Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cre09g0878 ATGGCGATTCTGAAGCTTTTTTCTCTCTGCATTTTCTTCTTCTTATTGATCAGAGCCCCTGTACGATGTGATTCCTTACATTTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTGATGTTCAGCTTCTTTTGGGAAAGATCAGAGCTTCACTTGAAGGAGACACTCAAAACTTGCTTTTGTCTTCATGGAATTACTCTCTGCCTCTTTGTCAATGGAGGGGACTCAAATGGGTCTTCTCTACTGGAACTCCACTGGTCTGCAGTGATTCTTCTTCTCCACAGTGGTCTAATCTCACTCTTTTCAAAGACCCTTCTCTTCATGTTCTCTCTTTGCAACTTCCATCTGCTAATCTCACTGGTTCGTTGCCCAAGGAGCTTGGTGAGTTCACTATGCTCCAAAGCCTCTATCTAAGTATAAACTCTTTGACTGGAACCATTCCACTTGAACTTGGTTACAGCTCCTCTCTTTCTGACATTGATTTGAGTAGCAATCTTTTGACTGGAGCTCTTCCACCCTCGATCTGGAATCTGTGTGAGAAACTTGTTTCTGTCAGACTACATGGCAATTCATTATCTGGGTCACTGCCGGAGCCGGCTTTACCAAACTCCACCTGCAAGAATTTGGAAGCTTTGGATTTGGGCAACAATCAGATTTCAGGTACTTTCCCAGAATTCATTACTAGATTTCAGGGTCTGAAAGAGCTTGATCTTGGGAAAAATTTGTTGTCTGGACAAATCCCTCAGAGCTTAGGCCAGTTAGAGCTGGAGAAGTTGAACCTTTCAAACAACAATTTCAGTGGAATATTGCCTGTTTTTAGTAACTCAAAGTTTGGTGTTGAGGCTTTTGAAGGGAATAGTCCTGGGCTTTGTGGGGAGCCTTTGAAAAGCTGTGCAGGACCTTCTCATTTGAGTTCAGGTGCCATTGCTGGCCTTGTTATCGGCTTGATGACTGGGACGGTGGTTTTAGCTTCGTTGCTTATTGGCTATATGCAAAACAAGAAGAAGAAGAGTATGAGTGAGAGTGAAGATGAGATTGACGAAGGAGAAGATGAAGAGAATGGTGGCAGTATCGGTGCAGGCGGTGAAGGAAAGCTCATTTTGTTTCAGGGTGGTGAGCATCTGACATTGGATGATGTCTTGAATGCTACAGGGCAAGTTATGGAAAAAACAAGCTATGGCACTATATATAAGGCGAAGCTTGCTGATGGAGGCACCATTGCTCTGAGATTGCTGAGGGAAGGTAGTTGCAAAGACAGAAATTCTTGTTTGTCTGTGATTAAACAGTTGGGAAAGATTCGCCATGAGAACTTGATTCCTTTGAGAGCTTTCTATCAGGGAAAGAGAGGAGAGAAGCTCCTTATTTATGACTATCTGCCTATCAGAACTTTACATGATTTTCTACATGAATCTAGAGCAGGAAAACCAGTGTTGAACTGGGCTAGGAGGCACAAGATTGCCTTAGGCATCGCCCGGGGACTAGCGCATCTTCACACAGGTCTTGAAGTGCCCATTACACATGGCAACGTTAGATCAAAAAATGTGCTTGTGGATGACTTCTTTGCAGCGAGACTGACGGAGTTTGGGCTCGACAAGCTAATGATCCCATCGGTAGCTGACGAAATCGTCTCGCTTGCAAAATCAGATGGGTACAAGGCACCGGAGCTGCAACGGATGAAGAAATGCAATTCGAGAACAGATGTGTATGCATTTGGAATCTTGCTATTGGAAATTCTGATTGGGAAGAAACCGGGAAAAAGTGGAAGAAATGGAGAGTTTGTGGATCTGCCATCAATGGTGAAAGTGGCAGTTTTAGAGGAAACAACAATGGAGGTTTTCGATGTGGAGGTTTTGAAAGGGATTAGAAGTCCCATGGAAGATGGAATTGTTCAAGCATTGAAGCTTGCAATGGGCTGCTGTGCTCCAGTGGCTTCAGTAAGACCCTCCATGGATGAAGTTGTGAAGCAGTTGGAAGAGAACAGACCAAGAAACAGATCTGCTCTGTACAGCCCAACAGAAACAAGAAGTGAGATTGGTACCCCATTTTGA 2073 43.61 MAILKLFSLCIFFFLLIRAPVRCDSLHFLSSSSSSSSSSSSSSSSSFDVQLLLGKIRASLEGDTQNLLLSSWNYSLPLCQWRGLKWVFSTGTPLVCSDSSSPQWSNLTLFKDPSLHVLSLQLPSANLTGSLPKELGEFTMLQSLYLSINSLTGTIPLELGYSSSLSDIDLSSNLLTGALPPSIWNLCEKLVSVRLHGNSLSGSLPEPALPNSTCKNLEALDLGNNQISGTFPEFITRFQGLKELDLGKNLLSGQIPQSLGQLELEKLNLSNNNFSGILPVFSNSKFGVEAFEGNSPGLCGEPLKSCAGPSHLSSGAIAGLVIGLMTGTVVLASLLIGYMQNKKKKSMSESEDEIDEGEDEENGGSIGAGGEGKLILFQGGEHLTLDDVLNATGQVMEKTSYGTIYKAKLADGGTIALRLLREGSCKDRNSCLSVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPIRTLHDFLHESRAGKPVLNWARRHKIALGIARGLAHLHTGLEVPITHGNVRSKNVLVDDFFAARLTEFGLDKLMIPSVADEIVSLAKSDGYKAPELQRMKKCNSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSMVKVAVLEETTMEVFDVEVLKGIRSPMEDGIVQALKLAMGCCAPVASVRPSMDEVVKQLEENRPRNRSALYSPTETRSEIGTPF 690
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 8779490 8782049 - CrPI670011_09g008780.1 Cre09g0878 507546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cre09g0878 690 Gene3D Phosphorylase Kinase; domain 1 375 466 - -
Cre09g0878 690 MobiDBLite consensus disorder prediction 671 690 - -
Cre09g0878 690 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 109 204 - -
Cre09g0878 690 Coils Coil 340 360 - -
Cre09g0878 690 ProSiteProfiles Protein kinase domain profile. 390 690 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cre09g0878 690 Pfam Leucine rich repeat 216 274 IPR001611 GO:0005515(InterPro)
Cre09g0878 690 SUPERFAMILY Protein kinase-like (PK-like) 395 666 IPR011009 -
Cre09g0878 690 SUPERFAMILY L domain-like 62 281 - -
Cre09g0878 690 Pfam Leucine Rich Repeat 141 160 IPR001611 GO:0005515(InterPro)
Cre09g0878 690 Pfam Leucine Rich Repeat 164 186 IPR001611 GO:0005515(InterPro)
Cre09g0878 690 Gene3D Ribonuclease Inhibitor 209 307 IPR032675 -
Cre09g0878 690 Gene3D Ribonuclease Inhibitor 48 208 IPR032675 -
Cre09g0878 690 Gene3D Transferase(Phosphotransferase) domain 1 468 683 - -
Cre09g0878 690 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 119 672 IPR052451 -
Cre09g0878 690 FunFam Leucine-rich repeat receptor-like protein kinase 214 306 - -
Cre09g0878 690 MobiDBLite consensus disorder prediction 670 690 - -
Cre09g0878 690 MobiDBLite consensus disorder prediction 346 367 - -
Cre09g0878 690 Pfam Protein tyrosine and serine/threonine kinase 394 665 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cre07g2031 Cre-Chr7:35904775 Cre09g0878 Cre-Chr9:8779490 7.20E-59 dispersed
Cre09g0878 Cre-Chr9:8779490 Cre10g2345 Cre-Chr10:37620307 1.40E-66 dispersed
Cre04g1994 Cre-Chr4:37315942 Cre09g0878 Cre-Chr9:8779490 6.90E-34 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
64400 PF07714 PK_Tyr_Ser-Thr 2.80E-25 CL0016 Cre PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cre09g0878 - - - 0.0