Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cre09g0865 | ATGAGTTGCTTTCCATGTTTTTCATCTCATGGGAAAGCAGCAAGAAGAACAAAGAGTGGTAGAAAGGAACAGTCTGTTTCGTCGCATTTTCGTAGTCATAAACAACAACAACAACAACAACCGCCACCGCCGCCGCAACAACAACATCATCCGGCTCCTCCTCCTCCACGTCCTACGCCTACAGACATTCCAAAGGGAAATCAGGTTCAAAAGGAAGCAGAGAAAGAGAAAGAGAAAGAGAAAGAGAATGAGATTATTGGGGAAAAGAATAACATTGCAGCACAAACCTTCACCTTCAGAGAATTGGCCACTGCTACAAAGAATTTCCGTCAAGAATGTCTCATTGGTGAAGGAGGGTTTGGGAGAGTTTACAAAGGGAAACTCGATAAAACTAATCAGGTTGTAGCAGTGAAGCAGCTTGACAGAAATGGATTGCAAGGGAACAGAGAGTTTCTTGTGGAAGTTTTGATGCTAAGCCTTTTACACCATCAAAACCTTGTCAATCTCATTGGCTATTGTGCAGATGGGGATCAAAGACTCTTGGTCTATGAGTACATGCCTTTAGGATCTCTGGAAGATCATCTACTTGATCTTCCATATGGAAGGAAGGCATTGGATTGGGGAACAAGGATGAAAGTAGGGTTGGGAGCAGCAAAAGGGCTAGAATACTTGCATAACAAAGCCAACCCACCAGTGATATATAGAGACTTGAAATCATCAAACATACTATTGGACGGTGATTACAATGCAAAGCTGTCAGATTTTGGACTTGCAAAGCTTGGTCCTGTTGGAGACAAGTCCCATGTTTCCTCCAGAGTTATGGGAACCTATGGATATTGTGCTCCTGAGTATCAAAGAACTGGTCAACTTACTCTCAAATCTGATGTCTATAGCTTTGGCGTCGTTTTGTTGGAACTCATCACTGGCAAGAGAGTCATCGACAATACTCGTCCAGCTAAACAACAAAACTTGGTCGCTTGGGCATGCCCAATATTCAAGGAACCAGCTAGATTCAAGGAGTTGGCAGATCCTCTTCTTGGTGGAGACTTTCCTATAAGGGCTCTGAACCAAGCGATCGCGGTCGCCGCCATGTGCCTCCATGAGGAAGCGACGACCCGACCGTTGATCTGCGACGTTGTCACTGCTCTCAGCTTCTTAGGAGCAGAAGCCACAGAGTCGTCGAGGTCTTCGTCGTTAGGTGATGTACCATCACCCGTTGATGATTCCAATTTGATGAATCTATCCAAACCCATCGACTATCTTCACAATGACGAAACAGCTGAGGCACGCCAACGAGCGGTCGCCGAGGCCATGGAATGGGGTTCGTCCTCCAAGCAAAATGCTGCAGCTTCGCGCCCGGGAAGTTCTTCTTCCTTGTAA | 1380 | 45.87 | MSCFPCFSSHGKAARRTKSGRKEQSVSSHFRSHKQQQQQQPPPPPQQQHHPAPPPPRPTPTDIPKGNQVQKEAEKEKEKEKENEIIGEKNNIAAQTFTFRELATATKNFRQECLIGEGGFGRVYKGKLDKTNQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLPYGRKALDWGTRMKVGLGAAKGLEYLHNKANPPVIYRDLKSSNILLDGDYNAKLSDFGLAKLGPVGDKSHVSSRVMGTYGYCAPEYQRTGQLTLKSDVYSFGVVLLELITGKRVIDNTRPAKQQNLVAWACPIFKEPARFKELADPLLGGDFPIRALNQAIAVAAMCLHEEATTRPLICDVVTALSFLGAEATESSRSSSLGDVPSPVDDSNLMNLSKPIDYLHNDETAEARQRAVAEAMEWGSSSKQNAAASRPGSSSSL | 459 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 8651998 | 8655405 | - | CrPI670011_09g008650.1 | Cre09g0865 | 507533 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cre09g0865 | 459 | CDD | STKc_IRAK | 115 | 383 | - | - | |
Cre09g0865 | 459 | SMART | serkin_6 | 109 | 386 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g0865 | 459 | MobiDBLite | consensus disorder prediction | 38 | 62 | - | - | |
Cre09g0865 | 459 | FunFam | Serine/threonine-protein kinase PBS1 | 77 | 185 | - | - | |
Cre09g0865 | 459 | FunFam | Serine/threonine-protein kinase PBS1 | 186 | 399 | - | - | |
Cre09g0865 | 459 | Gene3D | Phosphorylase Kinase; domain 1 | 66 | 185 | - | - | |
Cre09g0865 | 459 | Pfam | Protein kinase domain | 111 | 380 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g0865 | 459 | MobiDBLite | consensus disorder prediction | 429 | 459 | - | - | |
Cre09g0865 | 459 | Gene3D | Transferase(Phosphotransferase) domain 1 | 186 | 401 | - | - | |
Cre09g0865 | 459 | SUPERFAMILY | Protein kinase-like (PK-like) | 95 | 392 | IPR011009 | - | |
Cre09g0865 | 459 | Coils | Coil | 71 | 91 | - | - | |
Cre09g0865 | 459 | MobiDBLite | consensus disorder prediction | 440 | 459 | - | - | |
Cre09g0865 | 459 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 232 | 244 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cre09g0865 | 459 | ProSiteProfiles | Protein kinase domain profile. | 109 | 386 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cre09g0865 | 459 | MobiDBLite | consensus disorder prediction | 68 | 87 | - | - | |
Cre09g0865 | 459 | SUPERFAMILY | beta-sandwich domain of Sec23/24 | 31 | 75 | - | - | |
Cre09g0865 | 459 | ProSitePatterns | Protein kinases ATP-binding region signature. | 115 | 138 | IPR017441 | GO:0005524(InterPro) | |
Cre09g0865 | 459 | PANTHER | OS07G0668900 PROTEIN | 40 | 395 | - | - | |
Cre09g0865 | 459 | MobiDBLite | consensus disorder prediction | 1 | 87 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cre03g1402 | Cre-Chr3:26290462 | Cre09g0865 | Cre-Chr9:8651998 | 2.70E-121 | dispersed | |
Cre09g0865 | Cre-Chr9:8651998 | Cre10g2179 | Cre-Chr10:36331013 | 5.30E-131 | dispersed | |
Cre09g0860 | Cre-Chr9:8585463 | Cre09g0865 | Cre-Chr9:8651998 | 9.40E-63 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
64399 | PF00069 | Pkinase | 5.50E-46 | CL0016 | Cre | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cre09g0865 | - | - | - | 0.0 |