Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0806 ATGGATGAAGATTTTGATATCCCTGCTGCCGCTGACATGAACGAGGACTTGGATCTTCCTGATGATACCATAGCTCTCAAGGTTGGGGAGGAGAAAGAAATTGGAAATCAAGGCTTGAAGAAGAAGCTTCTTAAAGAAGGTGAAGGATGGGTAACTCCTGAAAATGGCGATGAGGTTGAAGTTCACTATACTGGGACTTTGCTTGATGGGACTCAGTTTGATTCCAGCCGCGATCGTGGAACCCCGTTTAAGTTCACTCTTGGTCAAGGACAAGTGATCAAAGGATGGGATTTGGGTATCAAAACAATGAAGAAAAATGAAAAAGCTCTTTTTACCATTCCTCCTGATTTGGCATATGGTGAATCTGGCTCCCCACCAACCATTCCTCCTAGTGCGACATTGCAGTTCGATGTCGAGTTACTATCTTGGACAAGCGTTAAGGACATATGTAAGGATGGAGGAATATTCAAGAAGATCCTAACTGAAGGGGACAAATGGGATAATCCAAAGGACCTTGATGAAGTGCTAGTCAATTTTGAAGCTAAGCTAGAAGATGGAACACTTGTTGCAAAAGCTGATGGAGTGGAATTCACCGTTGGGGATGGTTACTTTTGCCCTGCTCTCGCAAAGGCTGTAAAAACCATGAAGATAGGTGAAAAGGCACTCCTCACAGTGAAGCCACAATATGGGTTTGGGGAGAAAGGTAAATCAGCCTCTAGTAATGAAGGTGCAGTTCCACCAAATGCATCCCTCGATATTACTTTGGAGTTGGTATCTTGGAAGACTGTTTCAGAAGTTACCCCTGACAAAAAGGTTATCAAGAAAATTCTGAAAGAAGGAGAAGGTTATGAGAAGCCAAATGACGGAGCCATTGTCAAAGTGAAATTGATTGGGAAGTTGGGAGATGGCAAGATATTTTTGAGGAAGGGATATGATGATGGTGAAGAGCCATTTGAGTTTAAAACAGACGAGGAACAAGTGATTGATGGCCTCGACAAAGCTGTGGCGACAATGAAGAAAGGTGAGATAGCCCTGCTGACAATAGCACCAGAGTATGCTTTTGGTTCGTCTGAGTCACAACAGGATTTGGCTATAGTTCCTCCAAACTCAACTGTGTATTACGAGGTTGAGCTTGTGGCTTTTGACAAGGAGAAAGAGTCATGGGATATGAATAACCAGGAAAAGATTGAAGCTGCTGGTAAAAAGAAGGAAGAAGGAAATGTGTTGTTCAAGTCTGGAAAATTTGCTAGAGCTTCCAAGAGATATGAGAAGGCTGTGAAGTTCATTGAATACGATTCTTCATTTAGTGAAGAAGAGAAAAAGCAGGCTAAGGCATTGAAAGTTGCATGCAATTTGAACAATGCAGCTTGTAAATTGAAGCTAAAGATGTACAACGAGGCAGAGAAATTGTGCACCAAGGTGCTAGAACTTGAGAGTTCAAATGTTAAGGCTCTCTATAGAAGGGCTCAAGCATATATCCAACTAGCTGACTTGGATTTAGCTGAATTTGACATCAAGAAGGCTCTCGATATCGATCCGAATAACAGGGATGTGAAATTGGAATACAAAACTCTGAAGGAGAAGGTGAAGGAATACAATAAAAAGGATGCCAAGTTTTACGGCAACATGTTTGCCAAAATGAAGAAAGTAGAATCTGCCTAA 1662 41.82 MDEDFDIPAAADMNEDLDLPDDTIALKVGEEKEIGNQGLKKKLLKEGEGWVTPENGDEVEVHYTGTLLDGTQFDSSRDRGTPFKFTLGQGQVIKGWDLGIKTMKKNEKALFTIPPDLAYGESGSPPTIPPSATLQFDVELLSWTSVKDICKDGGIFKKILTEGDKWDNPKDLDEVLVNFEAKLEDGTLVAKADGVEFTVGDGYFCPALAKAVKTMKIGEKALLTVKPQYGFGEKGKSASSNEGAVPPNASLDITLELVSWKTVSEVTPDKKVIKKILKEGEGYEKPNDGAIVKVKLIGKLGDGKIFLRKGYDDGEEPFEFKTDEEQVIDGLDKAVATMKKGEIALLTIAPEYAFGSSESQQDLAIVPPNSTVYYEVELVAFDKEKESWDMNNQEKIEAAGKKKEEGNVLFKSGKFARASKRYEKAVKFIEYDSSFSEEEKKQAKALKVACNLNNAACKLKLKMYNEAEKLCTKVLELESSNVKALYRRAQAYIQLADLDLAEFDIKKALDIDPNNRDVKLEYKTLKEKVKEYNKKDAKFYGNMFAKMKKVESA 553
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 8038959 8043065 + CrPI670011_09g008060.1 Cre09g0806 507474
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0806 553 FunFam Peptidylprolyl isomerase 262 384 - -
Cre09g0806 553 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 289 382 IPR001179 GO:0003755(InterPro)
Cre09g0806 553 Pfam Tetratricopeptide repeat 482 515 IPR019734 GO:0005515(InterPro)
Cre09g0806 553 ProSiteProfiles TPR repeat profile. 482 515 IPR019734 GO:0005515(InterPro)
Cre09g0806 553 FunFam Peptidylprolyl isomerase 148 261 - -
Cre09g0806 553 PANTHER PEPTIDYLPROLYL ISOMERASE 31 143 IPR050754 -
Cre09g0806 553 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 168 257 IPR001179 GO:0003755(InterPro)
Cre09g0806 553 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 51 141 IPR001179 GO:0003755(InterPro)
Cre09g0806 553 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 283 379 IPR001179 GO:0003755(InterPro)
Cre09g0806 553 SUPERFAMILY FKBP-like 33 148 - -
Cre09g0806 553 Gene3D - 31 147 IPR046357 GO:0003755(InterPro)
Cre09g0806 553 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 56 144 IPR001179 GO:0003755(InterPro)
Cre09g0806 553 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 172 261 IPR001179 GO:0003755(InterPro)
Cre09g0806 553 Gene3D - 262 383 IPR046357 GO:0003755(InterPro)
Cre09g0806 553 SUPERFAMILY FKBP-like 264 399 - -
Cre09g0806 553 Gene3D - 148 261 IPR046357 GO:0003755(InterPro)
Cre09g0806 553 SUPERFAMILY TPR-like 387 547 IPR011990 GO:0005515(InterPro)
Cre09g0806 553 Gene3D Tetratricopeptide repeat domain 385 542 IPR011990 GO:0005515(InterPro)
Cre09g0806 553 FunFam Peptidylprolyl isomerase 29 147 - -
Cre09g0806 553 Coils Coil 515 535 - -
Cre09g0806 553 SUPERFAMILY FKBP-like 148 264 - -
Cre09g0806 553 FunFam Peptidylprolyl isomerase 387 542 - -
Cre09g0806 553 SMART tpr_5 399 432 IPR019734 GO:0005515(InterPro)
Cre09g0806 553 SMART tpr_5 482 515 IPR019734 GO:0005515(InterPro)
Cre09g0806 553 SMART tpr_5 448 481 IPR019734 GO:0005515(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre05g0875 Cre-Chr5:7859284 Cre09g0806 Cre-Chr9:8038959 4.90E-243 dispersed
Cre07g1869 Cre-Chr7:34069656 Cre09g0806 Cre-Chr9:8038959 1.30E-10 dispersed
Cre09g0806 Cre-Chr9:8038959 Cre11g1156 Cre-Chr11:9206562 5.40E-21 dispersed
Cre09g0806 Cre-Chr9:8038959 Cre05g0922 Cre-Chr5:8436640 4.30E-18 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0806 K09571 - csv:101214513 1050.43