Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g0707 | ATGGCGAACAATCATTCCGATACTCCGGCTGATGATTTCCTCGAGCAGATTCTTGGGATTTCCCCTTTTGGTTCGTCGGACCAAGGGTTAACTGGAACTGACGGCGGATTGGCCGGAGCTGCTGCTGCTGCTGCTGCGGCAGCGGCGGCGGCTCAGGGTCAGGCTCCGATGATGCTTCAGCTTAGCTCCGGCGACGGTGGTGGTCATATCGCTACGATTGGGAGTGGTAGTGTCGGTGGAGCTGGGTTTCATGGCGGACCCCCTTTTCCTCTGGGGTTGAGCTTGGACCAAGGGAAGAGTGGGTTTCTTAAGGCTGAGGAAGCCTCTGGAAGTGGAAAGCGGTATTGTGGTGATGTTGTTGATGTTCGAGCTTCGTCTGTAAAAAATGTTTTTCAAGGCCAACAAATGCATGCTACTATGGGTGCAGCCCCACATCCACCAGCAATGCGCCCTAGGGTACGTGCAAGACGAGGACAGGCGACTGATCCACATAGCATTGCAGAGCGGTTACGAAGAGAAAGGATTGCAGAGAGAATTAGGGCTTTGCAGGAGCTTGTTCCGAGTGTCAATAAGACGGATAGAGCTGCAATGCTCGATGAAATAGTGGACTACGTAAAGTTCCTACGTCTCCAAGTGAAGGTTCTGAGCATGAGTAGATTGGGTGGAGCTGGTGCTGTGGCACCACTTGTAACGGATATTCCACTATCATCAGTTGAGGAAGAAGGAAGTGAAGGTGGTAGGAACCAACCAGCATGGGAGAAGTGGTCGAACGATGGTACAGAGAGACAAGTTGCTAAACTCATGGAAGAAAATGTGGGAGCCGCAATGCAATTCCTTCAATCAAAGGCACTCTGCATCATGCCCATCTCGTTGGCTTCAGCGATTTATCACACGCAACCACCTGATAGCTCGAGCGTTGTGAAGCCAGAGAGTAACCCTCCTCCATAG | 948 | 51.79 | MANNHSDTPADDFLEQILGISPFGSSDQGLTGTDGGLAGAAAAAAAAAAAAQGQAPMMLQLSSGDGGGHIATIGSGSVGGAGFHGGPPFPLGLSLDQGKSGFLKAEEASGSGKRYCGDVVDVRASSVKNVFQGQQMHATMGAAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSEGGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYHTQPPDSSSVVKPESNPPP | 315 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 6830245 | 6833382 | + | CrPI670011_09g007070.1 | Cre09g0707 | 507375 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g0707 | 315 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 159 | 208 | IPR011598 | GO:0046983(InterPro) | |
Cre09g0707 | 315 | SMART | finulus | 165 | 214 | IPR011598 | GO:0046983(InterPro) | |
Cre09g0707 | 315 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 157 | 218 | IPR036638 | GO:0046983(InterPro) | |
Cre09g0707 | 315 | Gene3D | - | 154 | 216 | IPR036638 | GO:0046983(InterPro) | |
Cre09g0707 | 315 | FunFam | Basic helix-loop-helix transcription factor | 154 | 216 | - | - | |
Cre09g0707 | 315 | Pfam | Helix-loop-helix DNA-binding domain | 164 | 209 | IPR011598 | GO:0046983(InterPro) | |
Cre09g0707 | 315 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 100 | 294 | IPR045843 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER) | |
Cre09g0707 | 315 | MobiDBLite | consensus disorder prediction | 140 | 163 | - | - | |
Cre09g0707 | 315 | MobiDBLite | consensus disorder prediction | 239 | 258 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre02g2023 | Cre-Chr2:33718261 | Cre09g0707 | Cre-Chr9:6830245 | 2.00E-42 | dispersed | |
Cre06g2093 | Cre-Chr6:28704313 | Cre09g0707 | Cre-Chr9:6830245 | 1.70E-46 | dispersed | |
Cre07g0390 | Cre-Chr7:1632252 | Cre09g0707 | Cre-Chr9:6830245 | 3.40E-17 | dispersed | |
Cre09g0707 | Cre-Chr9:6830245 | Cre09g0809 | Cre-Chr9:8075744 | 7.30E-15 | dispersed | |
Cre09g0707 | Cre-Chr9:6830245 | Cre03g1905 | Cre-Chr3:36090427 | 1.80E-53 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54320 | PF00010 | HLH | 1.20E-07 | No_clan | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g0707 | - | - | - | 0.0 |