Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g0763 | ATGGCAGCCTCTTATTCTTCTCCTTCTTCTCCTCCATGTGGAGCTTGCAAGTTTCTTAGAAGAAAGTGTGTCAATGGCTGCATCTTTGCTCCTTATTTCCGCCACGAGCTCGGCGCCTCCCAGTTCTCTGCCATCCACAAAGTTTTCGGTGCAAGCAATGCTTCCAAGCTTCTCGCTCACCTCCCAGTCTCCCACCGTTGCGAAGCGGCGGTGACGATCTCATACGAAGCTCAAGCAAGACTTCAAGATCCGATCTACGGTTGCGTATCTCATATTTTCGCTCTCCAGCAACAGGTTATGAATCTAAGGGCTCAAGTGGCTTATTTAAGAGAACAAGCAGCTCAAATCCTTCTCAACAACTACACTACAAGAAACCCTATTGAATTACCTTACGAAAAATCTTCAGTTTATTCCGACGACCCATTACTAGATCTTCAAAGTTGGCTTCTGGCGGAGAGCTGCAGCGCCGCCGCGCCGGAGTTTGAACCTGCAGCGGTGCCGTACTTTGAGATGAGCGTCGTCGATTCAAATCTCGCCGGAGATTTCTGTTGCTAA | 555 | 48.83 | MAASYSSPSSPPCGACKFLRRKCVNGCIFAPYFRHELGASQFSAIHKVFGASNASKLLAHLPVSHRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVMNLRAQVAYLREQAAQILLNNYTTRNPIELPYEKSSVYSDDPLLDLQSWLLAESCSAAAPEFEPAAVPYFEMSVVDSNLAGDFCC | 184 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 7479801 | 7480566 | - | CrPI670011_09g007630.1 | Cre09g0763 | 507431 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g0763 | 184 | Coils | Coil | 92 | 112 | - | - | |
Cre09g0763 | 184 | Pfam | Lateral organ boundaries (LOB) domain | 12 | 109 | IPR004883 | - | |
Cre09g0763 | 184 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 10 | 125 | - | GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER) | |
Cre09g0763 | 184 | ProSiteProfiles | LOB domain profile. | 11 | 113 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre07g0455 | Cre-Chr7:2314966 | Cre09g0763 | Cre-Chr9:7479801 | 1.60E-38 | dispersed | |
Cre07g0456 | Cre-Chr7:2324896 | Cre09g0763 | Cre-Chr9:7479801 | 5.80E-44 | dispersed | |
Cre07g0702 | Cre-Chr7:4940955 | Cre09g0763 | Cre-Chr9:7479801 | 2.30E-31 | dispersed | |
Cre09g0763 | Cre-Chr9:7479801 | Cre10g1714 | Cre-Chr10:31355825 | 1.70E-35 | dispersed | |
Cre09g0763 | Cre-Chr9:7479801 | Cre06g0810 | Cre-Chr6:1446945 | 5.60E-39 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54330 | PF03195 | LOB | 1.20E-34 | No_clan | Cre | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g0763 | K13945 | - | csv:101220863 | 321.242 |