Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0576 ATGGCGGTGAAGGTGTACGGATTGGCGATCTCAACATGCACATCTACCGTCATTATTTGCCTTAATGAAAAGCAACTTGATTTCCAACTTCTCCATGTTGACCTTTTCAATGGTGAACACAAGCAACCTCCATTTTTGGCCATCAATCCCTTTGGCCAGATTCCAGCCCTAGAAGATGGTGATCTCACCTTATTTGAATCAAGAGCAATCACATCCTACATTGCAAACAAGCACAAGGAAACAGGGCCAGATCTCCTATTGCATCACCAAAGCCCCAAAGAAGGAGCCATTGTGAAGCAATGGATAGAGGTAGAGTCTCAGCATTACAACCCTGCAATAACTCCCATCATCCATGAGTTCTTCACTGCTCACCTTCGAGGCCACGAGCCCGACCAGCGCCTCATCGACCAGAACTTGGAGCGCCTACGCGCCGTTCTCGACGTGTATGAGCAGCGCCTAGGGTCCACCAAGTACCTGGGCGGGCCGTGGTACACCTTGGCCGATCTCCACCACCTCCCTTGCACGTTCTACTTCATGAAGACGCCATGGGCCTCAATGGTTAAGGATCGGCCGAATGTGAAGGCTTGGTGGGATGACATTTCATCCCGCCCCGCGTTCCTTAAGGTTATTGAGGGGATGAGTACTTTTGACTTTGCTGGCGATGACAAGAAATGA 675 50.22 MAVKVYGLAISTCTSTVIICLNEKQLDFQLLHVDLFNGEHKQPPFLAINPFGQIPALEDGDLTLFESRAITSYIANKHKETGPDLLLHHQSPKEGAIVKQWIEVESQHYNPAITPIIHEFFTAHLRGHEPDQRLIDQNLERLRAVLDVYEQRLGSTKYLGGPWYTLADLHHLPCTFYFMKTPWASMVKDRPNVKAWWDDISSRPAFLKVIEGMSTFDFAGDDKK 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5410583 5412716 - CrPI670011_09g005760.1 Cre09g0576 507244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0576 224 FunFam Glutathione S-transferase F2 89 210 - -
Cre09g0576 224 SFLD Glutathione Transferase (cytosolic) 1 213 IPR040079 -
Cre09g0576 224 CDD GST_C_Phi 93 210 IPR034347 -
Cre09g0576 224 CDD GST_N_Phi 2 77 - -
Cre09g0576 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Cre09g0576 224 Pfam Glutathione S-transferase, N-terminal domain 1 76 IPR004045 -
Cre09g0576 224 Gene3D Glutaredoxin 1 86 - -
Cre09g0576 224 SUPERFAMILY Thioredoxin-like 2 81 IPR036249 -
Cre09g0576 224 Gene3D - 88 210 - -
Cre09g0576 224 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 213 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Cre09g0576 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 224 IPR010987 -
Cre09g0576 224 SFLD Main.5: Phi-like 1 213 - -
Cre09g0576 224 Pfam Glutathione S-transferase, C-terminal domain 116 204 IPR004046 -
Cre09g0576 224 SUPERFAMILY GST C-terminal domain-like 73 213 IPR036282 -
Cre09g0576 224 FunFam Glutathione S-transferase F2 2 86 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g0574 Cre-Chr9:5405033 Cre09g0576 Cre-Chr9:5410583 9.00E-49 dispersed
Cre09g0575 Cre-Chr9:5406964 Cre09g0576 Cre-Chr9:5410583 6.30E-50 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0576 K00799 - vvi:100247639 299.286