Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0757 ATGGATTCGGCGAGGAGTTGGTTTAATAAGCTTCAGCCAAGAGATAGGTTGAGGGGTTCTACGAAGAAGAAGGATAATAGTATGGGAGAGAATGAGGATGGTACTGCTACTGATCAAACGGATGAAGAAGCGCTTTCTAATATTACTAAGCAGAAGGTTGCTGCGGCAAAGCAGTATATTGAGAATCATTACAAGGAGCAAATGAAGAATCTGCAGGAGAGAAAGGAAAGACGAAATATATTGGAAAAGAAGTTGGCTGATGCTGATGTTTCTGAAGAAGATCAAAACAATTTACTTAAGTTCCTAGAGAAGAAGGAAACTGAATACATGCGCCTCCAAAGGCACAAAATGGGTGTTGATGATTTCGATTTACTAACAATTATTGGCAAAGGTGCTTTTGGGGAGGTTCGTGTTTGTAGAGAGAAGACTACAGGTCAGGTGTATGCTATGAAAAAGCTTAAAAAATCAGAGATGCTTCGAAGGGGCCAGGTGGAGCATGTGAGAGCTGAAAGAAATCTGCTTGCTGAAGTAGACAGCAACTGTATTGTGAAACTCTATTGTTCTTTTCAAGATGATGAGTTTCTTTATCTTATTATGGAGTACCTACCTGGTGGAGATATGATGACTTTATTGATGAGAAAGGATACTTTGACTGAAGATGAAGCAAGGTTTTACGTTGGAGAGATAGTTTTGGCTATTGAATCTATTCATAAGCACAATTACATTCATAGAGATATTAAGCCTGACAACTTGCTGCTTGATAAATTTGGGCACTTGAGACTCTCAGACTTTGGACTATGCAAACCGTTAGATTGCAGTACACTCCAAGAACAAGATTTTGATGTAGGGAGTGTCCGTAATGGAGCTGGACAAAGTGATGAGCGCAATGCAGCTCCCCGTACTCAACAAGAGCAACTACAACATTGGCAGAAGAATCGAAGAATGCTTGCTTATTCAACAGTTGGAACACCAGATTATATTGCTCCAGAGGTTTTGTTGAAGAAAGGTTATGGCATGGAATGTGACTGGTGGTCACTTGGAGCTATTATGTATGAAATGCTTGTTGGCTACCCACCTTTTTACTCTGATGATCCAATGTCGACATGTCGGAAGATTGTGAACTGGAGAACTCATTTGAAGTTCCCTGACGAGGCAAAGCTGTCTCCCTTGGCAAAAGATCTCATCAGCAGACTACTATGCAATGTTAACCAGAGGCTTGGTACAAATGGCGCAGATGAAATTAAGGTTCATCCGTGGTTTGAAGGTACTGAATGGGATAGGCTATACCAAATGGAAGCTGCATTTGTTCCTGAGGTTAAAGATGAGCTAGACACTCAAAATTTCGAAAAGTTTGAAGAGTCTGACTCGCAAAGCAGTACTTCATCTAAAACTGGTCCATGGAGAAAGATGCTTTCATCGAAGGACATCAACTTTGTTGGATATACTTACAAGAACTTCGAAATTGTCAACGATTATCAATTACCTGGGATGGCTGAATTGAAGAAAAAATGCAGCAAACCCAAAAGACCGTCAATCAAGTCACTCTTTGATGGCGAGTCGGAGGCAGCAGACACATCTGATACACACACACCTACTCATAGTCAGCAGAACACTGAAGGTAGCTTTTCGAACTCAACAACATCTCCTAAACTGGATGAAGTTGAAATGGGGAAAGAGTCGATGTAA 1686 40.87 MDSARSWFNKLQPRDRLRGSTKKKDNSMGENEDGTATDQTDEEALSNITKQKVAAAKQYIENHYKEQMKNLQERKERRNILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFDLLTIIGKGAFGEVRVCREKTTGQVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGEIVLAIESIHKHNYIHRDIKPDNLLLDKFGHLRLSDFGLCKPLDCSTLQEQDFDVGSVRNGAGQSDERNAAPRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPDEAKLSPLAKDLISRLLCNVNQRLGTNGADEIKVHPWFEGTEWDRLYQMEAAFVPEVKDELDTQNFEKFEESDSQSSTSSKTGPWRKMLSSKDINFVGYTYKNFEIVNDYQLPGMAELKKKCSKPKRPSIKSLFDGESEAADTSDTHTPTHSQQNTEGSFSNSTTSPKLDEVEMGKESM 561
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7413606 7422252 + CrPI670011_09g007570.1 Cre09g0757 507425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0757 561 Gene3D Transferase(Phosphotransferase) domain 1 316 438 - -
Cre09g0757 561 Gene3D Transferase(Phosphotransferase) domain 1 206 271 - -
Cre09g0757 561 Pfam Protein kinase C terminal domain 439 483 IPR017892 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g0757 561 ProSiteProfiles Protein kinase domain profile. 122 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g0757 561 CDD MobB_NDR_LATS-like 56 117 - -
Cre09g0757 561 ProSitePatterns Protein kinases ATP-binding region signature. 128 151 IPR017441 GO:0005524(InterPro)
Cre09g0757 561 Coils Coil 64 84 - -
Cre09g0757 561 Pfam Protein kinase domain 317 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g0757 561 Pfam Protein kinase domain 124 273 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g0757 561 FunFam Non-specific serine/threonine protein kinase 319 438 - -
Cre09g0757 561 SMART pkinase_C_6 421 485 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g0757 561 MobiDBLite consensus disorder prediction 283 302 - -
Cre09g0757 561 SUPERFAMILY Protein kinase-like (PK-like) 95 473 IPR011009 -
Cre09g0757 561 SMART serkin_6 122 420 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g0757 561 MobiDBLite consensus disorder prediction 527 551 - -
Cre09g0757 561 PANTHER SERINE/THREONINE-PROTEIN KINASE 35 488 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Cre09g0757 561 CDD STKc_NDR_like 120 484 - -
Cre09g0757 561 MobiDBLite consensus disorder prediction 503 561 - -
Cre09g0757 561 FunFam Non-specific serine/threonine protein kinase 206 273 - -
Cre09g0757 561 ProSiteProfiles AGC-kinase C-terminal domain profile. 421 493 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g0757 561 Gene3D Phosphorylase Kinase; domain 1 439 449 - -
Cre09g0757 561 Gene3D Phosphorylase Kinase; domain 1 120 205 - -
Cre09g0757 561 MobiDBLite consensus disorder prediction 1 45 - -
Cre09g0757 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre09g0757 561 FunFam Non-specific serine/threonine protein kinase 93 205 - -
Cre09g0757 561 MobiDBLite consensus disorder prediction 503 526 - -
Cre09g0757 561 MobiDBLite consensus disorder prediction 9 31 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre06g1468 Cre-Chr6:9225198 Cre09g0757 Cre-Chr9:7413606 5.60E-245 dispersed
Cre08g1541 Cre-Chr8:28032232 Cre09g0757 Cre-Chr9:7413606 4.90E-173 dispersed
Cre09g0757 Cre-Chr9:7413606 Cre09g2005 Cre-Chr9:39116551 1.90E-69 dispersed
Cre09g0757 Cre-Chr9:7413606 Cre03g1807 Cre-Chr3:34920700 2.50E-183 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64396 PF00069 Pkinase 1.10E-63 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0757 K08790 - csv:101221720 1064.68