351 | 394.045 |