Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0631 ATGTCCCTTTCTCCCCATCTTTTGCTCCTTCTTCTCACTATAGCATCCCTTTCTGCCGCCGCCGACGCCGTTGAATGCCCTCTCAATTTCACCGTCCTTCGCCAGTTCTCCCAGGGCTCCGCCGTTTCCCGCCCCGATTTCTCCGACGAATGTCAATATATCCGCCTCGGTCTCCGCCTCGTCCTCTCGCAGTACCTCAAACTCACCGGCTCCTTCTTGCCCCCGGTGAACTCTTCCGATTCATGCTGGAATTCTTACCAATCGATAGTGAATGTCACATGGCCGAATTTCGACATTCGGAGCTCTTGCGGGTTTCAAACCGGGTGGATCTCACAGGGCTGTATGAACATCAGGACCAAATCCGAGTTCGAGAGAATCGTTCCTAAATCGGCCCTCGATGGTGTTGTTGCGAACTGTAATCAATCGCTTGAGAATGGTTCCCCCTGTGCCTCGTGCACGACCAGGCTCGCGATCGTTCAGGCCTCGTTCTTGACCGGTCCGTCGATCGGCAATGTCACCGATTGCCCCGCATATCCGTCGATCTACGTGGCGGCGTTTGTGAATCAGTTCGGACCGACCGATTGGGGAACTGCCAAATGCTTATTCTCGCTCCATCCCCTTTCGTCGGGGGATTCGAGGAGCAAGAAGCGGAATACGGTGGTGTTAGTGGTTTTAATTTGCTGTGGCGTTGCGGCAGCAGCGGTGGCGGTTGCAGGCGGGTTGTTTTTCTGGCGGAAACAGGGGAAAGTGAAGAAGAATGATAGAATTGGTAGAGTTGAGACAGGGTTGGGTTCTGGATTGGAGTCGATAAGTGCAAGCACTACTTTGGTGAAGTTCACATTCGATGAAATCAAGAGGGCGACAAGGAATTTTTCTAGAGATAACATAATTGGGAGAGGGGGTTATGGAAATGTGTATAAAGGGGTTCTATCAGATGATTCTGAAGTTGCATTGAAGAGATTTAAGAACTGTTCTGCAGCAGGGGACGCCATTTTTGCTCATGAAGTGGAGGTAATTTCAAGTGTTAGGCATGTTAATCTTGTTGCTTTAAGAGGATATTGTATTGCAACTACACCAATGGAGGGTCACCAGAGAATAATTGTGTGTGATCTGATGAAGAATGGGAGTCTTTATGACCATTTGTTTGGGTTTTCAGATAAGAGGTTGAGTTGGCCAATTAGGCAAAAGATTGCTCTTGGCACAGCTAGGGGATTGGCTTATCTGCATTATGGAGCTCAGCCTGCCATTATCCATAGAGATATCAAAGCCAGCAACATTCTTTTGGATGAAAACTTTGATCCCAAGGTGGCTGACTTTGGTTTAGCCAAGTTCACTCCAGAAGGAATGACTCATTTGAGCACAAGAGTTGCTGGAACTATGGGGTATGTGGCGCCCGAGTACGCTTTATACGGCCAGTTGACGGAGAGGAGTGATGTGTATAGCTTTGGAGTTGTTTTGCTCGAGCTTTTGAGTGGGAGGAAGGCACTCGGGGTGAGGAGCCATGACAGCCAGCCCTTTCTAGTGACTGATTGGGCTTGGTCTTTGGTTAGGGAACAAAAAGCAATGGATGTTATTGAAGAAGGCATGCCAGAGCTGGGTTCTCCAGACGTTGTTGAGAAGTATGTATTGATTGCTGTTCTTTGTTCCCATCCCCAGCTCTATGCCAGGCCAACAATGGATCAAGTTGTGAAAATGTTGGAAACTGAGCTCTCTGTTCCTTCAATCCCGGAGAGACCCATCCCTCTAGTTGCTGATATTGATGAAATTGAGAGATCTATGAGTAGTAGTGGTTCTGCTCAGCATTCTGGTTCAGTTGGCTTTCATAGTTTCACATTACAAAATGACCATAGACTGAAGCACGACCTACATTCTTACGAAAAGATGGTTGTGAGGAATCAGCTCGAGAAGGGGCTTGCATCTGATTGCCTAGTTGGTGAGACAACTTACCAATACCGAGGGATGATCGGTTGTCGGTCTTCGAAGATGATCAACCATACTGGGATTGAAAACACGACTTAG 2019 48.09 MSLSPHLLLLLLTIASLSAAADAVECPLNFTVLRQFSQGSAVSRPDFSDECQYIRLGLRLVLSQYLKLTGSFLPPVNSSDSCWNSYQSIVNVTWPNFDIRSSCGFQTGWISQGCMNIRTKSEFERIVPKSALDGVVANCNQSLENGSPCASCTTRLAIVQASFLTGPSIGNVTDCPAYPSIYVAAFVNQFGPTDWGTAKCLFSLHPLSSGDSRSKKRNTVVLVVLICCGVAAAAVAVAGGLFFWRKQGKVKKNDRIGRVETGLGSGLESISASTTLVKFTFDEIKRATRNFSRDNIIGRGGYGNVYKGVLSDDSEVALKRFKNCSAAGDAIFAHEVEVISSVRHVNLVALRGYCIATTPMEGHQRIIVCDLMKNGSLYDHLFGFSDKRLSWPIRQKIALGTARGLAYLHYGAQPAIIHRDIKASNILLDENFDPKVADFGLAKFTPEGMTHLSTRVAGTMGYVAPEYALYGQLTERSDVYSFGVVLLELLSGRKALGVRSHDSQPFLVTDWAWSLVREQKAMDVIEEGMPELGSPDVVEKYVLIAVLCSHPQLYARPTMDQVVKMLETELSVPSIPERPIPLVADIDEIERSMSSSGSAQHSGSVGFHSFTLQNDHRLKHDLHSYEKMVVRNQLEKGLASDCLVGETTYQYRGMIGCRSSKMINHTGIENTT 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5960346 5962509 + CrPI670011_09g006310.1 Cre09g0631 507299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0631 672 ProSiteProfiles Protein kinase domain profile. 291 570 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g0631 672 SMART serkin_6 291 566 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g0631 672 ProSitePatterns Protein kinases ATP-binding region signature. 297 319 IPR017441 GO:0005524(InterPro)
Cre09g0631 672 Pfam SPARK 23 175 IPR043891 -
Cre09g0631 672 SUPERFAMILY Protein kinase-like (PK-like) 268 567 IPR011009 -
Cre09g0631 672 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 372 574 - -
Cre09g0631 672 Pfam Protein kinase domain 293 511 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g0631 672 CDD STKc_IRAK 297 567 - -
Cre09g0631 672 Gene3D Transferase(Phosphotransferase) domain 1 372 581 - -
Cre09g0631 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre09g0631 672 Gene3D Phosphorylase Kinase; domain 1 263 370 - -
Cre09g0631 672 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 252 370 - -
Cre09g0631 672 PANTHER OS01G0750732 PROTEIN 49 596 IPR050885 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g1144 Cre-Chr5:10955273 Cre09g0631 Cre-Chr9:5960346 2.20E-99 dispersed
Cre09g0631 Cre-Chr9:5960346 Cre10g2306 Cre-Chr10:37307713 3.30E-73 dispersed
Cre09g0631 Cre-Chr9:5960346 Cre11g0731 Cre-Chr11:4424489 2.70E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64392 PF00069 Pkinase 9.80E-41 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0631 - - - 0.0