Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0574 ATGGCCAGCATCAAAGTCCATGGACTCGCCCTTTCCGTACCAACATGCAAGGTTCTAGCTTGTCTCTACGAGAAAGACCTCGAATTCGAGTTTATCAATGTCAAGATGCACGAAGCGGAACATAAGAAACCCCACTTTCTCTCCATCAATCCTTTTGGTCAAATTCCTGGGTTCCAAGATGGGGATTTGACACTTTTTGAATCCAGGGCAATCACGCAGTACATCGCGAGAAATTATGCTAACAATGGAACCCAATTGATTCCCCAAGACATAAAGCAAGCAGCTACAGTATTAACATGGATTGAAGTGGAGAGTCATCATTTTGATCCACCAGCCTCGAAACTTGTGTATGAGCTCTGTTTGAAGCCAAAGCTTGGTTGGGGTGAGACAGATGCTACAGTGGTTGAGCAAAAGGAAGCTGAGTTAGCCAAAGTTGTTGATATCTATGAGAAGAAGCTGGCTCAATCCAAGTACTTGGGAGGGGAGTCCTTCAGTTTGGCTGATTTGCTCCATATCCCAGCCATAGGGTTCTTGTTGGAGACACAAACCAAGGAACTGTTTGAATCTCGGCCCCATGTCAATGCTTGGGTGGCTGATATCATGGCCAGGCCGGCTTGGGCTAAGGTGCTTGCTTTGCGTAAGTAA 645 46.2 MASIKVHGLALSVPTCKVLACLYEKDLEFEFINVKMHEAEHKKPHFLSINPFGQIPGFQDGDLTLFESRAITQYIARNYANNGTQLIPQDIKQAATVLTWIEVESHHFDPPASKLVYELCLKPKLGWGETDATVVEQKEAELAKVVDIYEKKLAQSKYLGGESFSLADLLHIPAIGFLLETQTKELFESRPHVNAWVADIMARPAWAKVLALRK 214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5405033 5405847 + CrPI670011_09g005740.1 Cre09g0574 507242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0574 214 Pfam Glutathione S-transferase, C-terminal domain 113 204 IPR004046 -
Cre09g0574 214 SUPERFAMILY GST C-terminal domain-like 74 213 IPR036282 -
Cre09g0574 214 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 214 IPR010987 -
Cre09g0574 214 Pfam Glutathione S-transferase, N-terminal domain 13 77 IPR004045 -
Cre09g0574 214 CDD GST_C_Phi 92 210 IPR034347 -
Cre09g0574 214 Gene3D - 90 214 - -
Cre09g0574 214 FunFam Glutathione S-transferase F2 3 87 - -
Cre09g0574 214 CDD GST_N_Phi 4 78 - -
Cre09g0574 214 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 213 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Cre09g0574 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Cre09g0574 214 SUPERFAMILY Thioredoxin-like 1 88 IPR036249 -
Cre09g0574 214 Gene3D Glutaredoxin 2 87 - -
Cre09g0574 214 SFLD Glutathione Transferase (cytosolic) 1 212 IPR040079 -
Cre09g0574 214 SFLD Main.5: Phi-like 1 212 - -
Cre09g0574 214 FunFam Glutathione S-transferase F2 88 210 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g0574 Cre-Chr9:5405033 Cre09g0576 Cre-Chr9:5410583 9.00E-49 dispersed
Cre09g0573 Cre-Chr9:5394128 Cre09g0574 Cre-Chr9:5405033 2.10E-90 tandem
Cre09g0574 Cre-Chr9:5405033 Cre09g0575 Cre-Chr9:5406964 3.50E-77 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0574 K00799 - csv:101212536 384.03