Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0461 ATGGTGGCTGAAGCTGAGGTTGTTGTTTGTTCGAAGAGCCTCCCGGTTTTGGAGGTCCCGTATTTCGGTAAAGAGACTCATCTTGTGGATGAAATTGAGTCCATCGATGGTGGGATTTCCATTGATCCGACTCTCAATCGTGTTCGTGCTTCCGAATCTGTTTGTTCCAGTTCTAAATCGGATATTAAACCCATGAAGAAAATTCCAGATTCCGACGTCGATACGGAGAACGGAAGGGAATTTCCGAGCCTCCGGTCGGGGAGCTTTGCTGATATTGGCCCTAGGAGATACATGGAAGATGAACATATAAGGATAGATGATTTGTCTTCACATTTAGGATCGCTCTTTAAGTTTCCCAAGCCAAGTGCTTTCTATGGGGTATTCGATGGACATGGAGGTCCTGAAGCAGCAGCTTATATCAGAAAGAATGTTCTTAGACTCTTTTTTGAGGATGTTAGTTTTCCTCAAATTCCAGATATTGGTGAAGTCTTGCCGGAGGAGATAGAAAATTGTCTCCGAAAAGCATTTCTTCTAGCTGATCGAGCTCTGGCTGATGATTCCAGTGTCAGTAGTTCATCCGGGACAACGGCCCTGACAGCTCTTGTGCTTGGAAGGCATTTAATGGTGGCGAATGCTGGAGATTGCCGAGCTGTTCTCAGCCGGAATGGGGAGGCAGTAGATATGTCTCAAGACCACCGGCCAGTTTATTCTCCAGAGAAGCAACGGGTAGAAGAGTTGGGTGGGTTTGTTGATGGTGGCTATCTCAACGGCGTTTTATCGGTTTCCAGGGCTTTGGGGGATTGGGACATGAAGCTCCCTGATGGTTCTCCTTCGCCTCTCATTGCAGAACCAGAATGCAGGCAGGTGGTGCTTACAGAAGAGGATGAGTTCTTGATCATAGCCTGTGATGGGATTTGGGACGTGATGTCGAGCCAACAAGCAGTCAATGTAGTTCGACAGGGGCTTCAACGTCATGATGACCCTGAGCGGTGTGCTCGAGACCTCGTCCTTCAGGCTTTGCGACTAGACTCATTCGACAACCTCACTGTTGTTGTTGTTTGCTTCTCCAGTTTCCATCCTGGCAATTCTCCACGACCACAGCAGCGGAACTTAAGATACTGCAGTCTCTCTGCACAGGCTCTTTGTAGCTTGCAAAGATGGCTGGATAACAGTGGATGCCAATGA 1185 47.93 MVAEAEVVVCSKSLPVLEVPYFGKETHLVDEIESIDGGISIDPTLNRVRASESVCSSSKSDIKPMKKIPDSDVDTENGREFPSLRSGSFADIGPRRYMEDEHIRIDDLSSHLGSLFKFPKPSAFYGVFDGHGGPEAAAYIRKNVLRLFFEDVSFPQIPDIGEVLPEEIENCLRKAFLLADRALADDSSVSSSSGTTALTALVLGRHLMVANAGDCRAVLSRNGEAVDMSQDHRPVYSPEKQRVEELGGFVDGGYLNGVLSVSRALGDWDMKLPDGSPSPLIAEPECRQVVLTEEDEFLIIACDGIWDVMSSQQAVNVVRQGLQRHDDPERCARDLVLQALRLDSFDNLTVVVVCFSSFHPGNSPRPQQRNLRYCSLSAQALCSLQRWLDNSGCQ 394
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 4379641 4381329 - CrPI670011_09g004610.1 Cre09g0461 507129
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0461 394 CDD PP2Cc 85 355 IPR001932 -
Cre09g0461 394 Gene3D - 65 359 IPR036457 -
Cre09g0461 394 ProSiteProfiles PPM-type phosphatase domain profile. 85 355 IPR001932 -
Cre09g0461 394 MobiDBLite consensus disorder prediction 63 79 - -
Cre09g0461 394 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169(InterPro)
Cre09g0461 394 SMART PP2C_4 75 353 IPR001932 -
Cre09g0461 394 MobiDBLite consensus disorder prediction 59 79 - -
Cre09g0461 394 Pfam Protein phosphatase 2C 95 347 IPR001932 -
Cre09g0461 394 FunFam Probable protein phosphatase 2C 22 70 358 - -
Cre09g0461 394 PANTHER PROTEIN PHOSPHATASE 2C 68 355 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Cre09g0461 394 SMART PP2C_SIG_2 100 355 IPR001932 -
Cre09g0461 394 SUPERFAMILY PP2C-like 80 357 IPR036457 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g0318 Cre-Chr9:3085469 Cre09g0461 Cre-Chr9:4379641 3.10E-33 dispersed
Cre09g0461 Cre-Chr9:4379641 Cre11g1835 Cre-Chr11:29988373 5.20E-34 dispersed
Cre02g2032 Cre-Chr2:33842707 Cre09g0461 Cre-Chr9:4379641 7.90E-72 transposed
Cre10g1758 Cre-Chr10:31973331 Cre09g0461 Cre-Chr9:4379641 1.80E-30 transposed
Cre11g2280 Cre-Chr11:34511999 Cre09g0461 Cre-Chr9:4379641 1.50E-89 transposed
Cre06g1191 Cre-Chr6:5767442 Cre09g0461 Cre-Chr9:4379641 7.60E-105 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0461 K14803 - csv:101216626 712.605