Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g0757 | ATGGATTCGGCGAGGAGTTGGTTTAATAAGCTTCAGCCAAGAGATAGGTTGAGGGGTTCTACGAAGAAGAAGGATAATAGTATGGGAGAGAATGAGGATGGTACTGCTACTGATCAAACGGATGAAGAAGCGCTTTCTAATATTACTAAGCAGAAGGTTGCTGCGGCAAAGCAGTATATTGAGAATCATTACAAGGAGCAAATGAAGAATCTGCAGGAGAGAAAGGAAAGACGAAATATATTGGAAAAGAAGTTGGCTGATGCTGATGTTTCTGAAGAAGATCAAAACAATTTACTTAAGTTCCTAGAGAAGAAGGAAACTGAATACATGCGCCTCCAAAGGCACAAAATGGGTGTTGATGATTTCGATTTACTAACAATTATTGGCAAAGGTGCTTTTGGGGAGGTTCGTGTTTGTAGAGAGAAGACTACAGGTCAGGTGTATGCTATGAAAAAGCTTAAAAAATCAGAGATGCTTCGAAGGGGCCAGGTGGAGCATGTGAGAGCTGAAAGAAATCTGCTTGCTGAAGTAGACAGCAACTGTATTGTGAAACTCTATTGTTCTTTTCAAGATGATGAGTTTCTTTATCTTATTATGGAGTACCTACCTGGTGGAGATATGATGACTTTATTGATGAGAAAGGATACTTTGACTGAAGATGAAGCAAGGTTTTACGTTGGAGAGATAGTTTTGGCTATTGAATCTATTCATAAGCACAATTACATTCATAGAGATATTAAGCCTGACAACTTGCTGCTTGATAAATTTGGGCACTTGAGACTCTCAGACTTTGGACTATGCAAACCGTTAGATTGCAGTACACTCCAAGAACAAGATTTTGATGTAGGGAGTGTCCGTAATGGAGCTGGACAAAGTGATGAGCGCAATGCAGCTCCCCGTACTCAACAAGAGCAACTACAACATTGGCAGAAGAATCGAAGAATGCTTGCTTATTCAACAGTTGGAACACCAGATTATATTGCTCCAGAGGTTTTGTTGAAGAAAGGTTATGGCATGGAATGTGACTGGTGGTCACTTGGAGCTATTATGTATGAAATGCTTGTTGGCTACCCACCTTTTTACTCTGATGATCCAATGTCGACATGTCGGAAGATTGTGAACTGGAGAACTCATTTGAAGTTCCCTGACGAGGCAAAGCTGTCTCCCTTGGCAAAAGATCTCATCAGCAGACTACTATGCAATGTTAACCAGAGGCTTGGTACAAATGGCGCAGATGAAATTAAGGTTCATCCGTGGTTTGAAGGTACTGAATGGGATAGGCTATACCAAATGGAAGCTGCATTTGTTCCTGAGGTTAAAGATGAGCTAGACACTCAAAATTTCGAAAAGTTTGAAGAGTCTGACTCGCAAAGCAGTACTTCATCTAAAACTGGTCCATGGAGAAAGATGCTTTCATCGAAGGACATCAACTTTGTTGGATATACTTACAAGAACTTCGAAATTGTCAACGATTATCAATTACCTGGGATGGCTGAATTGAAGAAAAAATGCAGCAAACCCAAAAGACCGTCAATCAAGTCACTCTTTGATGGCGAGTCGGAGGCAGCAGACACATCTGATACACACACACCTACTCATAGTCAGCAGAACACTGAAGGTAGCTTTTCGAACTCAACAACATCTCCTAAACTGGATGAAGTTGAAATGGGGAAAGAGTCGATGTAA | 1686 | 40.87 | MDSARSWFNKLQPRDRLRGSTKKKDNSMGENEDGTATDQTDEEALSNITKQKVAAAKQYIENHYKEQMKNLQERKERRNILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFDLLTIIGKGAFGEVRVCREKTTGQVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGEIVLAIESIHKHNYIHRDIKPDNLLLDKFGHLRLSDFGLCKPLDCSTLQEQDFDVGSVRNGAGQSDERNAAPRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPDEAKLSPLAKDLISRLLCNVNQRLGTNGADEIKVHPWFEGTEWDRLYQMEAAFVPEVKDELDTQNFEKFEESDSQSSTSSKTGPWRKMLSSKDINFVGYTYKNFEIVNDYQLPGMAELKKKCSKPKRPSIKSLFDGESEAADTSDTHTPTHSQQNTEGSFSNSTTSPKLDEVEMGKESM | 561 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 7413606 | 7422252 | + | CrPI670011_09g007570.1 | Cre09g0757 | 507425 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g0757 | 561 | Gene3D | Transferase(Phosphotransferase) domain 1 | 316 | 438 | - | - | |
Cre09g0757 | 561 | Gene3D | Transferase(Phosphotransferase) domain 1 | 206 | 271 | - | - | |
Cre09g0757 | 561 | Pfam | Protein kinase C terminal domain | 439 | 483 | IPR017892 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g0757 | 561 | ProSiteProfiles | Protein kinase domain profile. | 122 | 420 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g0757 | 561 | CDD | MobB_NDR_LATS-like | 56 | 117 | - | - | |
Cre09g0757 | 561 | ProSitePatterns | Protein kinases ATP-binding region signature. | 128 | 151 | IPR017441 | GO:0005524(InterPro) | |
Cre09g0757 | 561 | Coils | Coil | 64 | 84 | - | - | |
Cre09g0757 | 561 | Pfam | Protein kinase domain | 317 | 420 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g0757 | 561 | Pfam | Protein kinase domain | 124 | 273 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g0757 | 561 | FunFam | Non-specific serine/threonine protein kinase | 319 | 438 | - | - | |
Cre09g0757 | 561 | SMART | pkinase_C_6 | 421 | 485 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g0757 | 561 | MobiDBLite | consensus disorder prediction | 283 | 302 | - | - | |
Cre09g0757 | 561 | SUPERFAMILY | Protein kinase-like (PK-like) | 95 | 473 | IPR011009 | - | |
Cre09g0757 | 561 | SMART | serkin_6 | 122 | 420 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g0757 | 561 | MobiDBLite | consensus disorder prediction | 527 | 551 | - | - | |
Cre09g0757 | 561 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 35 | 488 | IPR050236 | GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER) | |
Cre09g0757 | 561 | CDD | STKc_NDR_like | 120 | 484 | - | - | |
Cre09g0757 | 561 | MobiDBLite | consensus disorder prediction | 503 | 561 | - | - | |
Cre09g0757 | 561 | FunFam | Non-specific serine/threonine protein kinase | 206 | 273 | - | - | |
Cre09g0757 | 561 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 421 | 493 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g0757 | 561 | Gene3D | Phosphorylase Kinase; domain 1 | 439 | 449 | - | - | |
Cre09g0757 | 561 | Gene3D | Phosphorylase Kinase; domain 1 | 120 | 205 | - | - | |
Cre09g0757 | 561 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
Cre09g0757 | 561 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 241 | 253 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre09g0757 | 561 | FunFam | Non-specific serine/threonine protein kinase | 93 | 205 | - | - | |
Cre09g0757 | 561 | MobiDBLite | consensus disorder prediction | 503 | 526 | - | - | |
Cre09g0757 | 561 | MobiDBLite | consensus disorder prediction | 9 | 31 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre06g1468 | Cre-Chr6:9225198 | Cre09g0757 | Cre-Chr9:7413606 | 5.60E-245 | dispersed | |
Cre08g1541 | Cre-Chr8:28032232 | Cre09g0757 | Cre-Chr9:7413606 | 4.90E-173 | dispersed | |
Cre09g0757 | Cre-Chr9:7413606 | Cre09g2005 | Cre-Chr9:39116551 | 1.90E-69 | dispersed | |
Cre09g0757 | Cre-Chr9:7413606 | Cre03g1807 | Cre-Chr3:34920700 | 2.50E-183 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64396 | PF00069 | Pkinase | 1.10E-63 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g0757 | K08790 | - | csv:101221720 | 1064.68 |