Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0575 ATGGCGAGCATCAAAGTCCATGGAAGCCCCATTTCCACTGCCACAGCCAGAGTTCTCGCTTGTCTTTATGAGAAAGATCTCGATTACGAGTTTGTTCTTCTGGATATGAAAAATAACGAGCACAAGAAACACCCCTTTCTCTCCATTAACCCGTTTGGTCAAGTTCCTGGGTTTCAAGATGGGGATCTCACCATTTTCGAATCAAGGGCCATTACTCAATACTTGGCCAACGCCTACGCCAGCAAGGGAACCCAATTGATCTCCAACGACCCGAAGAAAGCGGCGATCATATCAACGTGGATTGAAGTGGAGGGCCACCATTACGACCCACCGGCGGTTGCTCTGTCGTTTGAGCATCTAGTCAAGCCGCTGTTTGGACTCGGTGAAACTGATCCCGCAGCGGTAGCGGAGAACGAAGCCAAGTTGGGGAAAGTTCTTGACATCTACGAGAATCAGCTTAGCAGAAACAAGTTCTTGGCTGGGGATGAGTTCAGTTTGGCGGATCTGCATCACATACCCAATGTGAGCTACTTGTTCATGACGCCGTCGAAGAAGCTGTTCGAGTCACGGCCACGTGTCAACGCTTGGGTGGCCGAGATCACTGCAAGGCCTTCGTGGGCTAAGGTTGTTGCCTTGCGCAACCAGAGTTAA 651 50.54 MASIKVHGSPISTATARVLACLYEKDLDYEFVLLDMKNNEHKKHPFLSINPFGQVPGFQDGDLTIFESRAITQYLANAYASKGTQLISNDPKKAAIISTWIEVEGHHYDPPAVALSFEHLVKPLFGLGETDPAAVAENEAKLGKVLDIYENQLSRNKFLAGDEFSLADLHHIPNVSYLFMTPSKKLFESRPRVNAWVAEITARPSWAKVVALRNQS 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5406964 5408446 - CrPI670011_09g005750.1 Cre09g0575 507243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0575 216 Gene3D - 90 214 - -
Cre09g0575 216 Gene3D Glutaredoxin 1 87 - -
Cre09g0575 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Cre09g0575 216 FunFam Glutathione S-transferase F2 88 210 - -
Cre09g0575 216 CDD GST_C_Phi 92 210 IPR034347 -
Cre09g0575 216 Pfam Glutathione S-transferase, C-terminal domain 129 204 IPR004046 -
Cre09g0575 216 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 215 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Cre09g0575 216 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Cre09g0575 216 SFLD Main (cytGST) 1 212 - -
Cre09g0575 216 CDD GST_N_Phi 4 76 - -
Cre09g0575 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 216 IPR010987 -
Cre09g0575 216 SUPERFAMILY Thioredoxin-like 1 82 IPR036249 -
Cre09g0575 216 FunFam Glutathione S-transferase F2 3 87 - -
Cre09g0575 216 SUPERFAMILY GST C-terminal domain-like 74 212 IPR036282 -
Cre09g0575 216 SFLD Main.5: Phi-like 1 212 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre08g1345 Cre-Chr8:26506075 Cre09g0575 Cre-Chr9:5406964 5.40E-49 dispersed
Cre09g0573 Cre-Chr9:5394128 Cre09g0575 Cre-Chr9:5406964 1.80E-81 dispersed
Cre09g0574 Cre-Chr9:5405033 Cre09g0575 Cre-Chr9:5406964 3.50E-77 tandem
Cre09g0575 Cre-Chr9:5406964 Cre09g0576 Cre-Chr9:5410583 6.30E-50 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0575 K00799 - csv:101212771 412.92