Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0579 ATGGCCGGAGAAGTAGAAATAGACGATCTGAACAACAGTCCCAAAATGCTGTCACGGCCGAAACTACGGCGTTTCGACTCATTAGACATTGAATCGAACAAGCTGGACGGCGGCCGTGGGCACCGCGCCGCCGCGGGGTGGTTGGTGACTCTGCAACTGGCGTTTCAGAGCATCGGGATAGTGTACGGAGACATCGGAACGTCGCCGTTGTACGTTTTTCAAAGCACTTTTCCGGCAGGGATAAAACATAAGGACGACGTTTTGGGAGTTCTATCGTTGATTTATTATACGCTCACTTTGATTCCTCTCTTTAAGTACGTCTTCATCGTCTTGCAGGCTAACGACAATGGCGACGGAGGGACATTTGCATTGTATTCTCTACTTTGCCGATATGCAAGAATAGGGTTAATACCTAGCCAACAAGTTGAGGATCGGGAGGTTTCTAATTACCGATTAGACATTCCCAACAACCGTGTGCGGCGGGCGTCGTGGTTGAAGTCTCAACTCGAGAACCGCCGCTCTGCCAAGCTTTTCTTGCTCTTTGCCACTATGCTCGGCACCTCCATGGTCATCGGTGACGGGGTTCTCACTCCTTGCATTTCTGTTTTGTCCGCTGTTGGAGGCATTAAGAGAGCTAGACCTTCAATAACACAAGATACAATAGTGGGGATATCAGCTGGTATATTGGTGTGTCTTTTCATGGCTCAAAGATTTGGAACAGACAAAGTTGGATACACATTTGCTCCAATTATATGCATTTGGTTCAGTTTCATAGCTGCCATTGGTTTCTACAATTTTGTCAAGTTTGATCCTTCAGTCATCAAAGCTTTAAACCCTAAATATATCATTCACTATTTTATAAGGAACAAAACCCAAGCTTGGATTTCCCTTGGTGGCATTGTTCTCTCCATAACAGGGACAGAAGCATTATTTGCTGATGTTGGGCATTTCAGTGTGAAATCAATTCAAATAAGCATGTGTGCTGTTACCTATCCAGCTTTATTGCTTGCTTACACAGGACAAGCCTCTTACCTTCACACACACATTAATGAAGTTGGAGACACCTTCTTCAAATCCATTCCAGAACGTTTATACTGGCCAATGTTTGTGGTGGCCGTATTATCAGCCATTATTGCAAGCCAAGCTATGATTTCAGGAACATTCTCTATCATTCAACAATCCCTTTCACTTGGGTGTTTCCCAAGAGTCAAAGTTGTTCATACTTCTTCCAAGTATGAAGGCCAAGTTTATATCCCTGAGGTTAACTTTCTACTCATGCTTGCTTGTTTGGTTGTCACTCTTGCCTTCAAGGAGACTGACAAGATAGGAAATGCCTATGGCATAGCCGTTGTGTTTGTGATGACCCTCACATCCTCATTTTTAGTATTAATCATGATCATGATATGGAAAACCCACATGATTTTGATAATCATTTACATTCTTGTCATTGGGTCAGTGGAACTTCTTTATTTGAGTTCAGTTCTTTACAAGTTTGATCAAGGAGGTTACCTTCCACTTGCTTTTGCCTTTGCACTTATGGCCATAATGTATACTTGGAACACTGTCTATAGAAGAAAATACTATTATGAGCTTGACAACAAGATCTCTTCTCATCAACTCAAGGACATTGTATCAAATGCCAATCCTTGTAGAGTTCAAGGCCTTGCCATTTTCTACTCTGAGCTTGTACAAGGCATTCCTCCTATTTTCAAGCTTTACATGGCCAACGTCCCCGTCCTTCATCGAGTCCTCGTCTTCGTCTCGATCAAGTCGTTGCCTATTAGCAAGGTCCCATTAGACGAGCGGTTTCTCTTTTGCAGAGTTGAGCCGAGAGAGCTTAATATCTTTCGATGCGTCGTGCGATACGGATACATAGACGATCGAAACGAGCGAGAGTCGTTCGAGAGGAGTTTGGTGGAGAGATTGAAAAGGTTCTTAAGGGATGATGTTAGGGTTACTACCAAAGTGGAGGAGGAGAAAGATCATGAGAATGGGATAATAATTGAGGAAGAGAAACACAAGATTAGAGAAGTGGAATTGGAGGATGACATTGAGGAAGTTGATAAAGCTTGGGAAAATGGTGTGGTTCATTTGGTTGGAGAAAGTGAAGTTGTTGCTAAGGAAGGATCTAATATTTGGAAGAGGGTTTTGATTGATTATGCTTACAATTTCTTGAAGAACAATTTGAGACAAAGTGAGAGAGTCTTTGATATTCCTCACAAACGTTTGCTCAAAGTGGGAATGACATATGAACTTTAA 2259 42.59 MAGEVEIDDLNNSPKMLSRPKLRRFDSLDIESNKLDGGRGHRAAAGWLVTLQLAFQSIGIVYGDIGTSPLYVFQSTFPAGIKHKDDVLGVLSLIYYTLTLIPLFKYVFIVLQANDNGDGGTFALYSLLCRYARIGLIPSQQVEDREVSNYRLDIPNNRVRRASWLKSQLENRRSAKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKRARPSITQDTIVGISAGILVCLFMAQRFGTDKVGYTFAPIICIWFSFIAAIGFYNFVKFDPSVIKALNPKYIIHYFIRNKTQAWISLGGIVLSITGTEALFADVGHFSVKSIQISMCAVTYPALLLAYTGQASYLHTHINEVGDTFFKSIPERLYWPMFVVAVLSAIIASQAMISGTFSIIQQSLSLGCFPRVKVVHTSSKYEGQVYIPEVNFLLMLACLVVTLAFKETDKIGNAYGIAVVFVMTLTSSFLVLIMIMIWKTHMILIIIYILVIGSVELLYLSSVLYKFDQGGYLPLAFAFALMAIMYTWNTVYRRKYYYELDNKISSHQLKDIVSNANPCRVQGLAIFYSELVQGIPPIFKLYMANVPVLHRVLVFVSIKSLPISKVPLDERFLFCRVEPRELNIFRCVVRYGYIDDRNERESFERSLVERLKRFLRDDVRVTTKVEEEKDHENGIIIEEEKHKIREVELEDDIEEVDKAWENGVVHLVGESEVVAKEGSNIWKRVLIDYAYNFLKNNLRQSERVFDIPHKRLLKVGMTYEL 752
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5436441 5448291 + CrPI670011_09g005790.1 Cre09g0579 507247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0579 752 Pfam K+ potassium transporter integral membrane domain 53 539 IPR053951 -
Cre09g0579 752 Pfam K+ potassium transporter C-terminal domain 554 752 IPR053952 -
Cre09g0579 752 NCBIfam potassium uptake protein 53 751 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cre09g0579 752 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 43 751 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre09g0579 Cre-Chr9:5436441 Cre11g0535 Cre-Chr11:2351729 5.20E-184 dispersed
Cre09g0579 Cre-Chr9:5436441 Cre09g0580 Cre-Chr9:5454313 7.50E-292 tandem
Cre10g1217 Cre-Chr10:24847580 Cre09g0579 Cre-Chr9:5436441 5.50E-290 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0579 K03549 - csv:101204520 1277.31