Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g0835 | ATGCTCTTCCAAGACGGCGTGACTTGTTTGGATTCACATGGTATAGCTATGCTATGCTCATGCTGCCCTAGAGTATCTGATGAAGGAAATCAGAAGAAGCCAAATAATCATATCGACGCCTTCCACAATGTTCTTTGTATCGGTCAGATTGTGGATCTCCTTGCTGAGGAGCCAAACTACATTAGAAAAACAAATATTAGAATTATAGTGAGTGATAAACAACTACCAAAGGAACTTCCCTTCTCTCTTTATAACCCACCAACCCTCTCTGCCTCTCTTCACAACTCTTCTCATTTCCGAGCTATGGAAAACACTAAACTTTCATTACCTCTCTTTGCTGCTTTACTCCTCACAAATGCTATTGTTGTTTTAGCCAATTCCAATGAGAATGGTGACATGAATAATAACTTGAGTGTCATAGAAAACTCATGTGCCATTACTCTTTATCCTCAACTATGTCAATCAACAATATACTCCATCGTCGGAACATCCAACTTGTTGAGTTTGAAAGATATTGTTGAAGTGTCATTGAGTGTTGCTGTTGATGCAGCTAAGCATAACTACAAAAACATCAACAAACTTTGGATGTCACTTAATGATGTTAGTAAACGAGACAAGATTGCGGTTCGTGATTGTGTGGAAACCACAGACAGGGCGATTTATGAACTTCACAAGGCCGTAGAGGATCTTCGTGAGTATCCCAACAAGAAATCTCTTACCTTGTACGCTGATGACCTCAAAACCTTTCTCAGTTCTGCCATTACTAATCAGGAGACTTGTTTGGAGGGATTGTCACATGAGAAAACAGAGAAAAGGGTGTTGAAGCTGATTGAAAGCACACATATTCACGTCACAAAGTTGTGTAGTAATACATTGGCTTTGGTTAAGAAATTGACACACACTGATTTTACAAATCAAAAAACCAATAAAATAACCGCTGACCACCCCACGATTGTACTCTTTCCCCACCATGTCGATCAGGAGGAAGGTGAGAATAGAGGAATTAGGGAGGATTTAGAAGACGGAATAAAGTGGCCAGAATGGATGGCGAGCCGTGACCGGAGGCTTTTGGAGTCATCGTACGAAGCTACGGCGGACGTGGTGGTGGCGGCGGATGGAAGTGGAAATTATAAAACGGTGTCGGAGGCGGTGGCGGCGGCGCCGAGTAAGAGCAGCAAAAGATATGTAATAAGAATAAAGGGTGGAGTTTACAGGGAAAATGTTGATGTGCCAAGTAGTAAAACCAATATTATGTTTTGGGGAGATGGAAGATCCAACACCATTATCACTGCTAGCAGAAGTGTTGGGGGTGGCAGTACAACCTTCAATTCCGCCACAGTTGCTGCTGTGGGGGATGGATTTTTAGCTCGGGACATAACCTTTCAAAACACAGCAGGAGCAGCCAATGACCAAGCTGTAGCTCTCCGTGTTGGCTCAGATCGCTCAGCCTTCTACCGTTGTGGCATGCTAGCCTACCAAGACACTCTCTACGTCCACTCGAACCGTCAGTTCTTCGTCAACTGCGTCGTTGCAGGCACAGTCGATTTCATCTTCGGAAACGCAGCAGTCGTATTCCAAAACTCCGACCTCACCCCTCGCAAACCAGGCCCTAGGCAACAGAACATGGTCACAGCACAAGGAAGAACTGACCCGAATCAAAACACGGGAATCGTGATCCAAAAGTGTAAAATAAAAGCGACGTCGGACTTGGAGCCGGTGATAAAAGAATTCCCAAGCTTCCTCGGGAGACCATGGAAGGAATATGCTAGGGTTGTGGTAATGCAAACGGACATAACCAATGTGATAGACTCAAAAGGGTGGGCGCCATGGGGTACTGAAATAAAGAAACCCTACTTTGCGGAATATGATAATAATGGAGCTGGAGCCAATACTTGTTGTAGAGTGACATGGTCTACACTTATTAATGCAGCTCAAGTTAAGACCTTTACGGCTGAACCATTCATAGATGGTGCTAATTGGCTCCCATCCACTGGCTTCCCCTATCAGCTTGGCCTCTAA | 2019 | 44.28 | MLFQDGVTCLDSHGIAMLCSCCPRVSDEGNQKKPNNHIDAFHNVLCIGQIVDLLAEEPNYIRKTNIRIIVSDKQLPKELPFSLYNPPTLSASLHNSSHFRAMENTKLSLPLFAALLLTNAIVVLANSNENGDMNNNLSVIENSCAITLYPQLCQSTIYSIVGTSNLLSLKDIVEVSLSVAVDAAKHNYKNINKLWMSLNDVSKRDKIAVRDCVETTDRAIYELHKAVEDLREYPNKKSLTLYADDLKTFLSSAITNQETCLEGLSHEKTEKRVLKLIESTHIHVTKLCSNTLALVKKLTHTDFTNQKTNKITADHPTIVLFPHHVDQEEGENRGIREDLEDGIKWPEWMASRDRRLLESSYEATADVVVAADGSGNYKTVSEAVAAAPSKSSKRYVIRIKGGVYRENVDVPSSKTNIMFWGDGRSNTIITASRSVGGGSTTFNSATVAAVGDGFLARDITFQNTAGAANDQAVALRVGSDRSAFYRCGMLAYQDTLYVHSNRQFFVNCVVAGTVDFIFGNAAVVFQNSDLTPRKPGPRQQNMVTAQGRTDPNQNTGIVIQKCKIKATSDLEPVIKEFPSFLGRPWKEYARVVVMQTDITNVIDSKGWAPWGTEIKKPYFAEYDNNGAGANTCCRVTWSTLINAAQVKTFTAEPFIDGANWLPSTGFPYQLGL | 672 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 8371939 | 8378334 | + | CrPI670011_09g008350.1 | Cre09g0835 | 507503 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g0835 | 672 | SMART | PMEI_2 | 135 | 294 | IPR006501 | GO:0004857(InterPro) | |
Cre09g0835 | 672 | FunFam | Pectinesterase | 360 | 672 | - | - | |
Cre09g0835 | 672 | FunFam | Pectinesterase | 136 | 299 | - | - | |
Cre09g0835 | 672 | NCBIfam | pectinesterase inhibitor domain | 108 | 299 | IPR006501 | GO:0004857(InterPro) | |
Cre09g0835 | 672 | SUPERFAMILY | Pectin lyase-like | 363 | 671 | IPR011050 | - | |
Cre09g0835 | 672 | PANTHER | PECTINESTERASE | 114 | 663 | - | GO:0030599(PANTHER)|GO:0046910(PANTHER) | |
Cre09g0835 | 672 | ProSitePatterns | Pectinesterase signature 1. | 391 | 410 | IPR018040 | - | |
Cre09g0835 | 672 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 136 | 300 | IPR035513 | - | |
Cre09g0835 | 672 | Gene3D | - | 360 | 672 | IPR012334 | - | |
Cre09g0835 | 672 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 139 | 299 | IPR035513 | - | |
Cre09g0835 | 672 | ProSitePatterns | Pectinesterase signature 2. | 510 | 519 | IPR033131 | - | |
Cre09g0835 | 672 | MobiDBLite | consensus disorder prediction | 529 | 550 | - | - | |
Cre09g0835 | 672 | Pfam | Pectinesterase | 366 | 657 | IPR000070 | GO:0030599(InterPro)|GO:0042545(InterPro) | |
Cre09g0835 | 672 | Pfam | Plant invertase/pectin methylesterase inhibitor | 139 | 294 | IPR006501 | GO:0004857(InterPro) | |
Cre09g0835 | 672 | CDD | PMEI-like_3 | 143 | 299 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre09g0131 | Cre-Chr9:1568871 | Cre09g0835 | Cre-Chr9:8371939 | 1.20E-175 | dispersed | |
Cre09g0835 | Cre-Chr9:8371939 | Cre09g2047 | Cre-Chr9:39579314 | 1.10E-100 | dispersed | |
Cre09g0835 | Cre-Chr9:8371939 | Cre07g1788 | Cre-Chr7:33318648 | 1.80E-183 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g0835 | K01051 | - | csv:101221055 | 867.84 |