Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0865 ATGAGTTGCTTTCCATGTTTTTCATCTCATGGGAAAGCAGCAAGAAGAACAAAGAGTGGTAGAAAGGAACAGTCTGTTTCGTCGCATTTTCGTAGTCATAAACAACAACAACAACAACAACCGCCACCGCCGCCGCAACAACAACATCATCCGGCTCCTCCTCCTCCACGTCCTACGCCTACAGACATTCCAAAGGGAAATCAGGTTCAAAAGGAAGCAGAGAAAGAGAAAGAGAAAGAGAAAGAGAATGAGATTATTGGGGAAAAGAATAACATTGCAGCACAAACCTTCACCTTCAGAGAATTGGCCACTGCTACAAAGAATTTCCGTCAAGAATGTCTCATTGGTGAAGGAGGGTTTGGGAGAGTTTACAAAGGGAAACTCGATAAAACTAATCAGGTTGTAGCAGTGAAGCAGCTTGACAGAAATGGATTGCAAGGGAACAGAGAGTTTCTTGTGGAAGTTTTGATGCTAAGCCTTTTACACCATCAAAACCTTGTCAATCTCATTGGCTATTGTGCAGATGGGGATCAAAGACTCTTGGTCTATGAGTACATGCCTTTAGGATCTCTGGAAGATCATCTACTTGATCTTCCATATGGAAGGAAGGCATTGGATTGGGGAACAAGGATGAAAGTAGGGTTGGGAGCAGCAAAAGGGCTAGAATACTTGCATAACAAAGCCAACCCACCAGTGATATATAGAGACTTGAAATCATCAAACATACTATTGGACGGTGATTACAATGCAAAGCTGTCAGATTTTGGACTTGCAAAGCTTGGTCCTGTTGGAGACAAGTCCCATGTTTCCTCCAGAGTTATGGGAACCTATGGATATTGTGCTCCTGAGTATCAAAGAACTGGTCAACTTACTCTCAAATCTGATGTCTATAGCTTTGGCGTCGTTTTGTTGGAACTCATCACTGGCAAGAGAGTCATCGACAATACTCGTCCAGCTAAACAACAAAACTTGGTCGCTTGGGCATGCCCAATATTCAAGGAACCAGCTAGATTCAAGGAGTTGGCAGATCCTCTTCTTGGTGGAGACTTTCCTATAAGGGCTCTGAACCAAGCGATCGCGGTCGCCGCCATGTGCCTCCATGAGGAAGCGACGACCCGACCGTTGATCTGCGACGTTGTCACTGCTCTCAGCTTCTTAGGAGCAGAAGCCACAGAGTCGTCGAGGTCTTCGTCGTTAGGTGATGTACCATCACCCGTTGATGATTCCAATTTGATGAATCTATCCAAACCCATCGACTATCTTCACAATGACGAAACAGCTGAGGCACGCCAACGAGCGGTCGCCGAGGCCATGGAATGGGGTTCGTCCTCCAAGCAAAATGCTGCAGCTTCGCGCCCGGGAAGTTCTTCTTCCTTGTAA 1380 45.87 MSCFPCFSSHGKAARRTKSGRKEQSVSSHFRSHKQQQQQQPPPPPQQQHHPAPPPPRPTPTDIPKGNQVQKEAEKEKEKEKENEIIGEKNNIAAQTFTFRELATATKNFRQECLIGEGGFGRVYKGKLDKTNQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLPYGRKALDWGTRMKVGLGAAKGLEYLHNKANPPVIYRDLKSSNILLDGDYNAKLSDFGLAKLGPVGDKSHVSSRVMGTYGYCAPEYQRTGQLTLKSDVYSFGVVLLELITGKRVIDNTRPAKQQNLVAWACPIFKEPARFKELADPLLGGDFPIRALNQAIAVAAMCLHEEATTRPLICDVVTALSFLGAEATESSRSSSLGDVPSPVDDSNLMNLSKPIDYLHNDETAEARQRAVAEAMEWGSSSKQNAAASRPGSSSSL 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8651998 8655405 - CrPI670011_09g008650.1 Cre09g0865 507533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0865 459 CDD STKc_IRAK 115 383 - -
Cre09g0865 459 SMART serkin_6 109 386 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g0865 459 MobiDBLite consensus disorder prediction 38 62 - -
Cre09g0865 459 FunFam Serine/threonine-protein kinase PBS1 77 185 - -
Cre09g0865 459 FunFam Serine/threonine-protein kinase PBS1 186 399 - -
Cre09g0865 459 Gene3D Phosphorylase Kinase; domain 1 66 185 - -
Cre09g0865 459 Pfam Protein kinase domain 111 380 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g0865 459 MobiDBLite consensus disorder prediction 429 459 - -
Cre09g0865 459 Gene3D Transferase(Phosphotransferase) domain 1 186 401 - -
Cre09g0865 459 SUPERFAMILY Protein kinase-like (PK-like) 95 392 IPR011009 -
Cre09g0865 459 Coils Coil 71 91 - -
Cre09g0865 459 MobiDBLite consensus disorder prediction 440 459 - -
Cre09g0865 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cre09g0865 459 ProSiteProfiles Protein kinase domain profile. 109 386 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g0865 459 MobiDBLite consensus disorder prediction 68 87 - -
Cre09g0865 459 SUPERFAMILY beta-sandwich domain of Sec23/24 31 75 - -
Cre09g0865 459 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524(InterPro)
Cre09g0865 459 PANTHER OS07G0668900 PROTEIN 40 395 - -
Cre09g0865 459 MobiDBLite consensus disorder prediction 1 87 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre03g1402 Cre-Chr3:26290462 Cre09g0865 Cre-Chr9:8651998 2.70E-121 dispersed
Cre09g0865 Cre-Chr9:8651998 Cre10g2179 Cre-Chr10:36331013 5.30E-131 dispersed
Cre09g0860 Cre-Chr9:8585463 Cre09g0865 Cre-Chr9:8651998 9.40E-63 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64399 PF00069 Pkinase 5.50E-46 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0865 - - - 0.0