Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0639 ATGTTTTGCTGCAGCAATCAATGGAGTCGAGTACAGGCTTCGGAATCTGAAATTGGAATCTGCTATTGCTTGTCGAGGATGCTTCCGTGGGGAGGTCTTAGTTGCTGTTTGAGTGCAGCTGCTCTTTATCTTCTTGGAAGGAGTAGTGGCCGGGATGCGGAGTTACTGAAATCTGCCACGCGGGTCAATCAGTTGAAGGAATTGGCTCAATTGCTTGAGGCAGAATGTCTATTACCTCTGGTTGTTGCAATTTCTGGAAGAGTTAGCTCTGATACACCAATAAATTGCGAATTTAGTGGTTTAAGGGGTGTAATTGTGGAGGAAACGGCAGAACAACACTTTTTAAAGCACAACGATGCAGGATCATGGATTCAGGATTCTGCACTGATGCTCTCCATGAGTAAAGAAGTTCCTTGGTATCTGGATGATGGGACTGGTCGTGCATTTGTGGTAGGAGCTCGAAATGCCACAAATTTTATATTACCAGTAGTGAGTGAGGTTTTTGAAGAGTCTGGCAGATCCCTTATGCGTGGCACTTTAGATTATCTCCAAGGTCTTAAGATGCTTGGAGTTAAGCGAATAGAACGCGTTCTACCTACTGGTACTTCCTTGACTGTTGTTGGTGAGGCTGCCAAAGATGACATTGGTACCATCAGAATTCAACGTCCACACAAAGGACCATTTTATGTCTCCCCAAAAACTATCGATCAACTCATAAGCAATCTTGGGAAGTGGGCCAGGTGGTACAAGTATGCTTCCATGGGTTTGGGTATATTTGGTTTGTATCTGGTCACAAAGCATGCTATTCTTTATCTCATGGAGAGAAGGCGTCGCTGGGAATTGCAGAAAAGGGTCCTTGCTGCAGCTGCCAAAAGATCAAGCCAAGAAAATGAAGGGGAAAATGAAAAGGCCAGCAATGGAACAGATGGTACAAAGAGAGACCGGTCAATGCCAGATCTTTGTGTAATATGTCTCGAGAGAGACTACAATGCTGTTTTTGTCCCGTGCGGCCATATGTGCTGCTGTGTAGCATGTTGTTCACATTTAACAAACTGTCCACTCTGTCGTAGACGAATTGAGCTGCATTTGTCACATGTTGCAAGAATCTCGCCAGCCAATTATATGTTGCAACCTCCCCGGATAGCAATTGAAAGGTTCTTTGAGAAG 1167 44.56 MFCCSNQWSRVQASESEIGICYCLSRMLPWGGLSCCLSAAALYLLGRSSGRDAELLKSATRVNQLKELAQLLEAECLLPLVVAISGRVSSDTPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGTGRAFVVGARNATNFILPVVSEVFEESGRSLMRGTLDYLQGLKMLGVKRIERVLPTGTSLTVVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLISNLGKWARWYKYASMGLGIFGLYLVTKHAILYLMERRRRWELQKRVLAAAAKRSSQENEGENEKASNGTDGTKRDRSMPDLCVICLERDYNAVFVPCGHMCCCVACCSHLTNCPLCRRRIELHLSHVARISPANYMLQPPRIAIERFFEK 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6055424 6065353 - CrPI670011_09g006390.1 Cre09g0639 507307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0639 389 Pfam E3 Ubiquitin ligase 111 261 IPR022170 GO:0004842(InterPro)|GO:0006996(InterPro)|GO:0016567(InterPro)
Cre09g0639 389 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 288 364 IPR013083 -
Cre09g0639 389 MobiDBLite consensus disorder prediction 295 312 - -
Cre09g0639 389 ProSiteProfiles Zinc finger RING-type profile. 321 356 IPR001841 -
Cre09g0639 389 MobiDBLite consensus disorder prediction 292 312 - -
Cre09g0639 389 SUPERFAMILY RING/U-box 320 363 - -
Cre09g0639 389 PANTHER - 27 361 IPR044231 GO:0004842(InterPro)|GO:0016567(InterPro)
Cre09g0639 389 Pfam Zinc finger, C3HC4 type (RING finger) 319 360 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0639 K15688 - csv:101218196 634.795