Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0580 ATGGAAGTCGATCGGACGGCCGAAAACGATCACTTTCCCGATTTCCAAGAAAGCTCCGACGACTCAACCCCCGACTTGCCGGAAAGGAAGCTCCGACGAAACGATTCATTGGACGTAGAATCCGGCACCGTCTCCGGCGCCGGCGCCCATGGCCACAAGGCGGCGGCGACGGCAAGCTGGGGAGTGATTTTACATCTGGCGTTTCAGAGCGTGGGAATTGTGTACGGCGATATCGGAACGTCGCCGTTGTATGTGTATGCAAGCACATTCACGGACGGAATCAAGCATAACGACGACGTTTTGGGTGTCCTGTCTTTGATTCTTTACACTCTCACTTTGATCCCTTTGCTTAAGTATGTCTTCTTCGTCTTGCAAGCCAATGACAACGGCGAAGGTGGAACATTTGCTTTATACTCATTACTATGCCGATACGCAAAAATTGGGCTAATACCAAGCCAGCAAGTGGAAGATCAAGAGGTATCAAATTTTCAGGTGGACCTTCCCTCCGGCCGCCTTAAAATGGCGTCTTGCCTTAAATCCAAACTTGAAAACACCACCGCCGCCAAGATTTTCTTGCTCTTCGCCACCATGCTCGGCACTTCCATGGTCATCGGCGACGGCGTCCTCACTCCTTCCATCTCTGTTTTGTCGGCCGTCGGAGGAATCAAGAATGCAACCTCGACCATGACACAAGATAAAATAGTTTGGATATCAGCAGCAATCTTGGTTTGCTTATTCATGGTACAAGGATTTGGAACCCATAAAGTTGGATATTCCTTTGCTCCAATTATTTGCATTTGGTTTGCACTTATTGCTGGAATTGGCTTCTACAATTTTTTGAAATTTGACCCTGCTGTCATCAAAGCTGTTAATCCAAAATACATTTTTGACTACTTCAAAAGAAACAAAAAGGACGCTTGGATCTCTCTCGGTGGTGTCGTTCTTGCCATTACTGGGACTGAAGCTCTCTTTGCGGACGTGGGGCACTTCACTGTGATGTCCATAAGACTAAGCATGTGTTGTGTGGCCTACCCCGCCCTAGTCTCCGCCTATGTCGGCCAAGCTGCCTTCCTTCGTAAGCATACCGATCTCGTCTCCGACACCTTCTTTAGCTCCATTCCAGGTCCTCTCTACTGGCCGACGTTCGTGGTGGCCGTGCTTGCGTCCATCGTGGCCAGCCAAGCCATGATCTCTGGCACCTTCTCCATCATCCAACAGTCCCTCTCCTATGGCTGTTTCCCTAGAGTAAAAGTTGTTCATACTTCTTCCAAGTATGAGGGCCAAGTTTACATACCTGAAGTTAACTATCTTCTTATGTTGGCTTGTCTTGGAGTCACTCTAGGGTTTAAAGATACAACACGAATAGGGAACGCTTATGGCATTGCAGTGGTGTTTGTAATGGCACTCACTTCAAGTTTCTTAGTGCTCATCATGATCATGATATGGAAATCTCACATACTTATCATAATTTCCTATGTTCTCACCATTGGCTTATTAGAACTTTTCTATCTAAGTTCAGTCCTTTACAAGTTTGATCAAGGTGGCTATCTTCCTTTAGCTTTTGCTGGATTTTTAATGACAATAATGTACATTTGGAATGATGTTCATAGAAGAAAATACTACTATGAACTTGAACACAAGATTTCTCCTCAAAAGCTCAAGGACATTGCTTCTCTCACAACTCTCAATCGTGCCCCTGGCCTTGCCTTGTTCTACTCTGAACTTGTCCAAGGCATTCCTCCAATCTTCAAGCATTATCTATCCAACATTCCCACTCTCCAAAGGGTCCTTGTCTTCGTATCGTTCAAGTCCCTCCCGATAAGTAAAGTCCCGATGGAAGAGCGGTTTCTATTTCGACGAGTTGAACCCGATGACCTTAACGTGTTTCGATGCGTGGTAAGATACGGTTATAGAGATATCATCCACGAGCAAGAGTCGTTCGAGAGAGTGCTGGTGGAGAGGTTGAAAATGTTTATAGAGGAAGAGTCGTGGAAGTTGCAAAACGACAACAATGATGATAGAAGGAGGAGAACAAGAGAGGAGATAGAGGTGGTTGATAGGGCTTGGAGAGATGGAATTGTTCACTTGATTGGACAAAACGAGGTTGTGGCAAGTAAAGGGTCAGGGTTAGCAAAAAGGGTTTTGATCAATTATGCTTATAATGCATTGAGGAGAAATTTGAGACAAAGTGAAGAGGTCTTTTACATCCCTAGAAAACGAATGCTCAAAGTGGGAATGACTTATGAGCTTTAG 2253 45.41 MEVDRTAENDHFPDFQESSDDSTPDLPERKLRRNDSLDVESGTVSGAGAHGHKAAATASWGVILHLAFQSVGIVYGDIGTSPLYVYASTFTDGIKHNDDVLGVLSLILYTLTLIPLLKYVFFVLQANDNGEGGTFALYSLLCRYAKIGLIPSQQVEDQEVSNFQVDLPSGRLKMASCLKSKLENTTAAKIFLLFATMLGTSMVIGDGVLTPSISVLSAVGGIKNATSTMTQDKIVWISAAILVCLFMVQGFGTHKVGYSFAPIICIWFALIAGIGFYNFLKFDPAVIKAVNPKYIFDYFKRNKKDAWISLGGVVLAITGTEALFADVGHFTVMSIRLSMCCVAYPALVSAYVGQAAFLRKHTDLVSDTFFSSIPGPLYWPTFVVAVLASIVASQAMISGTFSIIQQSLSYGCFPRVKVVHTSSKYEGQVYIPEVNYLLMLACLGVTLGFKDTTRIGNAYGIAVVFVMALTSSFLVLIMIMIWKSHILIIISYVLTIGLLELFYLSSVLYKFDQGGYLPLAFAGFLMTIMYIWNDVHRRKYYYELEHKISPQKLKDIASLTTLNRAPGLALFYSELVQGIPPIFKHYLSNIPTLQRVLVFVSFKSLPISKVPMEERFLFRRVEPDDLNVFRCVVRYGYRDIIHEQESFERVLVERLKMFIEEESWKLQNDNNDDRRRRTREEIEVVDRAWRDGIVHLIGQNEVVASKGSGLAKRVLINYAYNALRRNLRQSEEVFYIPRKRMLKVGMTYEL 750
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5454313 5461653 + CrPI670011_09g005800.1 Cre09g0580 507248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0580 750 MobiDBLite consensus disorder prediction 1 37 - -
Cre09g0580 750 NCBIfam potassium uptake protein 66 749 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cre09g0580 750 MobiDBLite consensus disorder prediction 1 49 - -
Cre09g0580 750 Pfam K+ potassium transporter C-terminal domain 566 750 IPR053952 -
Cre09g0580 750 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 50 749 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cre09g0580 750 Pfam K+ potassium transporter integral membrane domain 66 552 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g1568 Cre-Chr7:31141401 Cre09g0580 Cre-Chr9:5454313 2.10E-223 dispersed
Cre09g0580 Cre-Chr9:5454313 Cre10g1217 Cre-Chr10:24847580 4.40E-300 dispersed
Cre09g0579 Cre-Chr9:5436441 Cre09g0580 Cre-Chr9:5454313 7.50E-292 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0580 K03549 - csv:101213493 1355.89