Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g0718 | ATGGATGGATGGATGATGTGTGCCTTTTATTCTTTTGGGAAGATGATGGAAGAGGTTGAAGAAGCTAATAGGGAAGCTGTTGAGAGTTGTCATAAAGTGTTGAATCTCTTGACTGTGGCTTCCTCGTCTCAAGATCAGTTGAAGCTTAGGAGTCGTTTAATGGCGGAAACTGGAGACGCTGTGTTTAAGTTTAGGAAAGTTTTGTGTCTTCTTGATTCTTCTGGGTTGGGTCATGCAAGGGTCAGGAAAAAGAAGGTCAAGAACTTTTTGTTTAATTCCTCTTCTTCCCCTTTTCCTCTTCCCCAATCTTTGTTCTTAGAAACTTCTTCCCCTAATTGCAGAATGGACCTTCTCCAGGGCAGGAATTTGCAGATGGGTCCTCTTTGTTTGGGGAACCCATCTTTGGAATTGAACTCTAATGCCAAAAGTTGTTCAACCCAACAAATACAATCTCAATCTGCTGCTCTTTATCATCATCATCATCATCATCATCACTTGCTTCAGAACAGGGTGTTGTTGAACAATAATCCTAATCCTAATCCTAATCCTCCACAGCCTGAAATGATGTATCTTAGGAGCAATAATGGCATTAACTTAAATTTTGATAGCTCTAGTTGCACACAACACACAATGTCATCCACTAGGTCGTTTATATCTTCCTTGAGCATTGATGGGAGTGTGGCTAGCTTGGATGGGAGTGCCTTTCATTTGATCGGGGCACCCCGGTCTTCCGATCAGAATTCTCATCATAAGAGGAAGTGCAGTGGGAGAGGGGAAGATGGGAGTGTTAAATGTGGAAGCAGTGGGAGATGTCACTGCTCAAAAAAGAGGAAACATAGAGTAAAGCGATCAATTAAGGTGCCCGCGATAAGTAACAAGCTTGCAGATATCCCTCCTGATGATTATTCATGGAGGAAATATGGCCAAAAGCCAATCAAGGGTTCACCTCACCCAAGAGGATACTATAAGTGCAGCAGCATGAGAGGCTGTCCAGCGAGGAAGCACGTCGAGCGGTGTCTCGAGGAACCTTCCATGCTCATTGTTACATATGAAGGTGAACACAACCATCCTAGAATACCTTCTCAACCTGCAAATACTTGA | 1101 | 43.23 | MDGWMMCAFYSFGKMMEEVEEANREAVESCHKVLNLLTVASSSQDQLKLRSRLMAETGDAVFKFRKVLCLLDSSGLGHARVRKKKVKNFLFNSSSSPFPLPQSLFLETSSPNCRMDLLQGRNLQMGPLCLGNPSLELNSNAKSCSTQQIQSQSAALYHHHHHHHHLLQNRVLLNNNPNPNPNPPQPEMMYLRSNNGINLNFDSSSCTQHTMSSTRSFISSLSIDGSVASLDGSAFHLIGAPRSSDQNSHHKRKCSGRGEDGSVKCGSSGRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPRIPSQPANT | 366 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 6971355 | 6973354 | - | CrPI670011_09g007180.1 | Cre09g0718 | 507386 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g0718 | 366 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 15 | 362 | IPR044810 | GO:0003700(InterPro) | |
Cre09g0718 | 366 | Gene3D | WRKY domain | 282 | 360 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre09g0718 | 366 | MobiDBLite | consensus disorder prediction | 239 | 267 | - | - | |
Cre09g0718 | 366 | Pfam | WRKY DNA -binding domain | 300 | 357 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre09g0718 | 366 | SUPERFAMILY | WRKY DNA-binding domain | 296 | 358 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre09g0718 | 366 | FunFam | WRKY transcription factor 65 | 282 | 359 | - | - | |
Cre09g0718 | 366 | SMART | WRKY_cls | 298 | 358 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre09g0718 | 366 | Pfam | Plant zinc cluster domain | 251 | 296 | IPR018872 | - | |
Cre09g0718 | 366 | ProSiteProfiles | WRKY domain profile. | 293 | 359 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cre09g0718 | 366 | MobiDBLite | consensus disorder prediction | 245 | 259 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre05g2205 | Cre-Chr5:33756245 | Cre09g0718 | Cre-Chr9:6971355 | 1.80E-47 | dispersed | |
Cre09g0718 | Cre-Chr9:6971355 | Cre10g1308 | Cre-Chr10:26373199 | 2.50E-22 | dispersed | |
Cre07g0436 | Cre-Chr7:2048638 | Cre09g0718 | Cre-Chr9:6971355 | 3.90E-99 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54323 | PF03106 | WRKY | 3.70E-26 | CL0274 | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g0718 | - | - | - | 0.0 |